HHsearch alignment for GI: 254780866 and conserved domain: MTH00211
>MTH00211 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00 E-value=0 Score=548.36 Aligned_cols=400 Identities=21% Similarity=0.350 Sum_probs=352.9
Q ss_pred EEEEECC---CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHHCCCEEEEECCCCCHHH
Q ss_conf 9863134---854054665225889999999999999997520112--10023567899986302430265404331112
Q gi|254780866|r 65 IEYYHWI---DYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSI--QENFREYMIAFLVLESMVIGAFLSLDMLLFYI 139 (499)
Q Consensus 65 ~~~~~~~---~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~--~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v 139 (499)
T Consensus 55 ~~~~~w~~~~~~~i~~~~~~D~~S~~f~~~v~~is~~V~~yS~~YM~~d~~~~rF~~~l~lF~~sMl~Lv~s~Nl~~l~i 134 (595)
T MTH00211 55 LTGWEWLNLGGFSLNLSFRYDFYSIFFFVVALYVTWSILEFSLWYMSTDPNVNRFFKYLLLFLISMLILVSANNLFQLLI 134 (595)
T ss_pred EEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88615114488472765115830899999999999999999688737899957899999999999999999836999999
Q ss_pred HHHHCCCCCEEEEEECCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCC
Q ss_conf 3431034312355312343-323210001135544556776665544321000100344321013303789999854103
Q gi|254780866|r 140 FFEASLIPMFVIIGVWGGS-ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCS 218 (499)
Q Consensus 140 ~~El~~l~~~~Li~~~~~~-~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g 218 (499)
T Consensus 135 gWEgvgl~SylLI~~~~~r~~a~~aa~~a~i~nriGd~~lll~i~~l~~~~~s~~~~~i~~~~---~~~~~~~~~~l~la 211 (595)
T MTH00211 135 GWEGVGIMSFLLISWWYGRSDANTAALQAIIYNRIGDIGLILSMFWLLMNLNSWTMQQLFILS---DMVNTLPLLGFLLA 211 (595)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC---CHHHHHHHHHHHHH
T ss_conf 999999999998923189589999999999999389999999999999992772499998636---43889999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEC
Q ss_conf 44455400023201010002222344333-32322333211100001112233100000000012222212211100002
Q gi|254780866|r 219 FAIKIPMFPFHTWLPNAHVQAPTAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQT 297 (499)
Q Consensus 219 ~~~K~~~~PfH~WlP~~y~~ap~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~ 297 (499)
T Consensus 212 a~~KSAQfPlh~WLP~A-M~aPTPVSALlHsstmV~AGvylliR~~-~~~~-~~~~~~~~~l~lG~lT~l~a~~~Al~q~ 288 (595)
T MTH00211 212 AMGKSAQFGLHPWLPAA-MEGPTPVSALLHSSTMVVAGVFLLIRLS-PLIL-NNFLVLGAVLCLGALTTLFAALCALTQN 288 (595)
T ss_pred HHHHHCCCCCCHHHHHH-HCCCCCHHHHHHHHHHHHCCHHHEECCC-HHHH-HCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99874316572545876-0699928999987589980631001105-2744-1789999999999999999999998777
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH-CCCCCCHHHHHHHHHHCCCCCH
Q ss_conf 443223321001354023331048754221023455542102333035677776420-0111100235565420233201
Q gi|254780866|r 298 DIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRL-HTRDIFAYGGLVHNMPRYAVVM 376 (499)
Q Consensus 298 d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~-g~~~l~~l~Gl~~~~P~~~~~~ 376 (499)
T Consensus 289 DiKkilAyST~SQlG~M~~aiglg~~---~~a~fHl~~HA~fKalLFL~aG~iIh~~~~~qDir~mGgl~~~mP~t~~~~ 365 (595)
T MTH00211 289 DMKKIVAFSTTSQLGLMVVALGLGQP---QLAFLHICTHAFFKAMLFLCSGSIIHSLNNEQDIRKMGGLSKALPFTSSCL 365 (595)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHH
T ss_conf 78788874269888899999876589---999999997899999999831288774477137987079887638999999
Q ss_pred HHHHHHHCCCHHHHHHCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 345555301024443112289999999865--999999999999999999999999972889876555687889126899
Q gi|254780866|r 377 MVFTMANMGLPGTSGFIGEFLVIMSVFQNS--NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCM 454 (499)
Q Consensus 377 ~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 454 (499)
T Consensus 366 ~ig~lsL~G~P~lsGF~SKD~IlE~~~~s~~n~~~l~l~liat~lTa~YS~Rli~~v~~~~~~~~~~~~~~e~~~~~~~P 445 (595)
T MTH00211 366 IIGSLALMGFPFLAGFFSKDSILENMNMSNLNSWALLLTLLATSLTAAYSLRLIYLSLGGNPRMLPLSPINEENNSLKNP 445 (595)
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99999984676002251168999999866246999999999999999999999999994898899888888998899999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999977248899
Q gi|254780866|r 455 VYPIAVLTVFFGIYPVPIR 473 (499)
Q Consensus 455 ~~~l~~~~i~lGi~p~~~~ 473 (499)
T Consensus 446 l~~La~~Si~~G~~~~~~~ 464 (595)
T MTH00211 446 LKRLAYGSIIGGVFFTLFL 464 (595)
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999888