HHsearch alignment for GI: 254780866 and conserved domain: MTH00135
>MTH00135 ND2 NADH dehydrogenase subunit 2; Provisional.
Probab=100.00 E-value=0 Score=391.42 Aligned_cols=333 Identities=19% Similarity=0.279 Sum_probs=265.0
Q ss_pred HHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf 78999863024302654043311123431034312355312343323210001135544556776665544321000100
Q gi|254780866|r 115 MIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSI 194 (499)
Q Consensus 115 ~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~ 194 (499)
T Consensus 7 ~~ll~~l~lgt~i~~sS~~w~~~w~gLEln~ls~ipLi~~~~~~~s~Eaa~KYFliqa~aS~~lL~~~~~~~~~tg~~~i 86 (347)
T MTH00135 7 TILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDI 86 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999889999999999999999998779998389999999999999999999999999999982688
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC
Q ss_conf 34432101330378999985410344455400023201010002222344333323223332111000011122331000
Q gi|254780866|r 195 IDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYF 274 (499)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~ 274 (499)
T Consensus 87 ~~~~~~---------~~~~li~~~l~~Klg~aPfH~W~Pdv~~g~~~~~~~~l~-t~qKiap~~ll~~~~~-------~~ 149 (347)
T MTH00135 87 QQLSHP---------LATTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILS-TWQKLAPFALILQIAP-------TN 149 (347)
T ss_pred HHHHHH---------HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH-HHHHHHHHHHHHHHHH-------CC
T ss_conf 877659---------999999999999980340886499998389789999999-9999999999999851-------00
Q ss_pred CCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 00000012222212211100002443223321001354023331048754221023455542102333035677776420
Q gi|254780866|r 275 APVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRL 354 (499)
Q Consensus 275 ~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~ 354 (499)
T Consensus 150 ~~~l~~l~~lS~~vG~~~al~Q~~lkrlLAYSSIsh~Gwml~~l~~~~~----~~~~~~~~Y~~~~~~~f~~----~~~~ 221 (347)
T MTH00135 150 PTLLITLGLLSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPS----LTLLALLTYIIMTSSAFLT----FKLN 221 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH----HHHH
T ss_conf 9999999999999999987643416799999988889999999997378----9999999999999999999----9983
Q ss_pred CCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 01111002355654202332013455553010244431122899999998659-99999999999999999999999972
Q gi|254780866|r 355 HTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSN-TVAVLASFGVVLSALYSLWLYRKVVF 433 (499)
Q Consensus 355 g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~~~l~~~~~~~~ 433 (499)
T Consensus 222 ~~~~i~~l~~~~~~~p~~~~~~~i~llSLaGlPP~~GF~~K~~il~~li~~~~~~la~i~il~SlislfyYlRi~y~~~~ 301 (347)
T MTH00135 222 SSTKINTLATSWTKAPALTALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLCYAMTL 301 (347)
T ss_pred CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 73589887561420199999999999998532166689999999999998284999999999999999999999999997
Q ss_pred CCCCCCCC--CCCCCCCCCHHHHHHHHH-HHHHHHHHHHHHH
Q ss_conf 88987655--568788912689999999-9999997724889
Q gi|254780866|r 434 GVSKCEKV--QQLKDLSLRERCMVYPIA-VLTVFFGIYPVPI 472 (499)
Q Consensus 434 g~~~~~~~--~~~~~~~~~~~~~~~~l~-~~~i~lGi~p~~~ 472 (499)
T Consensus 302 ~~~p~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~lp~~p~~~ 343 (347)
T MTH00135 302 TISPNTLNGTTPWRLQSTQLTLPLAISTTATLMLLPLTPAIL 343 (347)
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 189999887888688999862789999999999987889999