HHsearch alignment for GI: 254780866 and conserved domain: COG4078

>COG4078 Predicted membrane protein [Function unknown].
Probab=98.13  E-value=3.7e-06  Score=50.99  Aligned_cols=159  Identities=16%  Similarity=0.144  Sum_probs=115.6

Q ss_pred             CCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC---C---------------CHHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf             54054665225889999999999999997520112---1---------------00235678999863024302654043
Q gi|254780866|r   73 YFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSI---Q---------------ENFREYMIAFLVLESMVIGAFLSLDM  134 (499)
Q Consensus        73 ~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~---~---------------~~~~~f~~llll~~~~~~~~~~s~dl  134 (499)
T Consensus        14 PfGDIV~yls~fn~i~fa~~lift~l~~ls~te~qvE~~~~~~~~k~~~V~~~E~kIrr~l--AiVcglAtaGam~TgDl   91 (221)
T COG4078          14 PFGDIVPYLSTFNMIIFAVLLIFTALPILSNTEVQVEIDHRRPRIKAKIVSPREDKIRRAL--AIVCGLATAGAMTTGDL   91 (221)
T ss_pred             ECCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCHHHHHHHHH--HHHHHHHHCCCEEECCH
T ss_conf             1555453225488999999999999987468624787403675542278560699999999--99976640464443305


Q ss_pred             CCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
Q ss_conf             31112343103431235531234332321000113554455677666554432100010034432101330378999985
Q gi|254780866|r  135 LLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIA  214 (499)
Q Consensus       135 ~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~l  214 (499)
T Consensus        92 FnftLFlsL~GI~NiGivsaV~~e~vL~aafqYGLiamiAsLPLFGgAaliLastGTLSv~EL~km~~~~--~l~f~k~l  169 (221)
T COG4078          92 FNFTLFLSLLGISNIGIVSAVEDEFVLEAAFQYGLIAMIASLPLFGGAALILASTGTLSVHELMKMPKGA--TLTFGKAL  169 (221)
T ss_pred             HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEHHHHHCCCCCC--EEHHHHHH
T ss_conf             7799999997622011000256899999898774899996065567513677437723688862699997--74498999


Q ss_pred             HHCCCCCCCCCCCCCCCCCCC
Q ss_conf             410344455400023201010
Q gi|254780866|r  215 FFCSFAIKIPMFPFHTWLPNA  235 (499)
Q Consensus       215 l~~g~~~K~~~~PfH~WlP~~  235 (499)
T Consensus       170 l~aGv~GEtGvaPFYA~Kaem  190 (221)
T COG4078         170 LTAGVIGETGVAPFYAVKAEM  190 (221)
T ss_pred             HHCCCCCCCCCCHHHHHHHHH
T ss_conf             871212446656057777998