HHsearch alignment for GI: 254780866 and conserved domain: MTH00070
>MTH00070 ND2 NADH dehydrogenase subunit 2; Provisional.
Probab=100.00 E-value=0 Score=401.20 Aligned_cols=337 Identities=19% Similarity=0.287 Sum_probs=272.5
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 35678999863024302654043311123431034312355312343323210001135544556776665544321000
Q gi|254780866|r 112 REYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKT 191 (499)
Q Consensus 112 ~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs 191 (499)
T Consensus 4 ~~l~l~l~~l~lg~~l~~sS~~w~~~wvglEi~~l~~~~Li~~~~~~~s~Eaa~KYfliq~~~S~~~L~g~~~~~~~~g~ 83 (346)
T MTH00070 4 YALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQAAASALILFSSTINAWFTGE 83 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999999999999999999999999999758999489999999999999999999999999999971
Q ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
Q ss_conf 10034432101330378999985410344455400023201010002222344333323223332111000011122331
Q gi|254780866|r 192 SSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLAS 271 (499)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~ 271 (499)
T Consensus 84 ~~~~~~~~~---------~~~~li~i~l~~Klg~~PfH~W~Pdv~~g~~~~~~~~lst-~~Kiap~~~l~~~~~------ 147 (346)
T MTH00070 84 WTIMNMQTP---------LPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILST-WQKLAPMALLIQISQ------ 147 (346)
T ss_pred HHHHHHHHH---------HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH-HHHHHHHHHHHHHHH------
T ss_conf 777788779---------9999999999998464824510999986544999999999-999989999999998------
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 00000000012222212211100002443223321001354023331048754221023455542102333035677776
Q gi|254780866|r 272 QYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIY 351 (499)
Q Consensus 272 ~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~ 351 (499)
T Consensus 148 ~~~~~~l~~~~~lS~iiG~i~al~Q~~iKrlLAYSSI~h~G~ml~~l~~~~~----~~~~y~~~Y~~~~~~lf~~~~~-- 221 (346)
T MTH00070 148 SLNSNLLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMILILTFSPH----LTLLNLLIYLIMTSSMFLMLMN-- 221 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH--
T ss_conf 8769999999999999999876511542078876589788999999998589----9999999999999999999999--
Q ss_pred HHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 42001111002355654202332013455553010244431122899999998659-99999999999999999999999
Q gi|254780866|r 352 DRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSN-TVAVLASFGVVLSALYSLWLYRK 430 (499)
Q Consensus 352 ~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~~~l~~~~~ 430 (499)
T Consensus 222 --~~~~~i~~l~~l~~~~p~~~~~~~i~llSLaGlPP~~GF~~K~~ii~~~i~~~~~~l~~ilil~S~isl~yYLRi~~~ 299 (346)
T MTH00070 222 --LNSTNINKLSTSWSKNPTLTSMMMLTLLSLGGLPPTTGFMPKWLILQELTKQNLTILATIMALSALLSLFFYLRLSYA 299 (346)
T ss_pred --HCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf --737869988462642299999999999998632176789999999999998484999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 972889876555687--889126899999999999997724889
Q gi|254780866|r 431 VVFGVSKCEKVQQLK--DLSLRERCMVYPIAVLTVFFGIYPVPI 472 (499)
Q Consensus 431 ~~~g~~~~~~~~~~~--~~~~~~~~~~~~l~~~~i~lGi~p~~~ 472 (499)
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 343 (346)
T MTH00070 300 MSLTTSPNTSNSKLMWRFKNKTPNLLSLTIILSTMLLPITPTIL 343 (346)
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99857999998767247699964489999999999998869999