HHsearch alignment for GI: 254780865 and conserved domain: PRK06277
>PRK06277 hydrogenase subunit F; Validated.
Probab=100.00 E-value=0 Score=640.76 Aligned_cols=459 Identities=19% Similarity=0.266 Sum_probs=374.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEE
Q ss_conf 92079899999999999999730124214789999999999999999999997258985289997531013088223577
Q gi|254780865|r 1 MAMIYEVIVFLPLIGAVFSGFFGRLMGKQFADIFTSLLMVIGAFLSWYVFYEIGFGHDVQVVKREIFPWIIFDGLDIPWG 80 (666)
Q Consensus 1 M~~l~~l~~~~Pl~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~ 80 (666)
T Consensus 1 m~lL~-l~v~~Pl~~a~li~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----------~~~~~~~~~~~i~ 67 (479)
T PRK06277 1 MNLLP-LMVVFPMICAIIFNLLHGK--DKLIKPLTLLTAILLPILPFIGSYGIYFFG----------GHGPENGLHSGIT 67 (479)
T ss_pred CCHHH-HHHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----------CCHHHHCCCCCCE
T ss_conf 97689-9999999999999996795--589999999999999999999998877255----------4106540356701
Q ss_pred EEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 87433789999999999999999974753068886618999999999999999865589999888888568899887620
Q gi|254780865|r 81 LRIDTLSSVMFVVVNSISAVVHIYSIGYMHDDPHRPRFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWS 160 (666)
Q Consensus 81 ~~~D~ls~~~~~~~~~i~~~~~~ys~~y~~~~~~~~~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~ 160 (666)
T Consensus 68 ~~~d~l~~~~~~~~~l~~~l~~~~~~---~~~~~~~~f~~l~l~~~~~~~g~~~s~dl~~~fvf~E~~~i~sy~Li~~~- 143 (479)
T PRK06277 68 YLYGPAKQLIITVLMLIASLVLITGL---GEKKSSGLYVALMLMGLASVSAIVLADDIFNIYVFFEIAAIAQVGLVIAS- 143 (479)
T ss_pred EEECHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_conf 04530669999999999999999995---10346788999999999999999999789999999999999999999977-
Q ss_pred CCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 34454103630002212247899999999999962059899998754310001245555666666665320245531799
Q gi|254780865|r 161 FKESAIKASMKAFVVNRIGDLGLILAISAIIYLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIA 240 (666)
Q Consensus 161 ~~~~~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (666)
T Consensus 144 ~~~~~~~aa~ky~i~~~~gs~~~L~gi~~ly~~tgs~~~~~~~~~~~~~~------------------------~~~~~~ 199 (479)
T PRK06277 144 GTEKAYRTALKYMILGNVAGSILLLGIAFLLAATGTLNISDMHNFLLNNP------------------------TTPTIY 199 (479)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC------------------------CHHHHH
T ss_conf 98999999999999999999999999999999967957999999987196------------------------408999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHH-CCCCCCCCCHHHHHHHHHHHHHHHHHHCCC---CCCHHHHHHHHHHHHHHHH
Q ss_conf 999999999865433432343124000-023322100013456666777999963013---5781344445677777887
Q gi|254780865|r 241 IICLLFFLGAMGKSAQLLLHVWLPDAM-EGPTPVSALIHAATMVTAGVFLVARMSPLF---ELSPFVLDCITVLGCITAF 316 (666)
Q Consensus 241 ~~~~l~~~g~~~K~a~~P~h~WLp~A~-~aPtpvSAllhs~~mv~~Gvy~l~r~~~~~---~~~~~~~~~~~~~g~~t~~ 316 (666)
T Consensus 200 ~~~~ll~~g~~~K~~l~PfH~Wlpday~~ap~~~salLs~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~tii 278 (479)
T PRK06277 200 GGLLMLIIGLLYGSGLPPFHTVKADIYAKAKPFGSALLQTYSKFVLVALM-LVIFKLFGGLSYFASAQGVLIALSVLAMV 278 (479)
T ss_pred HHHHHHHHHHHHHHHHHCHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999998742342140334076867999999999999999999-99999702244468999999999999999
Q ss_pred HHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCC---CCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6300111024520244321000135334456553---1110034655531000122221012321110000110127761
Q gi|254780865|r 317 FAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCR---AYGASIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLY 393 (666)
Q Consensus 317 ~g~~~al~q~d~Kr~lAySsis~~G~i~~~~g~~---~~~~a~~~~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl~ 393 (666)
T Consensus 279 ~g~l~Al~Q~dlKrllAYSSIs~~Gyi~lgi~~~~~~~~~gai~~~i~h~~~k~~LFl-~g~i~~-~~~~~~i~~l~Gl~ 356 (479)
T PRK06277 279 FGVVMALLQTDYKKLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFL-GAHIVY-RTKEGNLNKLGGLL 356 (479)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-HCCCCCHHHHHCCH
T ss_conf 9999999712468888887899999999999837688899999999999999999999-999999-55985299862818
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 54669999999886421011000000002443217888888986410244444210221134543331034245787443
Q gi|254780865|r 394 PHLPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSSHFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKMRV 473 (666)
Q Consensus 394 ~~~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~~~~~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~~ 473 (666)
T Consensus 357 ~~~P~~a~~~~i~~lsl~GiP------p~~GF~sK~~i~~~a~~~~~~-~l~~~~~~~sv~~~~y~lr~~~~~f~~~~~~ 429 (479)
T PRK06277 357 PVMPAVAFMVLCAKLAISGVP------PFNGFQSKLLLAQAAMNVNMP-ELAIIMIIVSIGTFVSMMKAFYLIYLKPCPE 429 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 677999999999999998666------642799999999999983879-9999999999999999999999996088885
Q ss_pred CCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 3210000001355333202456566632100000124
Q gi|254780865|r 474 DKDISHKIHESPLVMQIPLFILAIGSIFFGFIFHDVF 510 (666)
Q Consensus 474 ~~~~~~~~~e~~~~m~~pl~vLa~~si~~G~~~~~~~ 510 (666)
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~il~~l~i~~Gi~P~~~l 466 (479)
T PRK06277 430 EQLEEYKKAKVPKYAVFSLVVLTILCIILGICPDLVT 466 (479)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4333346678988799999999999999996339999