HHsearch alignment for GI: 254780865 and conserved domain: TIGR00940
>TIGR00940 2a6301s01 monovalent cation:proton antiporter; InterPro: IPR005663 This family of proteins consists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterised systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter.; GO: 0015077 monovalent inorganic cation transmembrane transporter activity, 0030004 cellular monovalent inorganic cation homeostasis.
Probab=100.00 E-value=0 Score=850.18 Aligned_cols=509 Identities=30% Similarity=0.528 Sum_probs=439.2
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEEEHHHH
Q ss_conf 99999999999973012421478999999999999999999999725898528999753101308822357787433789
Q gi|254780865|r 9 VFLPLIGAVFSGFFGRLMGKQFADIFTSLLMVIGAFLSWYVFYEIGFGHDVQVVKREIFPWIIFDGLDIPWGLRIDTLSS 88 (666)
Q Consensus 9 ~~~Pl~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~~~~D~ls~ 88 (666)
T Consensus 5 ~ilp~~~a~~IpIly~~~~rih~gWFvl~~plV~F~y~l~L~p~t~sGgv~h---~-ti~WvP--~lG~NFtly~DGl~l 78 (809)
T TIGR00940 5 VILPLLLALLIPILYKYDKRIHIGWFVLAIPLVLFLYTLSLLPITASGGVVH---K-TIDWVP--ELGLNFTLYLDGLAL 78 (809)
T ss_pred EEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---C-CCCCCC--CCCCCHHHHHHHHHH
T ss_conf 3078999999887442223202468899999999999997655651596021---0-158776--678742134425899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC
Q ss_conf 99999999999999997475306-88866189999999999999998655899998888885688998876203445410
Q gi|254780865|r 89 VMFVVVNSISAVVHIYSIGYMHD-DPHRPRFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKESAIK 167 (666)
Q Consensus 89 ~~~~~~~~i~~~~~~ys~~y~~~-~~~~~~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~~~~~ 167 (666)
T Consensus 79 LFslLItgIG~LVvLYsiyYlskk~e~l~nFy~ylL~FMGaMLGVVLSdNlI~LyvFWELTS~~SfLLIsyW~hr~~s~y 158 (809)
T TIGR00940 79 LFSLLITGIGVLVVLYSIYYLSKKEEKLPNFYVYLLLFMGAMLGVVLSDNLIVLYVFWELTSLASFLLISYWFHREKSRY 158 (809)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999988999999998777530126761699999999535654678778999999999999999999888874688889
Q ss_pred CCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 36300022122478999999999999620598999987543100012455556666666653202455317999999999
Q gi|254780865|r 168 ASMKAFVVNRIGDLGLILAISAIIYLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIICLLFF 247 (666)
Q Consensus 168 a~~k~~~~~~~g~~~~l~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 247 (666)
T Consensus 159 gAqksl~ITvfGGlamlgG~ill~~itgsfsi~~~i~~adai~------------------------nsplf~~am~Lvl 214 (809)
T TIGR00940 159 GAQKSLLITVFGGLAMLGGLILLAVITGSFSIDAVIESADAIR------------------------NSPLFLTAMVLVL 214 (809)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH------------------------CCCHHHHHHHHHH
T ss_conf 9875434643236899999998857516323999996113542------------------------0523899999999
Q ss_pred HHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99865433432343124000023322100013456666777999963013578134444567777788763001110245
Q gi|254780865|r 248 LGAMGKSAQLLLHVWLPDAMEGPTPVSALIHAATMVTAGVFLVARMSPLFELSPFVLDCITVLGCITAFFAATVGLVQHD 327 (666)
Q Consensus 248 ~g~~~K~a~~P~h~WLp~A~~aPtpvSAllhs~~mv~~Gvy~l~r~~~~~~~~~~~~~~~~~~g~~t~~~g~~~al~q~d 327 (666)
