HHsearch alignment for GI: 254780866 and conserved domain: MTH00014
>MTH00014 ND4 NADH dehydrogenase subunit 4; Validated.
Probab=100.00 E-value=0 Score=595.33 Aligned_cols=446 Identities=30% Similarity=0.542 Sum_probs=385.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEEHHHHH
Q ss_conf 99999999999998720355303579999999999999999999986308888189998631348540546652258899
Q gi|254780866|r 8 IVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLGVDGISIL 87 (499)
Q Consensus 8 lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iD~ls~~ 87 (499)
T Consensus 2 l~il~p~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~----------~~~~~~~~vD~lS~~ 61 (451)
T MTH00014 2 LKLIMPLISLLLLPLFK------KLYAWISILTLILSLLILIF--LY--MPSASI----------SMLTESLSSDMLSFP 61 (451)
T ss_pred HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHH--HH--CCCCCH----------HHHHHHHHHHHHHHH
T ss_conf 13899999999999998------69999999999999999999--85--654327----------787588834674799
Q ss_pred HHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECC-CCCCCCCC
Q ss_conf 999999999999975201121--002356789998630243026540433111234310343123553123-43323210
Q gi|254780866|r 88 LVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWG-GSERIYAA 164 (499)
Q Consensus 88 f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~-~~~~~~aa 164 (499)
T Consensus 62 l~~Ls~~i~~l~~l~S~~~~~~~~~~~~f~~l~l~l~~~m~~~f~s~nl~~fyif~E~~lip~~~LI~~~g~~~~r~~A~ 141 (451)
T MTH00014 62 LIILTLWITALMILASFKIFQNNKAPKTFMTNILILNLILILCFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQAG 141 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 99999999999999969998568637899999999999999999982799999999999999999999608979999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00113554455677666554432100010034432101330378999985410344455400023201010002222344
Q gi|254780866|r 165 YKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGS 244 (499)
Q Consensus 165 ~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~s 244 (499)
T Consensus 142 ~~~~iyt~~gsl~lL~~i~~ly~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~aF~vK~p~~P~H~WLP~Ah~eAP~~~S 221 (451)
T MTH00014 142 FYLMIYTVTASLPLLMSILLIFYTNNSLNMFMSNTYTPPSIYSMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGS 221 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHH
T ss_conf 99999999999999999999998649699999998663445899999999999999970687201013431075977999
Q ss_pred CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 33332322333211100001112233100000000012222212211100002443223321001354023331048754
Q gi|254780866|r 245 VFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKS 324 (499)
Q Consensus 245 alls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~ 324 (499)
T Consensus 222 ~lLagvllK~G~YgliR~~-~~~~~~~~~~~~~l~~i~~~~~~~~~l~al~Q~DlKrllAYSSIshmG~i~~gi~~~~~~ 300 (451)
T MTH00014 222 MILAGILLKLGGYGLLRMS-SLFMSINKSLSAPLSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGAMSNTSW 300 (451)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999-853133699999999999999999999999983668354211798999999999974589
Q ss_pred CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHH
Q ss_conf 22102345554210233303567777642001111002355654202332013455553010244431122899999998
Q gi|254780866|r 325 GVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQ 404 (499)
Q Consensus 325 ~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~ 404 (499)
T Consensus 301 g~~gal~~mi~Hgl~~s~LF~~~g~i~~~~~tr~i~~~~Gl~~~~P~~~~~~~i~~la~~g~Pp~~gF~sE~~i~~~~~~ 380 (451)
T MTH00014 301 GWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPAMTMWWFLLSAANMAAPPSINLLSEIMLLTSILS 380 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999987577149985893400279999999999997626533619999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 65999999999999999999999999972889876555687889126899999999999997724889999
Q gi|254780866|r 405 NSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRDT 475 (499)
Q Consensus 405 ~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~~ 475 (499)
T Consensus 381 ~~~~~~~~~~~~~~lsa~Y~l~l~~~~~~G~~~~-~~~~~~~~~~re~~~~~~h~~pl~~l~~~p~~~~~w 450 (451)
T MTH00014 381 SSTSTAILLALTSFLAAAYSLFLYTSTQHGSPPS-FSNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 450 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 8699999999999999999999999987799801-040089984579999999999999999819999714