HHsearch alignment for GI: 254780866 and conserved domain: MTH00151
>MTH00151 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00 E-value=0 Score=499.51 Aligned_cols=406 Identities=22% Similarity=0.318 Sum_probs=345.5
Q ss_pred CCCCCEEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 088881899986313485405466522588999999999999999752011210--023567899986302430265404
Q gi|254780866|r 56 DKGRSSFQMIEYYHWIDYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQE--NFREYMIAFLVLESMVIGAFLSLD 133 (499)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~--~~~~f~~llll~~~~~~~~~~s~d 133 (499)
T Consensus 29 ~~~~~~~~ew~~~~~~~~~~~~~~~~D~~S~~F~~~V~~Is~~V~~yS~~YM~~d~~~~rF~~~~~lFv~sM~~lv~s~N 108 (566)
T MTH00151 29 LNNISYIFEWELLSVSSCSFSFDLVLDWVSLSFSGVVCLISGCVFLFSDSYMKEDPFLKRFMWLVMLFVLSMNLLIFIPS 108 (566)
T ss_pred HCCEEEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 38948999766235288473875206831899999999999999999889706899802799999999999999999837
Q ss_pred CCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH
Q ss_conf 33111234310343123553123433232100011355445567766655443210001003443210133037899998
Q gi|254780866|r 134 MLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWI 213 (499)
Q Consensus 134 l~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ 213 (499)
T Consensus 109 li~l~lgWEglGl~SylLI~~y~~~~s~~ag~~t~l~nRvGD~~ll~~i~~~-~~~g~~~~~~~~~-----~~~~~~~~~ 182 (566)
T MTH00151 109 LFSLLLGWDGLGIVSFLLVIYYQNKKSLSAGMLTVLTNRIGDVFILISISLF-VLLGHWSILCMWD-----FELFGLLGL 182 (566)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-----HHHHHHHHH
T ss_conf 9999999999999999998770982899999999999988899999999999-9996699998865-----578999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
Q ss_conf 5410344455400023201010002222344333-323223332111000011122331000000000122222122111
Q gi|254780866|r 214 AFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLV 292 (499)
Q Consensus 214 ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~ 292 (499)
T Consensus 183 ~l~~a~~tKSAQ~Pf~~WLP~AM-aaPTPVSALvHSsTmVtAGvylliR~~-~~~~-~~~~~~~~ll~ig~~T~l~a~~~ 259 (566)
T MTH00151 183 FLVLAGMTKSAQIPFSSWLPAAM-AAPTPVSALVHSSTLVTAGVFLIIRFF-YYLS-SSPGFSSFLLFISLLTLLMAGVS 259 (566)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHH-CCCCCHHHHHHCCHHHHHHHHHHHHHH-HHHH-HCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998750077723026762-699946777601134353488999862-7875-06999999999999999999999
Q ss_pred CCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH-HHCCCCCCHHHHHHHHHHC
Q ss_conf 000024432233210013540233310487542210234555421023330356777764-2001111002355654202
Q gi|254780866|r 293 SMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYD-RLHTRDIFAYGGLVHNMPR 371 (499)
Q Consensus 293 al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~-~~g~~~l~~l~Gl~~~~P~ 371 (499)
T Consensus 260 A~~q~DiKkiiA~STlSQLG~M~~~lglg~---~~la~fHL~~HA~FKalLFl~aG~vIh~~~~~QDir~mggl~~~~P~ 336 (566)
T MTH00151 260 AVYEYDLKKIIALSTLSQLGVMMFSLGLGM---PMLALFHLYTHALFKALLFLCAGNIIHCYSGKQDIRQLGSLFSLLPV 336 (566)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHH
T ss_conf 996541766877727988899999986520---88999999875899999999768999715633159985798654399
Q ss_pred CCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 33201345555301024443112289999999865--9999999999999999999999999728898765556878891
Q gi|254780866|r 372 YAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNS--NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSL 449 (499)
Q Consensus 372 ~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~ 449 (499)
T Consensus 337 t~~~~~i~~lsL~G~PflsGFySKD~Ile~~~~~~~n~~~~~~~~~s~~lT~~Ys~Rl~~~~~~~~~~~~~~~~~~e~~~ 416 (566)
T MTH00151 337 TSWFLNVSNMSLCGAPFLSGFYSKDLILESMLFSNMNLLMVLLGLVGVCLTALYSARLSFFVLWGSPTSNSYSNSSDEDL 416 (566)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
T ss_conf 99999999999873526509988899999999740589999999999999999999999999808998887767766877
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 268999999999999977248899
Q gi|254780866|r 450 RERCMVYPIAVLTVFFGIYPVPIR 473 (499)
Q Consensus 450 ~~~~~~~~l~~~~i~lGi~p~~~~ 473 (499)
T Consensus 417 ~m~~p~~~L~~~si~~G~~~~~~~ 440 (566)
T MTH00151 417 YVSFPMLLLSIGAIVGGFFLQSLF 440 (566)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 789999999999999999999987