HHsearch alignment for GI: 254780866 and conserved domain: MTH00196
>MTH00196 ND2 NADH dehydrogenase subunit 2; Provisional.
Probab=100.00 E-value=0 Score=508.32 Aligned_cols=352 Identities=21% Similarity=0.334 Sum_probs=309.3
Q ss_pred HHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 63024302654043311123431034312355312343-32321000113554455677666554432100010034432
Q gi|254780866|r 121 LESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS-ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYA 199 (499)
Q Consensus 121 ~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~-~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~ 199 (499)
T Consensus 2 ~~lG~l~lv~s~dl~~~~v~~El~~l~~y~Li~~~~~~~~~~eAa~KYfi~~~~~s~~lL~gi~lly~~tGs~~~~~l~~ 81 (365)
T MTH00196 2 VALGSLCLISSSNWLSVYLAIELSTLCLFILVAQKGGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGLTGGTHISYIEL 81 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 79999999999899999999999999999998548999899999999999999999999999999999982946999999
Q ss_pred HHCC----CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC
Q ss_conf 1013----303789999854103444554000232010100022223443333232233321110000111223310000
Q gi|254780866|r 200 MSKF----PFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFA 275 (499)
Q Consensus 200 ~~~~----~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~ 275 (499)
T Consensus 82 ~~~~~~~~~~~~~~~~~~li~~~l~~K~~~~PfH~WlPda~~~ap~~~salla-~~~K~~~~~il~~~~~--------~~ 152 (365)
T MTH00196 82 LLNSGQSFSEVRVPIGYLLITVALLFKLSVAPFHMWAPDVYEGAPTTTTALLA-IVPKVGVFSILVSIGL--------PV 152 (365)
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHHHHHHHHHHHHH--------HH
T ss_conf 97355444047899999999999999845265556777646799879999999-9999999999999857--------89
Q ss_pred CHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC
Q ss_conf 00000122222122111000024432233210013540233310487542210234555421023330356777764200
Q gi|254780866|r 276 PVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLH 355 (499)
Q Consensus 276 ~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g 355 (499)
T Consensus 153 ~~~~~~~~~s~i~G~~~al~Q~dlKrllAYSSIsh~G~i~l~i~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~--~~~ 230 (365)
T MTH00196 153 NILLVGALFSLFVGALGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESLQASLVYLFLYIIMSICVFSIILAL--GVY 230 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCC
T ss_conf 999999999999999999864355745766888799999999998317899999999999999999999999999--814
Q ss_pred CCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 11110023556542023320134555530102444311228999999986599-99999999999999999999999728
Q gi|254780866|r 356 TRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSNT-VAVLASFGVVLSALYSLWLYRKVVFG 434 (499)
Q Consensus 356 ~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~~-~~~~~~~~~~ls~~~~l~~~~~~~~g 434 (499)
T Consensus 231 ~~~i~~~~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~~K~~il~~~~~~~~~~~~~~~~~~s~ls~~Yylrl~~~~~f~ 310 (365)
T MTH00196 231 KNLLVEFSGLSRRLPFLALTLALTFLSIAGIPPLVGFLGKWLVLLSGVVSQYYLIFLLAVVCSVIAGVYYVRIVKIIFFQ 310 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 78999997178873999999999999986535344589999999999986879999999999999999999999999908
Q ss_pred CCCCCC-----CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 898765-----5568788912689999999999999772488999999999999
Q gi|254780866|r 435 VSKCEK-----VQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRDTFSVPLSSI 483 (499)
Q Consensus 435 ~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~~~~~~~~~l 483 (499)
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~i~~~~i~P~~ll~~~~~~~~~l 364 (365)
T MTH00196 311 ANSFLLISTKALKKENKINLRKALLIGASLYLIGFTILSPNLLFQLAHWAIGGL 364 (365)
T ss_pred CCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC
T ss_conf 997543332654013677588999999999999999858799999999998751