HHsearch alignment for GI: 254780866 and conserved domain: MTH00199
>MTH00199 ND2 NADH dehydrogenase subunit 2; Provisional.
Probab=100.00 E-value=0 Score=545.89 Aligned_cols=386 Identities=20% Similarity=0.327 Sum_probs=337.2
Q ss_pred EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 65225889999999999999997520112100235678999863024302654043311123431034312355312343
Q gi|254780866|r 79 LGVDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS 158 (499)
Q Consensus 79 l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~ 158 (499)
T Consensus 61 ~~~d~~~~~~k~~~~~~~~~~~~~---~~~~~~~e~~~l~L~~~~Gm~~~vss~dli~lfl~lEl~sl~~Y~L~~~~r~~ 137 (454)
T MTH00199 61 LLINGWVLISKLIIIIGSISILLM---GLKESLFSVPVLILIVALGSLLLVSSINWLSIYLALELQTLSLFILVALKRDS 137 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 347489999999999999999998---46656268999999999999999986269999999999999999999836898
Q ss_pred -CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -3232100011355445567766655443210001003443210133037899998541034445540002320101000
Q gi|254780866|r 159 -ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHV 237 (499)
Q Consensus 159 -~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~ 237 (499)
T Consensus 138 ~~s~eAalKYfilg~~~s~~lL~Gi~liY~~tGs~~~~~i~~~~~~-----~~g~~li~~gl~fK~a~~PfH~W~PDvYe 212 (454)
T MTH00199 138 AYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGINSLLSG-----DVGKILITISLLFKLSAAPFHMWAPDVYE 212 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHCCCCCCHHHHHC
T ss_conf 5589999999999878899999999999999578049999998864-----57899999999999966323154157757
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHH
Q ss_conf 22223443333232233321110000111223310000000001222221221110000244322332100135402333
Q gi|254780866|r 238 QAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIG 317 (499)
Q Consensus 238 ~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~ 317 (499)
T Consensus 213 gaPt~vta~la-~~~Kia~~~~l~~~~~--------~~~il~~~~~lSmi~G~l~Al~Q~diKRlLAYSSIsh~Gyil~g 283 (454)
T MTH00199 213 GAPTITTALLA-TVPKIGVFSILVQIGP--------VTNVVLWCAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFG 283 (454)
T ss_pred CCCHHHHHHHH-HHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99789999999-9999999999999888--------99999999999999999999821436799999999899999999
Q ss_pred HCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHH
Q ss_conf 10487542210234555421023330356777764200111100235565420233201345555301024443112289
Q gi|254780866|r 318 IFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFL 397 (499)
Q Consensus 318 l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~ 397 (499)
T Consensus 284 l~~~~~~g~~~~l~y~~~y~~~~~~~F~~i~~~~~--~~~~i~~l~GL~~~~P~~a~~~~i~~lSlaGiPP~~GF~~K~~ 361 (454)
T MTH00199 284 VAIGSFESIQASLIYMIIYVIMSICSFSIILSLKL--RRGLIVELSGLSRKNPVMALTLALTFLSIAGIPPLAGFLSKWL 361 (454)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 99754578999999999999999999999999982--7526999874875489999999999999839741202999999
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-----CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999986599-99999999999999999999999728898765-----5568788912689999999999999772488
Q gi|254780866|r 398 VIMSVFQNSNT-VAVLASFGVVLSALYSLWLYRKVVFGVSKCEK-----VQQLKDLSLRERCMVYPIAVLTVFFGIYPVP 471 (499)
Q Consensus 398 i~~~~~~~~~~-~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~ 471 (499)
T Consensus 362 i~~a~i~~g~~~laii~vl~Svis~~YYlRiik~myF~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~ilf~~i~P~~ 441 (454)
T MTH00199 362 ILLSGVSSGYYLICIVAVISSVIAGVYYVRVVQIIYFQADSPLLIWQKVLNREERLDLSKSILIGMTLFFILFLMISPNF 441 (454)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHH
T ss_conf 99999986959999999999999999999999999508996202310000001355467899999999999998808099
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780866|r 472 IRDTFSVPLSSI 483 (499)
Q Consensus 472 ~~~~~~~~~~~l 483 (499)
T Consensus 442 ll~~~~~~a~~L 453 (454)
T MTH00199 442 LLQITHDATIGL 453 (454)
T ss_pred HHHHHHHHHHHC
T ss_conf 999999997644