HHsearch alignment for GI: 254780865 and conserved domain: MTH00206
>MTH00206 ND4 NADH dehydrogenase subunit 4; Provisional.
Probab=100.00 E-value=0 Score=594.53 Aligned_cols=441 Identities=19% Similarity=0.303 Sum_probs=360.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEEEHH
Q ss_conf 99999999999999730124214789999999999999999999997258985289997531013088223577874337
Q gi|254780865|r 7 VIVFLPLIGAVFSGFFGRLMGKQFADIFTSLLMVIGAFLSWYVFYEIGFGHDVQVVKREIFPWIIFDGLDIPWGLRIDTL 86 (666)
Q Consensus 7 l~~~~Pl~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~~~~D~l 86 (666)
T Consensus 2 L~iiip~~~~~~~~~~~~~---~~~w~~~~~~~~~~~~~~~~~~---~~~----------~~~~-----~~~~~~~~D~l 60 (452)
T MTH00206 2 LKLILPYVMLIPMVLLCKK---KWLWRSTYVSSLLLALLVLLLW---SMN----------MSWS-----SPNSYLSIDQV 60 (452)
T ss_pred HHHHHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHHHHHHHHH---HCC----------CCCC-----HHHHHHHHHHH
T ss_conf 5489999999999998276---9999999999999999999987---237----------7701-----03378855575
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf 899999999999999999747530688866--189999999999999998655899998888885688998876203445
Q gi|254780865|r 87 SSVMFVVVNSISAVVHIYSIGYMHDDPHRP--RFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKES 164 (666)
Q Consensus 87 s~~~~~~~~~i~~~~~~ys~~y~~~~~~~~--~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~~ 164 (666)
T Consensus 61 S~~l~~L~~~i~~l~~l~S~~~~~~~~~~~~~~f~~l~~~l~~~l~~~f~s~nl~~ffvf~E~~lip~~~LI~~wg~~~~ 140 (452)
T MTH00206 61 SAPLVILSCWLLPLMLLASQQHMKKEPGSRQRIYIFCLIFLQLFLILAFLATDLLLFYIAFEATLIPTLLLITRWGAQKE 140 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 79999999999999999989987408312789999999999999999999979999999999999999999997099889
Q ss_pred HHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 41036300022122478999999999999620598999987543100012455556666666653202455317999999
Q gi|254780865|r 165 AIKASMKAFVVNRIGDLGLILAISAIIYLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIICL 244 (666)
Q Consensus 165 ~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (666)
T Consensus 141 r~~A~~~~~i~t~~gs~~lL~~i~~l~~~~gs~~~~~~~~~~~~----------------------------~~~~~~~~ 192 (452)
T MTH00206 141 RLQAGTYFLFYTLVGSLPLLIALLKLYNSLGSLSMPIILENLSS----------------------------YSDNFWWL 192 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH----------------------------HHHHHHHH
T ss_conf 99999999999999999999999999988271489999988466----------------------------68999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCHH-CCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999865433432343124000-023322100013456666777999963013-5781344445677777887630011
Q gi|254780865|r 245 LFFLGAMGKSAQLLLHVWLPDAM-EGPTPVSALIHAATMVTAGVFLVARMSPLF-ELSPFVLDCITVLGCITAFFAATVG 322 (666)
Q Consensus 245 l~~~g~~~K~a~~P~h~WLp~A~-~aPtpvSAllhs~~mv~~Gvy~l~r~~~~~-~~~~~~~~~~~~~g~~t~~~g~~~a 322 (666)
T Consensus 193 ~~~l~f~vK~~~~pfH~WLP~Ah~eAP~~~S~iL-agvllK~G~ygliR~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~a 271 (452)
T MTH00206 193 ACLLAFLVKLPLYGLHLWLPKAHVEAPIAGSMVL-AGVLLKLGGYGMMRLSQLLGPSTKLSSEPFLILGLWGMIVTSSIC 271 (452)
T ss_pred HHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999998786100106877788980999999-999999999999999871243158999999999999999999999
Q ss_pred HCCCCCHHHHHHHHHCCCCCCCCCCCCC---CCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 1024520244321000135334456553---1110034655531000122221012321110000110127761546699
Q gi|254780865|r 323 LVQHDIKRVIAYSTCSQLGYMFVALGCR---AYGASIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRT 399 (666)
Q Consensus 323 l~q~d~Kr~lAySsis~~G~i~~~~g~~---~~~~a~~~~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl~~~~P~~ 399 (666)
T Consensus 272 l~Q~DlKrllAYSSishmG~i~~gl~~~~~~g~~gal~~mi~Hgl~~~~LF~~~g~-i~~~~~tr~i~~~~GL~~~~P~~ 350 (452)
T MTH00206 272 LRQTDLKSLIAYSSVSHMGLVAAGIMSGTPWGFSGALMLMIAHGLVSSALFCLANL-LYERSHTRTLLLNRGLQSIFPLM 350 (452)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCHHHHHHCHHHHHHHH
T ss_conf 98733789999967999999999997378888888899889999999999999889-99334980299984558778999
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
Q ss_conf 99999886421011000000002443217888888986410244444210221134543331034245787443321000
Q gi|254780865|r 400 CWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSSHFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKMRVDKDISH 479 (666)
Q Consensus 400 ~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~~~~~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~~~~~~~~ 479 (666)
T Consensus 351 ~~~~~i~~ls~~GiP------p~~gF~se~~i~~~~~~~~~--~~~~~~~~~~~lsa~Y~l~l~~~~~~G~~~~---~~~ 419 (452)
T MTH00206 351 SFWWLLMFLANLALP------PSINFFGELLIISSLFSWSN--WTILLLGLGVLLTAVYSLYMFVMTQHGPTSK---HLK 419 (452)
T ss_pred HHHHHHHHHHHHHHH------HHCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCC
T ss_conf 999999999987331------20539999999999999849--9999999999999999999999998599931---251
Q ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 000135533320245656663210000012
Q gi|254780865|r 480 KIHESPLVMQIPLFILAIGSIFFGFIFHDV 509 (666)
Q Consensus 480 ~~~e~~~~m~~pl~vLa~~si~~G~~~~~~ 509 (666)
T Consensus 420 ~~~~~~~~e~~~~~~~~~p~~~l~~~p~~~ 449 (452)
T MTH00206 420 NLSPSTTREHLLLFLHLLPYILLILFPELI 449 (452)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 489983779999999999999999847986