HHsearch alignment for GI: 254780866 and conserved domain: MTH00135

>MTH00135 ND2 NADH dehydrogenase subunit 2; Provisional.
Probab=100.00  E-value=0  Score=391.42  Aligned_cols=333  Identities=19%  Similarity=0.279  Sum_probs=265.0

Q ss_pred             HHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf             78999863024302654043311123431034312355312343323210001135544556776665544321000100
Q gi|254780866|r  115 MIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSI  194 (499)
Q Consensus       115 ~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~  194 (499)
T Consensus         7 ~~ll~~l~lgt~i~~sS~~w~~~w~gLEln~ls~ipLi~~~~~~~s~Eaa~KYFliqa~aS~~lL~~~~~~~~~tg~~~i   86 (347)
T MTH00135          7 TILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDI   86 (347)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999889999999999999999998779998389999999999999999999999999999982688


Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC
Q ss_conf             34432101330378999985410344455400023201010002222344333323223332111000011122331000
Q gi|254780866|r  195 IDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYF  274 (499)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~  274 (499)
T Consensus        87 ~~~~~~---------~~~~li~~~l~~Klg~aPfH~W~Pdv~~g~~~~~~~~l~-t~qKiap~~ll~~~~~-------~~  149 (347)
T MTH00135         87 QQLSHP---------LATTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILS-TWQKLAPFALILQIAP-------TN  149 (347)
T ss_pred             HHHHHH---------HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH-HHHHHHHHHHHHHHHH-------CC
T ss_conf             877659---------999999999999980340886499998389789999999-9999999999999851-------00


Q ss_pred             CCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf             00000012222212211100002443223321001354023331048754221023455542102333035677776420
Q gi|254780866|r  275 APVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRL  354 (499)
Q Consensus       275 ~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~  354 (499)
T Consensus       150 ~~~l~~l~~lS~~vG~~~al~Q~~lkrlLAYSSIsh~Gwml~~l~~~~~----~~~~~~~~Y~~~~~~~f~~----~~~~  221 (347)
T MTH00135        150 PTLLITLGLLSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPS----LTLLALLTYIIMTSSAFLT----FKLN  221 (347)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH----HHHH
T ss_conf             9999999999999999987643416799999988889999999997378----9999999999999999999----9983


Q ss_pred             CCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             01111002355654202332013455553010244431122899999998659-99999999999999999999999972
Q gi|254780866|r  355 HTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSN-TVAVLASFGVVLSALYSLWLYRKVVF  433 (499)
Q Consensus       355 g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~~~l~~~~~~~~  433 (499)
T Consensus       222 ~~~~i~~l~~~~~~~p~~~~~~~i~llSLaGlPP~~GF~~K~~il~~li~~~~~~la~i~il~SlislfyYlRi~y~~~~  301 (347)
T MTH00135        222 SSTKINTLATSWTKAPALTALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLCYAMTL  301 (347)
T ss_pred             CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             73589887561420199999999999998532166689999999999998284999999999999999999999999997


Q ss_pred             CCCCCCCC--CCCCCCCCCHHHHHHHHH-HHHHHHHHHHHHH
Q ss_conf             88987655--568788912689999999-9999997724889
Q gi|254780866|r  434 GVSKCEKV--QQLKDLSLRERCMVYPIA-VLTVFFGIYPVPI  472 (499)
Q Consensus       434 g~~~~~~~--~~~~~~~~~~~~~~~~l~-~~~i~lGi~p~~~  472 (499)
T Consensus       302 ~~~p~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~lp~~p~~~  343 (347)
T MTH00135        302 TISPNTLNGTTPWRLQSTQLTLPLAISTTATLMLLPLTPAIL  343 (347)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             189999887888688999862789999999999987889999