HHsearch alignment for GI: 254780865 and conserved domain: TIGR00944
>TIGR00944 2a6301s04 Multicomponent K+:H+antiporter; InterPro: IPR004775 A group of uncharacterised proteins some of which are similar to various chains of the NADH-ubiquinone/plastoquinone (complex I).; GO: 0015386 potassium:hydrogen antiporter activity, 0006812 cation transport, 0016021 integral to membrane.
Probab=100.00 E-value=0 Score=473.13 Aligned_cols=457 Identities=21% Similarity=0.395 Sum_probs=381.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCEEEEEEEEEEEECCCCCEEEE
Q ss_conf 07989999999999999973012421478999999999999999999999725--8985289997531013088223577
Q gi|254780865|r 3 MIYEVIVFLPLIGAVFSGFFGRLMGKQFADIFTSLLMVIGAFLSWYVFYEIGF--GHDVQVVKREIFPWIIFDGLDIPWG 80 (666)
Q Consensus 3 ~l~~l~~~~Pl~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~wi~~~~~~~~~~ 80 (666)
T Consensus 1 n~liL~iliP~~~AilLifi~kr-d~~lkr~~~~a~tl~~~v~s~Il~~~v~~GtGsl~G~~~~~LG~W------kAPyg 73 (504)
T TIGR00944 1 NLLILAILIPVLVAILLIFINKR-DRILKRIIALASTLVVLVLSIILLRLVVAGTGSLKGSGVLELGNW------KAPYG 73 (504)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC------CCHHH
T ss_conf 91038889999999886216775-068888998889999999999999998413676577525524871------06179
Q ss_pred --EEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf --874337899999999999999999747530688866189999999999999998655899998888885688998876
Q gi|254780865|r 81 --LRIDTLSSVMFVVVNSISAVVHIYSIGYMHDDPHRPRFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGF 158 (666)
Q Consensus 81 --~~~D~ls~~~~~~~~~i~~~~~~ys~~y~~~~~~~~~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~ 158 (666)
T Consensus 74 IVlvlD~fsaLl~~~t~ii~l~v~lYS~~~~g~~rER~~yys~vqfllaG~~GAFlTGDlFNlfVFFE~~L~aSY~Llv~ 153 (504)
T TIGR00944 74 IVLVLDRFSALLVLTTSIIALLVQLYSYARVGTKRERYYYYSLVQFLLAGVNGAFLTGDLFNLFVFFELLLIASYGLLVL 153 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999986256522255505789999999998755778547999999999999999999997
Q ss_pred HCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf 20344541036300022122478999999999999620598999987543100012455556666666653202455317
Q gi|254780865|r 159 WSFKESAIKASMKAFVVNRIGDLGLILAISAIIYLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDS 238 (666)
Q Consensus 159 ~~~~~~~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (666)
T Consensus 154 -Gstki~l~e~lkYi~vN~vsSalFviGV~~lY~v~GTLNmADls~Kla~L----------------------e~~~~gL 210 (504)
T TIGR00944 154 -GSTKIQLKEGLKYIVVNVVSSALFVIGVSLLYAVAGTLNMADLSTKLAAL----------------------EARSRGL 210 (504)
T ss_pred -CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----------------------CCCCCCH
T ss_conf -69720221020344577899999999999999998775699999998526----------------------8887623
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHC-CCCCCCCCHHHHHHHHHHHHHHHHHHCC-CCC-----CHHHHHHHHHHH
Q ss_conf 999999999998654334323431240000-2332210001345666677799996301-357-----813444456777
Q gi|254780865|r 239 IAIICLLFFLGAMGKSAQLLLHVWLPDAME-GPTPVSALIHAATMVTAGVFLVARMSPL-FEL-----SPFVLDCITVLG 311 (666)
Q Consensus 239 ~~~~~~l~~~g~~~K~a~~P~h~WLp~A~~-aPtpvSAllhs~~mv~~Gvy~l~r~~~~-~~~-----~~~~~~~~~~~g 311 (666)
T Consensus 211 v~~~~~ll~~vF~~KaG~fPl~fWLP~aYyApp~pi~a~F-GAlLTKVG~YaI~R~~~L~F~~~~Gass~F~~~~~~~la 289 (504)
T TIGR00944 211 VEVVSVLLLLVFLVKAGVFPLYFWLPTAYYAPPAPIAALF-GALLTKVGIYAIIRLFLLVFGDDAGASSAFGHELLVFLA 289 (504)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 5789999999998733756300003200111424699987-689988999999999999863210454313799999999
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCC---CCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCC-----
Q ss_conf 778876300111024520244321000135334456553---111003465553100012222101232111000-----
Q gi|254780865|r 312 CITAFFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCR---AYGASIFHLFTHAFFKALLFLGSGSVIHAVAGE----- 383 (666)
Q Consensus 312 ~~t~~~g~~~al~q~d~Kr~lAySsis~~G~i~~~~g~~---~~~~a~~~~~~H~~~ka~LFl~aG~vi~~~~~~----- 383 (666)
T Consensus 290 ~LTiiFG~iG~lAy~n~~ki~~Ynv~~avGviL~gVa~~t~~~~~GAiyYl~~d~L~~gAlFlLig~~i~-~~gtGadvl 368 (504)
T TIGR00944 290 LLTIIFGGIGVLAYANVKKIVLYNVLVAVGVILVGVALGTDASLAGAIYYLVHDMLVKGALFLLIGLLIR-LTGTGADVL 368 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHH
T ss_conf 9999986799999998769999999999889997664057147899999999999999999999999997-306763788
Q ss_pred -CCCCCCCCCCCC-------------CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------
Q ss_conf -011012776154-------------6699999998864210110000000024432178888889864102--------
Q gi|254780865|r 384 -QDMRRMGGLYPH-------------LPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSSHF-------- 441 (666)
Q Consensus 384 -~~i~~~gGl~~~-------------~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~~~~-------- 441 (666)
T Consensus 369 aa~l~~~GglikreeeeevGaaiPGtypVLGw~Ffi~AlsLAGiP------PLSGF~gKF~i~~g~F~~Paaelatamsa 442 (504)
T TIGR00944 369 AATLEKYGGLIKREEEEEVGAAIPGTYPVLGWSFFIAALSLAGIP------PLSGFIGKFAIVEGLFDRPAAELATAMSA 442 (504)
T ss_pred HHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC------CCHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 887998389643211101245577510378899999999855777------40257788887504445417899988642
Q ss_pred -CCCC-CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf -4444-4210221134543331034245787443321000000135533320245656663210
Q gi|254780865|r 442 -TFVF-FLLLFAAFLTSFYSWRLMFLTFFGKMRVDKDISHKIHESPLVMQIPLFILAIGSIFFG 503 (666)
Q Consensus 442 -~~~~-~~~~~~~~lt~~Y~~r~~~~vF~G~~~~~~~~~~~~~e~~~~m~~pl~vLa~~si~~G 503 (666)
T Consensus 443 g~~t~~~l~lLSsL~vlysv~RIfi~~Fwg~~kG~~p~~~~~-~-----~k~l~~~a~~~~~ls 500 (504)
T TIGR00944 443 GDYTIVVLVLLSSLVVLYSVLRIFIRTFWGEEKGEIPRVNKI-E-----VKPLVVLAAVAILLS 500 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE-E-----EEHHHHHHHHHHHHH
T ss_conf 689999999999999999999998764126757888985336-6-----402799999999999