Query gi|254780866|ref|YP_003065279.1| NADH dehydrogenase subunit M [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 499
No_of_seqs 160 out of 7745
Neff 7.8
Searched_HMMs 39220
Date Tue May 31 15:56:03 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780866.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01972 NDH_I_M proton-trans 100.0 0 0 785.5 17.4 481 6-486 1-531 (532)
2 PRK05846 NADH dehydrogenase su 100.0 0 0 723.3 21.6 485 1-488 1-491 (495)
3 PRK02546 NAD(P)H-quinone oxido 100.0 0 0 716.3 19.0 484 2-488 8-504 (531)
4 CHL00011 ndhD NADH dehydrogena 100.0 0 0 708.0 20.7 486 1-490 1-500 (500)
5 COG1008 NuoM NADH:ubiquinone o 100.0 0 0 705.0 20.5 486 1-490 1-489 (497)
6 PRK06473 NAD(P)H-quinone oxido 100.0 0 0 703.2 20.2 489 5-496 1-494 (500)
7 PRK07691 putative monovalent c 100.0 0 0 699.4 17.6 487 1-499 3-496 (498)
8 PRK07363 NAD(P)H-quinone oxido 100.0 0 0 693.7 20.9 484 5-491 1-489 (499)
9 PRK12663 putative monovalent c 100.0 0 0 694.0 20.0 487 1-499 1-492 (497)
10 MTH00204 ND4 NADH dehydrogenas 100.0 0 0 695.1 18.0 472 5-481 2-480 (486)
11 PRK12561 NAD(P)H-quinone oxido 100.0 0 0 696.0 16.1 460 28-489 2-474 (495)
12 MTH00217 ND4 NADH dehydrogenas 100.0 0 0 691.8 18.1 472 5-481 1-477 (482)
13 PRK08376 putative monovalent c 100.0 0 0 690.2 19.0 491 1-499 1-511 (513)
14 PRK12667 putative monovalent c 100.0 0 0 683.5 18.6 491 1-498 1-515 (517)
15 PRK08377 NADH dehydrogenase su 100.0 0 0 682.9 18.9 483 1-498 1-487 (493)
16 TIGR01974 NDH_I_L proton-trans 100.0 0 0 681.4 20.1 465 5-474 2-519 (691)
17 PRK12662 putative monovalent c 100.0 0 0 675.3 18.6 477 1-484 1-490 (491)
18 PRK12665 putative monovalent c 100.0 0 0 675.7 18.2 486 1-499 1-523 (524)
19 PRK12666 putative monovalent c 100.0 0 0 673.5 16.7 485 1-499 3-498 (509)
20 PRK06521 hydrogenase 4 subunit 100.0 0 0 668.1 17.2 479 2-486 3-508 (670)
21 PRK08668 NADH dehydrogenase su 100.0 0 0 667.3 15.9 468 5-484 2-485 (616)
22 PRK08375 putative monovalent c 100.0 0 0 663.3 17.4 472 1-481 2-481 (481)
23 PRK12645 monovalent cation/H+ 100.0 0 0 661.3 18.3 475 4-485 2-509 (800)
24 PRK12649 putative monovalent c 100.0 0 0 659.5 18.0 477 3-487 4-508 (800)
25 PRK12648 putative monovalent c 100.0 0 0 653.5 17.1 471 6-484 3-486 (950)
26 PRK06590 NADH dehydrogenase su 100.0 0 0 646.4 19.6 463 5-474 4-477 (619)
27 PRK12647 putative monovalent c 100.0 0 0 651.3 13.8 426 59-488 39-474 (761)
28 PRK06525 hydrogenase 4 subunit 100.0 0 0 646.8 16.5 461 1-474 1-480 (480)
29 PRK06458 hydrogenase 4 subunit 100.0 0 0 646.9 16.2 467 1-484 1-490 (491)
30 PRK08667 hydrogenase membrane 100.0 0 0 641.6 14.8 464 3-477 3-494 (644)
31 PRK12644 putative monovalent c 100.0 0 0 638.6 17.4 471 6-486 2-485 (968)
32 PRK12646 putative monovalent c 100.0 0 0 635.1 16.2 474 4-484 2-508 (800)
33 PRK05777 NADH dehydrogenase su 100.0 0 0 633.2 16.0 466 1-483 6-477 (478)
34 PRK12650 putative monovalent c 100.0 0 0 628.5 16.3 468 8-486 3-487 (969)
35 PRK07390 NAD(P)H-quinone oxido 100.0 0 0 627.3 17.3 458 7-471 10-476 (615)
