HHsearch alignment for GI: 254780866 and conserved domain: MTH00032
>MTH00032 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00 E-value=0 Score=589.39 Aligned_cols=457 Identities=20% Similarity=0.332 Sum_probs=381.0
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC---CCEEEEEEEEH
Q ss_conf 999999999999998720355303579999999999999999999986308888189998631348---54054665225
Q gi|254780866|r 7 SIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWID---YFCSYHLGVDG 83 (499)
Q Consensus 7 ~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~iD~ 83 (499)
T Consensus 3 llii~lPl~~~~i~~~~gr~~~~-~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~-~~~~~~w~~~~~~~~~~~~~~D~ 80 (677)
T MTH00032 3 LLVLLLPFINAFLLGFFGRLIGT-IGSGILSTICMGSSTLIALFLAYEVLINDAVV-HIELYKWIESEIFITHIGLLYDT 80 (677)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE-EEEEEECCCCCCCCEEEEEEEHH
T ss_conf 99999999999999985052560-35799999999999999999999995589738-99985433456765257877521
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCH--HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-CC
Q ss_conf 889999999999999997520112100--235678999863024302654043311123431034312355312343-32
Q gi|254780866|r 84 ISILLVVLTTFLTPFCILSSWKSIQEN--FREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS-ER 160 (499)
Q Consensus 84 ls~~f~~l~~~i~~l~~~ys~~~~~~~--~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~-~~ 160 (499)
T Consensus 81 ls~~m~~~v~~is~lv~iYS~~Ym~~d~~~~rf~~~l~lF~~~Ml~lV~s~nl~~lfigWE~vgl~SylLI~~~~~r~~a 160 (677)
T MTH00032 81 LSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQA 160 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 17999999999999999996887379998517999999999999999995619999999999999989760626884789
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC----------------CCHHHHHHHHHHHHCCCCCCCC
Q ss_conf 321000113554455677666554432100010034432101----------------3303789999854103444554
Q gi|254780866|r 161 IYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSK----------------FPFSIQYWMWIAFFCSFAIKIP 224 (499)
Q Consensus 161 ~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~----------------~~~~~~~~~~~ll~~g~~~K~~ 224 (499)
T Consensus 161 ~~aa~ka~i~nrvGd~~~l~gi~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ga~~KSA 240 (677)
T MTH00032 161 NKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGGSVGSGIMDRGYGEGGAYESPLAPFAIIGILLLIGCIGKSA 240 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999985076999999999999996774299876554225665433554332014226899999999999988741
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCC
Q ss_conf 000232010100022223443333-2322333211100001112233100000000012222212211100002443223
Q gi|254780866|r 225 MFPFHTWLPNAHVQAPTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLI 303 (499)
Q Consensus 225 ~~PfH~WlP~~y~~ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~Krll 303 (499)
T Consensus 241 q~plh~WLPdA-MegPTPVSALiHaatmV~AGvyll~R~~-pl~~~-~~~~~~~i~~~G~~T~~~~a~~al~Q~DiKril 317 (677)
T MTH00032 241 QLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLMIRSF-PLFEK-APLTLLIITIFGALTAFFAATVGLVQNDLKKVI 317 (677)
T ss_pred HCCCCHHCHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHHC-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 06162206787-5589960478879999998999999974-03443-199999999999999999999998773155888
Q ss_pred CCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC--CCCCCHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 3210013540233310487542210234555421023330356777764200--11110023556542023320134555
Q gi|254780866|r 304 AYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLH--TRDIFAYGGLVHNMPRYAVVMMVFTM 381 (499)
Q Consensus 304 AySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g--~~~l~~l~Gl~~~~P~~~~~~~i~~l 381 (499)
T Consensus 318 AyST~SQlGym~~~~Gl~g--~~~~a~fHl~~Ha~fKalLFl~aG~vih~~~~~~qd~r~mGgl~~~mP~t~~~~~i~~l 395 (677)
T MTH00032 318 AYSTCSQLGYMVLIIGIEG--SHNVGLFHLVNHAFFKALLFLSAGSVIHSTTVDEQDMRKMGGLIHSIPFTYTMMLIGSF 395 (677)
T ss_pred HHHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 8736888999999972220--79999999998999999999702288870474356899858973456499999999999
Q ss_pred HHCCCHHHHHHCCHHHHHHHHHHH--------------------------------------HHHHHHHHHHHHHHHHHH
Q ss_conf 530102444311228999999986--------------------------------------599999999999999999
Q gi|254780866|r 382 ANMGLPGTSGFIGEFLVIMSVFQN--------------------------------------SNTVAVLASFGVVLSALY 423 (499)
Q Consensus 382 sl~G~Pp~~GF~~k~~i~~~~~~~--------------------------------------~~~~~~~~~~~~~ls~~~ 423 (499)
T Consensus 396 al~G~P~~~GF~SKd~ile~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~aa~LTa~Y 475 (677)
T MTH00032 396 SIMGLPYLTGFYSKDLILELTYSGRNMGIPFGSSLLSIEGDIEIKKGGIRPWGGAGLSPSRGSAFAFWLGTVAALLTAFY 475 (677)
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 98068620114207999999986013454311100111100000122211000000133402499999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCC----CCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999997288987655----56878891268999999999999977248
Q gi|254780866|r 424 SLWLYRKVVFGVSKCEKV----QQLKDLSLRERCMVYPIAVLTVFFGIYPV 470 (499)
Q Consensus 424 ~l~~~~~~~~g~~~~~~~----~~~~~~~~~~~~~~~~l~~~~i~lGi~p~ 470 (499)
T Consensus 476 S~RLifltF~g~pn~~~~~~~~~~~~~~~~~ml~pL~iLa~gsIf~G~l~~ 526 (677)
T MTH00032 476 SIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYLIQ 526 (677)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999998168999976657676676778899999999999999999998