HHsearch alignment for GI: 254780866 and conserved domain: PRK02504
>PRK02504 NAD(P)H-quinone oxidoreductase subunit 2; Provisional.
Probab=100.00 E-value=0 Score=609.40 Aligned_cols=461 Identities=19% Similarity=0.303 Sum_probs=382.0
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEEHHH
Q ss_conf 89999999999999987203553035799999999999999999999863088881899986313485405466522588
Q gi|254780866|r 6 LSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLGVDGIS 85 (499)
Q Consensus 6 l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iD~ls 85 (499)
T Consensus 18 Peiil~~~~l~~Ll~~l~~~~~~-~~~~~~----is~~~l~~~~~~l~~~~~~~~~~~-----------f~g~~~~D~~s 81 (514)
T PRK02504 18 PEGIVLLTLLGVLLVDLIGGRTA-SRWLPY----IAIAGLGAALVLLALQWDNPNPIS-----------FLGAFNADNLS 81 (514)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCC-CHHHHH----HHHHHHHHHHHHHHHHHCCCCCCC-----------CCCCEEECHHH
T ss_conf 99999999999999999557430-079999----999999999999999955887521-----------02624436577
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCH---HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECC-CCCCC
Q ss_conf 9999999999999997520112100---2356789998630243026540433111234310343123553123-43323
Q gi|254780866|r 86 ILLVVLTTFLTPFCILSSWKSIQEN---FREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWG-GSERI 161 (499)
Q Consensus 86 ~~f~~l~~~i~~l~~~ys~~~~~~~---~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~-~~~~~ 161 (499)
T Consensus 82 ~~~~~ii~~~~~l~~l~S~~y~~~~~~~~~ef~~llL~~~lG~~~l~~s~dLi~lfv~~El~sl~sY~Li~~~~~~~~s~ 161 (514)
T PRK02504 82 IAFRAIIALSTLVTLLMSWRYVEQSGTPLGEFAAILLTATLGGMFLCGATDLVMIFISLETLSIASYLLSGYMKRDPRSS 161 (514)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99999999999999999999986178650599999999999999999971799999999999999999988754997899
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHC-CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2100011355445567766655443210-0010034432101-3303789999854103444554000232010100022
Q gi|254780866|r 162 YAAYKFFLYTFFGSIFMLFAIVVMCWEK-KTSSIIDLYAMSK-FPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQA 239 (499)
Q Consensus 162 ~aa~ky~i~~~~~s~~lL~g~~~l~~~~-gs~~~~~~~~~~~-~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~a 239 (499)
T Consensus 162 eAalKYfllg~~~s~~lL~Gi~llYg~t~g~~~l~~i~~~~~~~~~~~~~~~l~lil~G~~fK~a~~PfH~WlPDay~gA 241 (514)
T PRK02504 162 EAALKYLLIGAASAAIFLYGSSLLYGLSGGSTQLDAIALALITSPSLLLALALVFVLAGIAFKIAAVPFHQWTPDVYEGS 241 (514)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
T ss_conf 99999999988889999999999999970768899999987558628999999999999999974166543654576488
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 22344333323223332111000011122331000000000122222122111000024432233210013540233310
Q gi|254780866|r 240 PTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIF 319 (499)
Q Consensus 240 p~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~ 319 (499)
T Consensus 242 Ptpvsa~ls~~~k~a~~~llir~~~~~~~~~~~~~~~il~ilailSmi~G~l~Al~Q~diKRlLAYSSIsh~Gyillgl~ 321 (514)
T PRK02504 242 PTPVVAFLSVGSKAAGFALAIRLLVTAFPAFDEQWKLLFTVLAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLV 321 (514)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 67899999999999999999999998364247889999999999999988899999987749999989989999999999
Q ss_pred CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHH
Q ss_conf 48754221023455542102333035677776420011110023556542023320134555530102444311228999
Q gi|254780866|r 320 SGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVI 399 (499)
Q Consensus 320 ~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~ 399 (499)
T Consensus 322 ~gt~~g~~a~i~yl~~y~~~~~~~F~~i~~~~~~~gt~~i~~l~GL~~~~P~~a~~~~i~~lSLaGiPP~~GF~~K~~if 401 (514)
T PRK02504 322 AGTEAGYASMVLYLLAYLFMNLGAFACVILFSLRTGTDRISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLF 401 (514)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 66588999999999999999999999999999745844499861968774999999999999999787987999999999
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCCCCCCH------HHHHHHHHHHHHHHHHHHH
Q ss_conf 999986599-99999999999999999999999728898765--55687889126------8999999999999977248
Q gi|254780866|r 400 MSVFQNSNT-VAVLASFGVVLSALYSLWLYRKVVFGVSKCEK--VQQLKDLSLRE------RCMVYPIAVLTVFFGIYPV 470 (499)
Q Consensus 400 ~~~~~~~~~-~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~--~~~~~~~~~~~------~~~~~~l~~~~i~lGi~p~ 470 (499)
T Consensus 402 ~a~~~~g~~~la~~~~l~Svis~~YYlRii~~m~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~ 481 (514)
T PRK02504 402 WAGWQAGQYLLVLVGLVTSVISIYYYIRVIKMMVVKEPQEMSDVVKNYPEINWNLPGMPPLRVGLVLCVIATALAGILSN 481 (514)
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999493999999999999999999999999937998444532236898864345776089999999999998352761
Q ss_pred HHHHHHHHHHHH
Q ss_conf 899999999999
Q gi|254780866|r 471 PIRDTFSVPLSS 482 (499)
Q Consensus 471 ~~~~~~~~~~~~ 482 (499)
T Consensus 482 p~~~~~~~av~~ 493 (514)
T PRK02504 482 PLFTLANTAVAG 493 (514)
T ss_pred HHHHHHHHHHHC
T ss_conf 699998877406