HHsearch alignment for GI: 254780865 and conserved domain: MTH00206

>MTH00206 ND4 NADH dehydrogenase subunit 4; Provisional.
Probab=100.00  E-value=0  Score=594.53  Aligned_cols=441  Identities=19%  Similarity=0.303  Sum_probs=360.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEEEHH
Q ss_conf             99999999999999730124214789999999999999999999997258985289997531013088223577874337
Q gi|254780865|r    7 VIVFLPLIGAVFSGFFGRLMGKQFADIFTSLLMVIGAFLSWYVFYEIGFGHDVQVVKREIFPWIIFDGLDIPWGLRIDTL   86 (666)
Q Consensus         7 l~~~~Pl~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~~~~D~l   86 (666)
T Consensus         2 L~iiip~~~~~~~~~~~~~---~~~w~~~~~~~~~~~~~~~~~~---~~~----------~~~~-----~~~~~~~~D~l   60 (452)
T MTH00206          2 LKLILPYVMLIPMVLLCKK---KWLWRSTYVSSLLLALLVLLLW---SMN----------MSWS-----SPNSYLSIDQV   60 (452)
T ss_pred             HHHHHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHHHHHHHHH---HCC----------CCCC-----HHHHHHHHHHH
T ss_conf             5489999999999998276---9999999999999999999987---237----------7701-----03378855575


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf             899999999999999999747530688866--189999999999999998655899998888885688998876203445
Q gi|254780865|r   87 SSVMFVVVNSISAVVHIYSIGYMHDDPHRP--RFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKES  164 (666)
Q Consensus        87 s~~~~~~~~~i~~~~~~ys~~y~~~~~~~~--~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~~  164 (666)
T Consensus        61 S~~l~~L~~~i~~l~~l~S~~~~~~~~~~~~~~f~~l~~~l~~~l~~~f~s~nl~~ffvf~E~~lip~~~LI~~wg~~~~  140 (452)
T MTH00206         61 SAPLVILSCWLLPLMLLASQQHMKKEPGSRQRIYIFCLIFLQLFLILAFLATDLLLFYIAFEATLIPTLLLITRWGAQKE  140 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf             79999999999999999989987408312789999999999999999999979999999999999999999997099889


Q ss_pred             HHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf             41036300022122478999999999999620598999987543100012455556666666653202455317999999
Q gi|254780865|r  165 AIKASMKAFVVNRIGDLGLILAISAIIYLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIICL  244 (666)
Q Consensus       165 ~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (666)
T Consensus       141 r~~A~~~~~i~t~~gs~~lL~~i~~l~~~~gs~~~~~~~~~~~~----------------------------~~~~~~~~  192 (452)
T MTH00206        141 RLQAGTYFLFYTLVGSLPLLIALLKLYNSLGSLSMPIILENLSS----------------------------YSDNFWWL  192 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH----------------------------HHHHHHHH
T ss_conf             99999999999999999999999999988271489999988466----------------------------68999999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCHH-CCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999865433432343124000-023322100013456666777999963013-5781344445677777887630011
Q gi|254780865|r  245 LFFLGAMGKSAQLLLHVWLPDAM-EGPTPVSALIHAATMVTAGVFLVARMSPLF-ELSPFVLDCITVLGCITAFFAATVG  322 (666)
Q Consensus       245 l~~~g~~~K~a~~P~h~WLp~A~-~aPtpvSAllhs~~mv~~Gvy~l~r~~~~~-~~~~~~~~~~~~~g~~t~~~g~~~a  322 (666)
T Consensus       193 ~~~l~f~vK~~~~pfH~WLP~Ah~eAP~~~S~iL-agvllK~G~ygliR~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~a  271 (452)
T MTH00206        193 ACLLAFLVKLPLYGLHLWLPKAHVEAPIAGSMVL-AGVLLKLGGYGMMRLSQLLGPSTKLSSEPFLILGLWGMIVTSSIC  271 (452)
T ss_pred             HHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999998786100106877788980999999-999999999999999871243158999999999999999999999


Q ss_pred             HCCCCCHHHHHHHHHCCCCCCCCCCCCC---CCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             1024520244321000135334456553---1110034655531000122221012321110000110127761546699
Q gi|254780865|r  323 LVQHDIKRVIAYSTCSQLGYMFVALGCR---AYGASIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRT  399 (666)
Q Consensus       323 l~q~d~Kr~lAySsis~~G~i~~~~g~~---~~~~a~~~~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl~~~~P~~  399 (666)
T Consensus       272 l~Q~DlKrllAYSSishmG~i~~gl~~~~~~g~~gal~~mi~Hgl~~~~LF~~~g~-i~~~~~tr~i~~~~GL~~~~P~~  350 (452)
T MTH00206        272 LRQTDLKSLIAYSSVSHMGLVAAGIMSGTPWGFSGALMLMIAHGLVSSALFCLANL-LYERSHTRTLLLNRGLQSIFPLM  350 (452)
T ss_pred             HHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCHHHHHHCHHHHHHHH
T ss_conf             98733789999967999999999997378888888899889999999999999889-99334980299984558778999


Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
Q ss_conf             99999886421011000000002443217888888986410244444210221134543331034245787443321000
Q gi|254780865|r  400 CWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSSHFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKMRVDKDISH  479 (666)
Q Consensus       400 ~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~~~~~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~~~~~~~~  479 (666)
T Consensus       351 ~~~~~i~~ls~~GiP------p~~gF~se~~i~~~~~~~~~--~~~~~~~~~~~lsa~Y~l~l~~~~~~G~~~~---~~~  419 (452)
T MTH00206        351 SFWWLLMFLANLALP------PSINFFGELLIISSLFSWSN--WTILLLGLGVLLTAVYSLYMFVMTQHGPTSK---HLK  419 (452)
T ss_pred             HHHHHHHHHHHHHHH------HHCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCC
T ss_conf             999999999987331------20539999999999999849--9999999999999999999999998599931---251


Q ss_pred             HHCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             000135533320245656663210000012
Q gi|254780865|r  480 KIHESPLVMQIPLFILAIGSIFFGFIFHDV  509 (666)
Q Consensus       480 ~~~e~~~~m~~pl~vLa~~si~~G~~~~~~  509 (666)
T Consensus       420 ~~~~~~~~e~~~~~~~~~p~~~l~~~p~~~  449 (452)
T MTH00206        420 NLSPSTTREHLLLFLHLLPYILLILFPELI  449 (452)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             489983779999999999999999847986