36 PRK07376 NAD(P)H-quinone oxido 100.0 0 0 625.3 18.3 462 4-473 6-518 (667)
37 TIGR00940 2a6301s01 monovalent 100.0 0 0 631.2 12.3 474 10-491 6-514 (809)
38 PRK06277 hydrogenase subunit F 100.0 0 0 627.5 15.7 468 1-483 1-476 (479)
39 PRK08676 hydrogenase membrane 100.0 0 0 623.8 13.7 444 28-483 19-483 (486)
40 CHL00025 ndhF NADH dehydrogena 100.0 0 0 615.6 18.7 458 4-469 6-560 (738)
41 COG1009 NuoL NADH:ubiquinone o 100.0 0 0 615.2 16.7 458 7-473 2-474 (606)
42 PRK06589 putative monovalent c 100.0 0 0 615.6 15.1 456 6-475 13-483 (484)
43 MTH00210 ND5 NADH dehydrogenas 100.0 0 0 608.3 18.1 457 7-471 3-473 (618)
44 MTH00020 ND5 NADH dehydrogenas 100.0 0 0 603.9 19.6 457 7-472 3-471 (608)
45 PRK02504 NAD(P)H-quinone oxido 100.0 0 0 609.4 12.9 461 6-482 18-493 (514)
46 PRK08042 formate hydrogenlyase 100.0 0 0 606.3 11.4 405 69-481 46-473 (593)
47 MTH00032 ND5 NADH dehydrogenas 100.0 0 0 589.4 18.9 457 7-470 3-526 (677)
48 PRK12668 putative monovalent c 100.0 0 0 598.7 9.7 435 9-480 8-444 (569)
49 MTH00014 ND4 NADH dehydrogenas 100.0 0 0 595.3 10.5 446 8-475 2-450 (451)
50 MTH00044 ND4 NADH dehydrogenas 100.0 0 0 591.2 10.3 399 74-473 52-458 (460)
51 CHL00049 ndhB NADH dehydrogena 100.0 0 0 585.6 14.2 454 14-480 25-497 (498)
52 MTH00206 ND4 NADH dehydrogenas 100.0 0 0 588.0 11.6 444 8-473 2-450 (452)
53 COG0651 HyfB Formate hydrogenl 100.0 0 0 581.5 15.3 476 1-485 1-490 (504)
54 MTH00068 ND4 NADH dehydrogenas 100.0 0 0 573.6 10.8 399 75-475 52-457 (458)
55 MTH00150 ND4 NADH dehydrogenas 100.0 0 0 572.2 9.9 398 74-475 46-446 (447)
56 MTH00110 ND4 NADH dehydrogenas 100.0 0 0 569.7 9.9 398 76-475 53-457 (459)
57 MTH00124 ND4 NADH dehydrogenas 100.0 0 0 567.1 9.0 398 75-474 52-456 (457)
58 MTH00066 ND5 NADH dehydrogenas 100.0 0 0 556.2 17.0 399 65-473 61-469 (598)
59 PRK07234 putative monovalent c 100.0 0 0 557.1 15.2 416 1-471 1-416 (456)
60 MTH00004 ND5 NADH dehydrogenas 100.0 0 0 551.7 18.6 397 65-471 63-469 (604)
61 MTH00114 consensus 100.0 0 0 553.8 16.4 399 64-471 58-466 (600)
62 MTH00127 ND4 NADH dehydrogenas 100.0 0 0 556.3 10.1 399 74-474 52-457 (459)
63 MTH00211 ND5 NADH dehydrogenas 100.0 0 0 548.4 16.1 400 65-473 55-464 (595)
64 TIGR01770 NDH_I_N proton-trans 100.0 0 0 548.6 12.3 394 79-472 71-490 (491)
65 PRK06591 putative monovalent c 100.0 0 0 549.8 10.6 411 5-438 7-431 (433)
66 MTH00199 ND2 NADH dehydrogenas 100.0 0 0 545.9 12.1 386 79-483 61-453 (454)
67 MTH00205 ND4 NADH dehydrogenas 100.0 0 0 552.6 4.6 399 73-473 48-451 (452)
68 MTH00137 ND5 NADH dehydrogenas 100.0 0 0 534.1 16.4 398 64-469 66-473 (611)
69 COG1007 NuoN NADH:ubiquinone o 100.0 0 0 531.1 14.8 403 79-483 64-474 (475)
70 MTH00163 ND4 NADH dehydrogenas 100.0 0 0 530.6 4.8 394 75-474 48-444 (446)
71 MTH00208 ND5 NADH dehydrogenas 100.0 0 0 520.3 13.4 421 43-469 66-496 (631)
72 MTH00108 ND5 NADH dehydrogenas 100.0 0 0 515.4 17.1 400 65-473 63-472 (602)
73 MTH00165 ND5 NADH dehydrogenas 100.0 0 0 510.3 14.5 407 56-471 25-437 (571)
