HHsearch alignment for GI: 254780866 and conserved domain: MTH00209

>MTH00209 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00  E-value=0  Score=501.01  Aligned_cols=398  Identities=19%  Similarity=0.272  Sum_probs=341.8

Q ss_pred             EEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH
Q ss_conf             998631348540546652258899999999999999975201121--002356789998630243026540433111234
Q gi|254780866|r   64 MIEYYHWIDYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFF  141 (499)
Q Consensus        64 ~~~~~~~~~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~  141 (499)
T Consensus        34 ~w~~~~~~~~~~~~~~~~D~~S~~f~~~v~~Is~~V~~yS~~YM~~d~~~~rF~~~l~lFv~sMl~Lv~s~Nl~~l~lGW  113 (565)
T MTH00209         34 EWELLELNSMSISFPLIIDWMSLSFSSVVLFISGSVMWFSNFYMAGEKFPNRFCLITLLFVLSMNFLIFVPNLISLLLGW  113 (565)
T ss_pred             EEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             86645667827387520584289999999999999999989970599981259999999999999999981599999999


Q ss_pred             HHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCC
Q ss_conf             31034312355312343323210001135544556776665544321000100344321013303789999854103444
Q gi|254780866|r  142 EASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAI  221 (499)
Q Consensus       142 El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~  221 (499)
T Consensus       114 eglGl~SylLI~~y~~~~s~~a~~~t~l~nRiGD~~lll~i~~~~-~~~~~~~~~~~~----~~~~~~~i~lll~laa~~  188 (565)
T MTH00209        114 DGLGLVSFCLVIYYQNSKSLSAGMITILSNRVGDACLILSIAGML-CFGNWNIFTLNY----QKGIGIVLSVLMVVAAMT  188 (565)
T ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_conf             999999999975409769999999999999999999999999999-976399999988----522899999999999987


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCC
Q ss_conf             554000232010100022223443333-2322333211100001112233100000000012222212211100002443
Q gi|254780866|r  222 KIPMFPFHTWLPNAHVQAPTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIK  300 (499)
Q Consensus       222 K~~~~PfH~WlP~~y~~ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~K  300 (499)
T Consensus       189 KSAQ~Pfh~WLP~A-MaaPTPVSALvHssTlVtAGVylliR~~~-~~~-~~~~~~~~ll~ig~~T~~~a~~~Al~q~DlK  265 (565)
T MTH00209        189 KSAQIPFSAWLPAA-MAAPTPVSALVHSSTLVTAGVYLMIRFSD-QFF-SSPFVGWYVLLIGSLTTLMASMVANFESDLK  265 (565)
T ss_pred             HHCCCCCCHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             62207673112787-46998099999987999976776645038-877-4599999999999999999999998444052


Q ss_pred             CCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH-HCCCCCCHHHHHHHHHHCCCCCHHHH
Q ss_conf             22332100135402333104875422102345554210233303567777642-00111100235565420233201345
Q gi|254780866|r  301 KLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDR-LHTRDIFAYGGLVHNMPRYAVVMMVF  379 (499)
Q Consensus       301 rllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~-~g~~~l~~l~Gl~~~~P~~~~~~~i~  379 (499)
T Consensus       266 kiiA~STlSQLG~M~~~iglg~~---~~a~fHL~~HA~fKalLFl~aG~vIh~~~~~QDir~mggl~~~~P~t~~~~~i~  342 (565)
T MTH00209        266 KVIALSTLSQLGLMMCSISLGGP---ELCLFHLVTHALFKALLFICAGNMIHSHGHSQDIRSVGMLWYQMPITSICLNIS  342 (565)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCHH---HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHH
T ss_conf             57662489899999999976719---999999998899999999704078860588641887559975229999999999


Q ss_pred             HHHHCCCHHHHHHCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             555301024443112289999999865--999999999999999999999999972889876555687889126899999
Q gi|254780866|r  380 TMANMGLPGTSGFIGEFLVIMSVFQNS--NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYP  457 (499)
Q Consensus       380 ~lsl~G~Pp~~GF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  457 (499)
T Consensus       343 ~lsL~G~PflsGFySKd~Ile~~~~~~~~~~~~~~~~~~~~~T~~Ys~Rl~~~~~~~~~~~~~~~~~~e~~~~m~~p~~~  422 (565)
T MTH00209        343 NLALCGIPFLAGFYSKDLILESMLESKINFMTLIMFFIATALTVSYSLRMSYFSLWGSNSSKSLSSLLEENKDMLKPMLV  422 (565)
T ss_pred             HHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             99985661640899999999999877627999999999999999999999999981899998723064477358999999


Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             999999997724889
Q gi|254780866|r  458 IAVLTVFFGIYPVPI  472 (499)
Q Consensus       458 l~~~~i~lGi~p~~~  472 (499)
T Consensus       423 L~~~Si~~G~~~~~~  437 (565)
T MTH00209        423 LTLGSIVGGSVLSWV  437 (565)
T ss_pred             HHHHHHHHHHHHHHH
T ss_conf             999999999999998