HHsearch alignment for GI: 254780866 and conserved domain: MTH00041
>MTH00041 ND2 NADH dehydrogenase subunit 2; Validated.
Probab=100.00 E-value=0 Score=408.43 Aligned_cols=302 Identities=18% Similarity=0.301 Sum_probs=261.4
Q ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 23567899986302430265404331112343103431235531234332321000113554455677666554432100
Q gi|254780866|r 111 FREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKK 190 (499)
Q Consensus 111 ~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~g 190 (499)
T Consensus 1 r~~~~~ll~~~~~G~~~~~sS~~~~~~wvglEi~sls~~~Li~~~~~~~s~EAa~KYFl~qa~aS~llL~g~~l~~~~~g 80 (350)
T MTH00041 1 RNVLLFLITNVILGTIIVVSSHHWFLIWVGLELNTLSIIPILCSNFTPRNVEATIKYFLVQAFSAAILLNGALIQAWLSG 80 (350)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 92999999999999999999999999999999999999999981899428999999999999999999999999999986
Q ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CHHCCCCCCC
Q ss_conf 010034432101330378999985410344455400023201010002222344333323223332111-0000111223
Q gi|254780866|r 191 TSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGC-IRFLLPLFPL 269 (499)
Q Consensus 191 s~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l-~r~~~~l~~~ 269 (499)
T Consensus 81 s~~i~~~~---------~~~~~~li~~al~~Klgl~PfH~W~Pdv~~g~~~~~~~~ls-t~~Kiap~~ll~~~~~----- 145 (350)
T MTH00041 81 SWSINGPL---------NSLSSIIITIALGLKLGLFPCHFWFPDVIQGLNFLQGLILS-TWQKIAPLIILIYIIN----- 145 (350)
T ss_pred HHHHHHHH---------HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHHHHC-----
T ss_conf 23765477---------79999999999998538415988887685667289999999-9999999999999960-----
Q ss_pred CCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 31000000000122222122111000024432233210013540233310487542210234555421023330356777
Q gi|254780866|r 270 ASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGV 349 (499)
Q Consensus 270 ~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~ 349 (499)
T Consensus 146 --~~~~~il~~l~~lS~liG~~~al~Q~~lkrlLAYSSIsh~G~ml~~~~~~~----~~~~~~~~~Y~~~~~~lf~~~-- 217 (350)
T MTH00041 146 --NLNSNILITLGILSVLIGGWGGLNQTQTRKILAFSSIAHMGWIIITSAYSL----NAGIIMFLIYIIINTSIFLIF-- 217 (350)
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH--
T ss_conf --001889999999879999999998877879999989989999999999869----999999999999999999999--
Q ss_pred HHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q ss_conf 76420011110023556542023320134555530102444311228999999986599-99999999999999999999
Q gi|254780866|r 350 IYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSNT-VAVLASFGVVLSALYSLWLY 428 (499)
Q Consensus 350 i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~~-~~~~~~~~~~ls~~~~l~~~ 428 (499)
T Consensus 218 --~~~~~~~i~~l~gl~~~~p~~~~~~~i~lLSLaGlPPl~GF~~K~lil~~li~~~~~~la~i~il~Slisl~yYLRl~ 295 (350)
T MTH00041 218 --NEFNISTLSHLNRLSYLNPISAATLILVILSLGGLPPLTGFLNKFISLNCLIQNNSILLSIILIIGSLLSLFFYLRIS 295 (350)
T ss_pred --HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf --883106099998499986999999999999987051576699999999999980839999999999999999999999
Q ss_pred HHHHCCCCC
Q ss_conf 999728898
Q gi|254780866|r 429 RKVVFGVSK 437 (499)
Q Consensus 429 ~~~~~g~~~ 437 (499)
T Consensus 296 y~~~l~~~p 304 (350)
T MTH00041 296 FNSSLILFP 304 (350)
T ss_pred HHHHHHCCC
T ss_conf 999986899