74 MTH00151 ND5 NADH dehydrogenas 100.0 0 0 499.5 15.2 406 56-473 29-440 (566)
75 MTH00209 ND5 NADH dehydrogenas 100.0 0 0 501.0 13.6 398 64-472 34-437 (565)
76 MTH00196 ND2 NADH dehydrogenas 100.0 0 0 508.3 4.8 352 121-483 2-364 (365)
77 MTH00207 ND5 NADH dehydrogenas 100.0 0 0 497.1 13.9 404 57-472 31-440 (572)
78 PRK06459 hydrogenase 4 subunit 100.0 0 0 500.0 3.7 375 80-480 40-435 (578)
79 TIGR00944 2a6301s04 Multicompo 100.0 0 0 492.0 9.9 455 6-464 3-502 (504)
80 PRK12664 putative monovalent c 100.0 0 0 497.3 1.2 369 76-472 29-404 (530)
81 MTH00095 ND5 NADH dehydrogenas 100.0 0 0 482.3 5.4 376 74-468 36-417 (527)
82 TIGR01960 ndhF3_CO2 NAD(P)H de 100.0 0 0 462.9 14.7 464 1-471 1-476 (613)
83 KOG4845 consensus 100.0 0 0 449.9 14.2 446 15-475 4-450 (452)
84 pfam00361 Oxidored_q1 NADH-Ubi 100.0 0 0 464.4 -5.7 268 131-401 1-269 (270)
85 MTH00094 ND4 NADH dehydrogenas 100.0 0 0 455.7 1.1 349 76-442 37-386 (409)
86 MTH00096 consensus 100.0 0 0 438.4 2.1 369 72-468 18-388 (476)
87 MTH00063 ND5 NADH dehydrogenas 100.0 0 0 429.7 6.8 356 58-436 17-377 (519)
88 MTH00062 ND4 NADH dehydrogenas 100.0 0 0 415.7 3.9 349 76-436 40-389 (419)
89 MTH00112 ND2 NADH dehydrogenas 100.0 0 0 417.5 1.7 337 112-472 3-342 (345)
90 MTH00198 ND2 NADH dehydrogenas 100.0 0 0 417.6 -0.3 362 108-479 169-592 (596)
91 MTH00200 ND2 NADH dehydrogenas 100.0 0 0 413.4 3.1 307 112-442 4-311 (343)
92 PRK08168 NADH dehydrogenase su 100.0 0 0 401.6 12.8 321 17-355 14-339 (514)
93 MTH00041 ND2 NADH dehydrogenas 100.0 0 0 408.4 3.1 302 111-437 1-304 (350)
94 MTH00070 ND2 NADH dehydrogenas 100.0 0 0 401.2 3.4 337 112-472 4-343 (346)
95 MTH00105 ND2 NADH dehydrogenas 100.0 0 0 400.8 2.2 337 111-471 3-343 (345)
96 MTH00011 ND2 NADH dehydrogenas 100.0 0 0 395.9 2.1 327 112-469 6-333 (333)
97 PRK08601 NADH dehydrogenase su 100.0 0 0 387.4 9.9 332 2-355 3-340 (506)
98 MTH00135 ND2 NADH dehydrogenas 100.0 0 0 391.4 3.9 333 115-472 7-343 (347)
99 MTH00144 ND2 NADH dehydrogenas 100.0 0 0 390.2 0.0 297 110-439 4-301 (329)
100 MTH00160 ND2 NADH dehydrogenas 100.0 0 0 374.9 1.9 327 114-473 6-333 (336)
101 MTH00197 ND2 NADH dehydrogenas 100.0 0 0 370.2 2.3 297 112-440 2-299 (325)
102 KOG4668 consensus 100.0 0 0 272.2 6.3 313 110-433 2-317 (355)
103 PRK06588 putative monovalent c 100.0 9E-41 2.8E-45 240.7 5.5 323 86-427 25-352 (504)
104 MTH00091 ND2 NADH dehydrogenas 99.3 6.8E-14 1.7E-18 93.4 -2.9 229 128-421 7-235 (273)
105 pfam10125 NADHdeh_related NADH 98.5 4.4E-07 1.1E-11 56.1 6.3 155 75-234 16-188 (219)
106 COG4078 Predicted membrane pro 98.1 3.7E-06 9.5E-11 51.0 4.9 159 73-235 14-190 (221)
107 MTH00059 ND2 NADH dehydrogenas 98.0 5.8E-07 1.5E-11 55.4 -1.2 252 127-428 20-275 (288)
108 pfam00662 Oxidored_q1_N NADH-U 97.6 0.00016 4E-09 42.1 5.7 54 66-119 6-61 (62)
109 pfam01059 Oxidored_q5_N NADH-u 88.1 1.4 3.5E-05 20.5 7.8 36 74-109 52-87 (110)
110 COG0650 HyfC Formate hydrogenl 76.1 4.2 0.00011 17.8 7.9 74 156-229 122-200 (309)
