HHsearch alignment for GI: 254780865 and conserved domain: PRK02546

>PRK02546 NAD(P)H-quinone oxidoreductase subunit 4; Provisional.
Probab=100.00  E-value=0  Score=702.50  Aligned_cols=468  Identities=21%  Similarity=0.319  Sum_probs=397.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEEE
Q ss_conf             98999999999999997301242147899999999999999999999972589852899975310130882235778743
Q gi|254780865|r    5 YEVIVFLPLIGAVFSGFFGRLMGKQFADIFTSLLMVIGAFLSWYVFYEIGFGHDVQVVKREIFPWIIFDGLDIPWGLRID   84 (666)
Q Consensus         5 ~~l~~~~Pl~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~~~~D   84 (666)
T Consensus        12 LsllI~lPLlgalli~~l~~~~~~~~~~~~al~~~l~~~~l~l~~~~~~~~~~~~~~q~~~~~~Wip--~lgi~~~lgvD   89 (531)
T PRK02546         12 LTTIILFPIVAALLIPFIPDKGDGKTVRWYALIVGLIDFLITVAAFYTGYDPSNPGLQLVESYSWLP--QLGLTWSVGAD   89 (531)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC--CCCEEEEEEEH
T ss_conf             9999999999999999976036318899999999999999999999998288888748999853047--66717998525


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf             37899999999999999999747530688866189999999999999998655899998888885688998876203445
Q gi|254780865|r   85 TLSSVMFVVVNSISAVVHIYSIGYMHDDPHRPRFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKES  164 (666)
Q Consensus        85 ~ls~~~~~~~~~i~~~~~~ys~~y~~~~~~~~~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~~  164 (666)
T Consensus        90 glSl~lvlLt~~l~~l~~l~s~~~---~~~~~~f~~l~L~~~~~m~gvf~a~Dl~~fyvf~E~~~i~sy~LIg~~g~~-~  165 (531)
T PRK02546         90 GLSMPLILLTGFITTLAVLAAWPV---TFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGK-K  165 (531)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-H
T ss_conf             668999999999999999740544---666309999999999999999998079999999999999999999980989-9


Q ss_pred             HHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf             41036300022122478999999999999620598999987543100012455556666666653202455317999999
Q gi|254780865|r  165 AIKASMKAFVVNRIGDLGLILAISAIIYLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIICL  244 (666)
Q Consensus       165 ~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (666)
T Consensus       166 ~~~Aa~k~~l~t~~gs~~lL~~~~~l~~~~g~~~f~~~~l~~-------------------------~~~~~~~~~~~~~  220 (531)
T PRK02546        166 RQYAATKFILYTAGSSLFILLAALAMAFYGDTPSFDMTHLAA-------------------------KDFGLGFQLLCYA  220 (531)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-------------------------HCCCHHHHHHHHH
T ss_conf             999999999999777999999999999984873799999985-------------------------4356279999999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCHH-CCCCCCCCCHHHHHHHHHHHHHHHHHH-CCCC-CCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999865433432343124000-023322100013456666777999963-0135-78134444567777788763001
Q gi|254780865|r  245 LFFLGAMGKSAQLLLHVWLPDAM-EGPTPVSALIHAATMVTAGVFLVARMS-PLFE-LSPFVLDCITVLGCITAFFAATV  321 (666)
Q Consensus       245 l~~~g~~~K~a~~P~h~WLp~A~-~aPtpvSAllhs~~mv~~Gvy~l~r~~-~~~~-~~~~~~~~~~~~g~~t~~~g~~~  321 (666)
T Consensus       221 ~~li~f~vK~~~fP~H~WLPdA~~~aPt~~S~ll-agvl~K~G~Y~liR~~~~l~p~~~~~~~~~l~~lg~itii~gal~  299 (531)
T PRK02546        221 GLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLL-AGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALT  299 (531)
T ss_pred             HHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999850103451266888778990678888-899998744534998776412578887259999999999999999


Q ss_pred             HHCCCCCHHHHHHHHHCCCCCCCCCCCCC---CCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             11024520244321000135334456553---111003465553100012222101232111000011012776154669
Q gi|254780865|r  322 GLVQHDIKRVIAYSTCSQLGYMFVALGCR---AYGASIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPR  398 (666)
Q Consensus       322 al~q~d~Kr~lAySsis~~G~i~~~~g~~---~~~~a~~~~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl~~~~P~  398 (666)
T Consensus       300 Al~Q~DiKrllAYSSIshmG~i~lGi~~~~~~g~~Gai~~~~~H~~~ka~LFl~~G~i-~~r~gt~~i~~lgGL~~~mP~  378 (531)
T PRK02546        300 SFAQRNLKRKIAYSSISHMGFVLIGIGSFSDLGTSGAMLQMISHGLIGASLFFLVGAT-YDRTHTLMLDEMGGVGQKMRK  378 (531)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCEEHHHHCCHHHHHHH
T ss_conf             9987338999999999999999999997159999999999999999999999998189-997396167871886877559


Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             99999988642101100000000244321788888898641024-----4444210221134543331034245787443
Q gi|254780865|r  399 TCWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSSHFT-----FVFFLLLFAAFLTSFYSWRLMFLTFFGKMRV  473 (666)
Q Consensus       399 ~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~~~~~-----~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~~  473 (666)
T Consensus       379 ~~~~f~i~~la~~GlP------~~~GF~sk~lil~G~~~~~~~~~~~~~~~~~~a~~g~vl~a~Y~l~~~~rvf~G~~~~  452 (531)
T PRK02546        379 MFAMWTACSLASLALP------GMSGFVAELMVFVGFATDDAYTLPFRVVVVFLAAIGVILTPIYLLSMLREIFFGKENK  452 (531)
T ss_pred             HHHHHHHHHHHHHHCC------CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             9999999999987342------0260999999997221045431069999999999999999999999999997599985


Q ss_pred             CCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf             32100000013553332024565666321000001246
Q gi|254780865|r  474 DKDISHKIHESPLVMQIPLFILAIGSIFFGFIFHDVFF  511 (666)
Q Consensus       474 ~~~~~~~~~e~~~~m~~pl~vLa~~si~~G~~~~~~~~  511 (666)
T Consensus       453 ~~~~~~~~~dl~~rE~~~~~~l~~~~~~~G~yP~~~l~  490 (531)
T PRK02546        453 ELVSHENLVDAEPREVYIIACLLVPIIGIGLYPKLVTQ  490 (531)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf             43434568788788999999999999999758899870