T Consensus 215 lGAfTKSAQFPFhiWLPdAMeAPTPVSAYLHSATMVKAGlyL~aR~tPvfagt~~WfW~v~l~GliTL~wgs~~A~~QqD 294 (809)
T TIGR00940 215 LGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLVARLTPVFAGTEAWFWIVALVGLITLLWGSLSAVKQQD 294 (809)
T ss_pred HHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98765420387554780211685840276766799998899888761120275579999999999999999998766766
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCC------------------CCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 2024432100013533445655311------------------1003465553100012222101232111000011012
Q gi|254780865|r 328 IKRVIAYSTCSQLGYMFVALGCRAY------------------GASIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRM 389 (666)
Q Consensus 328 ~Kr~lAySsis~~G~i~~~~g~~~~------------------~~a~~~~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~ 389 (666)
T Consensus 295 LKgiLAfSTiS~LGlI~~llglGs~~~Hy~~~DSmiK~YA~A~~AAvFHliNHATFKgsLFM~~GiiDHe-tGTRDirkL 373 (809)
T TIGR00940 295 LKGILAFSTISQLGLIMVLLGLGSASLHYDGDDSMIKIYALAAVAAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKL 373 (809)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC-CCCHHHHHH
T ss_conf 6778889888589999999962303215488723899999999999998886578768887551502458-886157652
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--------CC-CCCHHHHHHHHHHHH
Q ss_conf 776154669999999886421011000000002443217888888986410244--------44-421022113454333
Q gi|254780865|r 390 GGLYPHLPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSSHFTF--------VF-FLLLFAAFLTSFYSW 460 (666)
Q Consensus 390 gGl~~~~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~~~~~~--------~~-~~~~~~~~lt~~Y~~ 460 (666)
T Consensus 374 GGL~~iMPitfT~~~i~~aaMAGvP------pfNGFLSKEmFf~~~~~a~~~n~f~~~T~GyLFP~~a~vasvFtfvYs~ 447 (809)
T TIGR00940 374 GGLLAIMPITFTVALIASAAMAGVP------PFNGFLSKEMFFAEAITASLVNLFDVETLGYLFPVVAIVASVFTFVYSL 447 (809)
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCC------CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6501044689999999999844775------3342112788888888875157422025667877999999999999999
Q ss_pred HCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 1034245787443321000000135533320245656663210000012---4676421134554335753332012336
Q gi|254780865|r 461 RLMFLTFFGKMRVDKDISHKIHESPLVMQIPLFILAIGSIFFGFIFHDV---FFGSAYSSFWKGALFASSSNNVLERYHE 537 (666)
Q Consensus 461 r~~~~vF~G~~~~~~~~~~~~~e~~~~m~~pl~vLa~~si~~G~~~~~~---~~~~~~~~~~~~~l~~~~~~~~l~~~~~ 537 (666)
T Consensus 448 ~fi~~~FfG~~Kp-e~lp~k~HE~p~~Ml~sp~iL~~lv~vfGlfP~~l~~~iiepAv~sil~~~v~dGG~~~~-~~wH- 524 (809)
T TIGR00940 448 KFIFRVFFGRYKP-EDLPKKAHEAPILMLLSPAILALLVVVFGLFPALLTGSIIEPAVLSILREDVIDGGDVEL-YLWH- 524 (809)
T ss_pred HHHHHHHCCCCCC-CCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE-EEEC-
T ss_conf 9998651688560-126798887760753068889888887540024576337888888762378878751688-8860-
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 88999999999999999999
Q gi|254780865|r 538 VPLWVEYSSFIAFFVGFFSA 557 (666)
Q Consensus 538 ~~l~~~~i~ll~~iiGi~la 557 (666)
T Consensus 525 G~np~l~mt~v~~~~Gill~ 544 (809)
T TIGR00940 525 GLNPELLMTLVVLSLGILLY 544 (809)
T ss_pred CCCHHHHHHHHHHHHHHHHH
T ss_conf 78888999999999989999