HHsearch alignment for GI: 254780866 and conserved domain: MTH00209
>MTH00209 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00 E-value=0 Score=501.01 Aligned_cols=398 Identities=19% Similarity=0.272 Sum_probs=341.8
Q ss_pred EEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH
Q ss_conf 998631348540546652258899999999999999975201121--002356789998630243026540433111234
Q gi|254780866|r 64 MIEYYHWIDYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFF 141 (499)
Q Consensus 64 ~~~~~~~~~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~ 141 (499)
T Consensus 34 ~w~~~~~~~~~~~~~~~~D~~S~~f~~~v~~Is~~V~~yS~~YM~~d~~~~rF~~~l~lFv~sMl~Lv~s~Nl~~l~lGW 113 (565)
T MTH00209 34 EWELLELNSMSISFPLIIDWMSLSFSSVVLFISGSVMWFSNFYMAGEKFPNRFCLITLLFVLSMNFLIFVPNLISLLLGW 113 (565)
T ss_pred EEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 86645667827387520584289999999999999999989970599981259999999999999999981599999999
Q ss_pred HHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCC
Q ss_conf 31034312355312343323210001135544556776665544321000100344321013303789999854103444
Q gi|254780866|r 142 EASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAI 221 (499)
Q Consensus 142 El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~ 221 (499)
T Consensus 114 eglGl~SylLI~~y~~~~s~~a~~~t~l~nRiGD~~lll~i~~~~-~~~~~~~~~~~~----~~~~~~~i~lll~laa~~ 188 (565)
T MTH00209 114 DGLGLVSFCLVIYYQNSKSLSAGMITILSNRVGDACLILSIAGML-CFGNWNIFTLNY----QKGIGIVLSVLMVVAAMT 188 (565)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_conf 999999999975409769999999999999999999999999999-976399999988----522899999999999987
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCC
Q ss_conf 554000232010100022223443333-2322333211100001112233100000000012222212211100002443
Q gi|254780866|r 222 KIPMFPFHTWLPNAHVQAPTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIK 300 (499)
Q Consensus 222 K~~~~PfH~WlP~~y~~ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~K 300 (499)
T Consensus 189 KSAQ~Pfh~WLP~A-MaaPTPVSALvHssTlVtAGVylliR~~~-~~~-~~~~~~~~ll~ig~~T~~~a~~~Al~q~DlK 265 (565)
T MTH00209 189 KSAQIPFSAWLPAA-MAAPTPVSALVHSSTLVTAGVYLMIRFSD-QFF-SSPFVGWYVLLIGSLTTLMASMVANFESDLK 265 (565)
T ss_pred HHCCCCCCHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 62207673112787-46998099999987999976776645038-877-4599999999999999999999998444052
Q ss_pred CCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH-HCCCCCCHHHHHHHHHHCCCCCHHHH
Q ss_conf 22332100135402333104875422102345554210233303567777642-00111100235565420233201345
Q gi|254780866|r 301 KLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDR-LHTRDIFAYGGLVHNMPRYAVVMMVF 379 (499)
Q Consensus 301 rllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~-~g~~~l~~l~Gl~~~~P~~~~~~~i~ 379 (499)
T Consensus 266 kiiA~STlSQLG~M~~~iglg~~---~~a~fHL~~HA~fKalLFl~aG~vIh~~~~~QDir~mggl~~~~P~t~~~~~i~ 342 (565)
T MTH00209 266 KVIALSTLSQLGLMMCSISLGGP---ELCLFHLVTHALFKALLFICAGNMIHSHGHSQDIRSVGMLWYQMPITSICLNIS 342 (565)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHH---HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHH
T ss_conf 57662489899999999976719---999999998899999999704078860588641887559975229999999999
Q ss_pred HHHHCCCHHHHHHCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 555301024443112289999999865--999999999999999999999999972889876555687889126899999
Q gi|254780866|r 380 TMANMGLPGTSGFIGEFLVIMSVFQNS--NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYP 457 (499)
Q Consensus 380 ~lsl~G~Pp~~GF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 457 (499)
T Consensus 343 ~lsL~G~PflsGFySKd~Ile~~~~~~~~~~~~~~~~~~~~~T~~Ys~Rl~~~~~~~~~~~~~~~~~~e~~~~m~~p~~~ 422 (565)
T MTH00209 343 NLALCGIPFLAGFYSKDLILESMLESKINFMTLIMFFIATALTVSYSLRMSYFSLWGSNSSKSLSSLLEENKDMLKPMLV 422 (565)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99985661640899999999999877627999999999999999999999999981899998723064477358999999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999997724889
Q gi|254780866|r 458 IAVLTVFFGIYPVPI 472 (499)
Q Consensus 458 l~~~~i~lGi~p~~~ 472 (499)
T Consensus 423 L~~~Si~~G~~~~~~ 437 (565)
T MTH00209 423 LTLGSIVGGSVLSWV 437 (565)
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999998