111 pfam00420 Oxidored_q2 NADH-ubi 64.9 1.2 2.9E-05 20.9 -1.0 37 118-154 7-44 (96)
112 PRK05715 NADH dehydrogenase su 44.1 3.1 7.8E-05 18.6 -1.6 28 121-148 14-41 (99)
113 pfam11455 DUF3018 Protein of u 40.6 8.7 0.00022 16.1 0.2 16 222-237 14-29 (65)
114 PRK06076 NADH dehydrogenase su 37.9 22 0.00056 13.9 7.3 99 138-238 118-224 (335)
115 COG0713 NuoK NADH:ubiquinone o 32.6 5.8 0.00015 17.1 -1.7 81 119-199 13-97 (100)
116 pfam07830 PP2C_C Protein serin 25.4 37 0.00093 12.7 2.2 28 377-404 53-80 (81)
117 CHL00015 ndhE NADH dehydrogena 22.1 16 0.00041 14.6 -1.0 28 120-147 13-40 (101)
118 MTH00180 ND4L NADH dehydrogena 21.0 29 0.00075 13.2 0.1 33 119-151 11-44 (99)
119 pfam06942 GlpM GlpM protein. T 20.9 32 0.00082 13.0 0.3 50 144-193 29-80 (107)
120 PRK08389 putative monovalent c 20.6 35 0.0009 12.8 0.5 15 81-95 65-79 (111)
No 1
>TIGR01972 NDH_I_M proton-translocating NADH-quinone oxidoreductase, chain M; InterPro: IPR010227 This entry describes the 13th (based on Escherichia coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex.; GO: 0008137 NADH dehydrogenase (ubiquinone) activity, 0042773 ATP synthesis coupled electron transport.
Probab=100.00 E-value=0 Score=785.50 Aligned_cols=481 Identities=51% Similarity=0.941 Sum_probs=461.8
Q ss_pred HHHHHHHHHHHHHHHHHHHCCC-CCHHH---HHHHHHHHHHHHHHHHHHHHHH-HCCCCC--EEEEEEEEECCCC--CEE
Q ss_conf 8999999999999998720355-30357---9999999999999999999986-308888--1899986313485--405
Q gi|254780866|r 6 LSIVTFLPFLGVFVILFSSYLG-CGRRS---FFGVALGISTINFIFSLFVWSV-FDKGRS--SFQMIEYYHWIDY--FCS 76 (499)
Q Consensus 6 l~lii~lPll~~li~~~~~~~~-~~~~~---~~~i~~~~~~l~l~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~--~~~ 76 (499)
||+++++|++|++++++.+..+ +.+++ .+.++...+...++.++.++.. ||..+. .+|+.|...|++. +++
T Consensus 1 Ls~~iflPligal~~l~~~~~~~~~~~~~~~~r~~Al~~~~~~l~l~~~l~~~~fD~~~~~~~fQ~~e~~~Wip~~lG~~ 80 (532)
T TIGR01972 1 LSLLIFLPLIGALLILLLPRQNNKGKAREQAVRWIALVVALATLLLSLLLLFQEFDPTNSGPGFQFTESLPWIPADLGIS 80 (532)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCEE
T ss_conf 86999899999999998345677602589999999999999999999999860433456644401577311223455704
Q ss_pred EEEEEEHHHHHHHHHHHHHHHHHHHHHCCC--CCC--HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEE
Q ss_conf 466522588999999999999999752011--210--0235678999863024302654043311123431034312355
Q gi|254780866|r 77 YHLGVDGISILLVVLTTFLTPFCILSSWKS--IQE--NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVII 152 (499)
Q Consensus 77 ~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~--~~~--~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li 152 (499)
+++++||+|.+++.++++++.++.+++++. .++ |.|+|+.+++.+.++++|+|+|.|++.||+|||.+.+|.|++|
T Consensus 81 Y~lGVDGiSl~l~~LtaLlt~l~~~~~w~~R~i~k~g~~k~f~~~~L~le~~~~G~F~A~D~~LFY~FwE~~LiPmyllI 160 (532)
T TIGR01972 81 YHLGVDGISLLLVLLTALLTLLSILASWESREIQKEGRVKEFYALLLLLEAGVIGVFLALDLLLFYVFWEAMLIPMYLLI 160 (532)
T ss_pred EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 64203279999999999999999998654401047885799999999999999999999989999999999998899998
Q ss_pred EECC-----CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC------CCCHHHHHHHH-CCCHHHHHHHHHHHHCCCC
Q ss_conf 3123-----4332321000113554455677666554432100------01003443210-1330378999985410344
Q gi|254780866|r 153 GVWG-----GSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKK------TSSIIDLYAMS-KFPFSIQYWMWIAFFCSFA 220 (499)
Q Consensus 153 ~~~~-----~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~g------s~~~~~~~~~~-~~~~~~~~~~~~ll~~g~~ 220 (499)
+.|| +++|.+||.|+++|+..||.++|.|+..+|..+| |+|+.++.+.. +.+...|.+.+..+++||+
T Consensus 161 g~WGdka~~g~~R~yAA~KFfLYTl~GSvlML~a~l~l~~~~g~~~~~~tF~l~~l~~~~~~~~~~~q~~Lf~aFf~aFA 240 (532)
T TIGR01972 161 GVWGDKAEAGPNRIYAAMKFFLYTLAGSVLMLLAILGLYFLGGTQLLILTFDLAELLNQPVNLPLSVQTWLFLAFFIAFA 240 (532)
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 64110013646523788999999999999999999999998234111210342887402136419999999999999855
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCC
Q ss_conf 45540002320101000222234433332322333211100001112233100000000012222212211100002443
Q gi|254780866|r 221 IKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIK 300 (499)
Q Consensus 221 ~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~K 300 (499)
+|+++||||+||||+|+||||++|.+|+|+..|+|.||++|+..|++|+++.++.+++.++|+++++||++.|+.|+|+|
T Consensus 241 vK~PlfPlHTWLPDAH~~Apt~gSV~LaGvLlK~G~YGflRf~LpLfPdas~~f~p~~~~L~~~~IiYgal~A~aQ~D~K 320 (532)
T TIGR01972 241 VKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALAVIAIIYGALIALAQTDIK 320 (532)
T ss_pred HCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 22477665334320310277468999999999888899999876544999999999999999999999999999986288
Q ss_pred CCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH----HHHCCCCCH
Q ss_conf 2233210013540233310487542210234555421023330356777764200111100235565----420233201
Q gi|254780866|r 301 KLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVH----NMPRYAVVM 376 (499)
Q Consensus 301 rllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~----~~P~~~~~~ 376 (499)
|++||||||||||+++|+.+.|+.|++||++|++||++..+.||+++|.+|+|.||||++++||+.+ +||+.+..+
T Consensus 321 rLiAYSSiSHMGfV~LGifs~n~~G~~GA~~qM~~HGl~~a~LFl~vG~ly~R~hTr~i~~~GGl~~hp~~~mP~~~~f~ 400 (532)
T TIGR01972 321 RLIAYSSISHMGFVLLGIFSFNELGISGAVLQMISHGLITAALFLLVGVLYDRAHTRDIAKYGGLANHPYRKMPVLAAFF 400 (532)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 99998635799999999997618899999999998669999999999999863243337862513430211114799999
Q ss_pred HHHHHHHCCCHHHHHHCCHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----------CCC
Q ss_conf 3455553010244431122899999998-------6599999999999999999999999997288-----------987
Q gi|254780866|r 377 MVFTMANMGLPGTSGFIGEFLVIMSVFQ-------NSNTVAVLASFGVVLSALYSLWLYRKVVFGV-----------SKC 438 (499)
Q Consensus 377 ~i~~lsl~G~Pp~~GF~~k~~i~~~~~~-------~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~-----------~~~ 438 (499)
.++.+|..|+|+++||+||++++.++++ .+++.++++.++.+++|.|.+..++|+++|+ ...
T Consensus 401 ~~~~~As~GlPGt~GFvGEFl~l~G~f~~~~~S~P~~~~~~~~A~~G~vl~A~Y~L~~~~r~~fG~~~P~~~~~~~~~~~ 480 (532)
T TIGR01972 401 MLFAMASLGLPGTSGFVGEFLILLGAFKSDILSFPVNPVVAFLAALGIVLTAAYMLWLYKRVFFGERKPDSLYLQDKISN 480 (532)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 99999733200003499999999854167766755189999999999999999999999998517987853121022002
Q ss_pred ---CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ---655568788912689999999999999772488999999999999852
Q gi|254780866|r 439 ---EKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRDTFSVPLSSIIEN 486 (499)
Q Consensus 439 ---~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~~~~~~~~~l~~~ 486 (499)
++.++.+|+..||..+..+++++++.+|+||++++|.+++++++++++
T Consensus 481 ~~~~~~~~~~Dl~~rE~~~~~~lv~~~~~lGlyP~~~l~~~~~~v~~l~~~ 531 (532)
T TIGR01972 481 ISDPEVAEFPDLNGREIAVLAPLVVLILFLGLYPKPLLDLIEPSVNNLLSQ 531 (532)
T ss_pred CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 543134323675088999999999999999724568875578899999961
No 2
>PRK05846 NADH dehydrogenase subunit M; Reviewed
Probab=100.00 E-value=0 Score=723.26 Aligned_cols=485 Identities=54% Similarity=0.965 Sum_probs=452.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC-CCEEEEE
Q ss_conf 983078999999999999998720355303579999999999999999999986308888189998631348-5405466
Q gi|254780866|r 1 MNLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWID-YFCSYHL 79 (499)
Q Consensus 1 m~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 79 (499)
||+|+|++++++|+++++++.+.++. ++|..+.++...+...++.+...+..++......+..+...|.+ ..+++++
T Consensus 1 m~~plL~llVl~Pllgall~~l~~~~--~~~~~~~~a~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~w~~~~gi~~~l 78 (495)
T PRK05846 1 MNFPLLSILIFLPLIGGLLILLTERA--ARRLARWIALITTLLTLALSLVLWIGFDPSNPGFQFVEKVPWIPRFGISYHL 78 (495)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEE
T ss_conf 99769999999999999999997253--2789999999999999999999999974788864899864456666806898
Q ss_pred EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 52258899999999999999975201121002356789998630243026540433111234310343123553123433
Q gi|254780866|r 80 GVDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSE 159 (499)
Q Consensus 80 ~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~ 159 (499)
++|++|..+..++++++.++.+|++++++++.++|+.+++++.+++++++.|+|++++|++||++++++|.|+++|++++
T Consensus 79 ~~D~ls~~~~~l~~~v~~~~~l~s~~~~~~~~~~f~~~~ll~~~~m~g~~~a~dl~~~fvf~El~~i~sy~Li~~~~~~~ 158 (495)
T PRK05846 79 GVDGISLLLVVLTALLTPLAVLASWEEIKKRVKFYMAALLILEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGGKN 158 (495)
T ss_pred EECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 51087899999999999999999866314630189999999999999999976299999999999999999999759779
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHH-----HCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 23210001135544556776665544321-----0001003443210133037899998541034445540002320101
Q gi|254780866|r 160 RIYAAYKFFLYTFFGSIFMLFAIVVMCWE-----KKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPN 234 (499)
Q Consensus 160 ~~~aa~ky~i~~~~~s~~lL~g~~~l~~~-----~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~ 234 (499)
+.+|++||++++.+|+.+++.|+..+|.. +|++|+.++.+. +.+...+...+.++++|+++|+|++|||.|+||
T Consensus 159 ~~~Aa~ky~i~~~~gs~~~L~gi~~l~~~~~~~~~gs~~~~~l~~~-~~~~~~~~~~~~~~~~g~~~K~a~~PfH~WlPd 237 (495)
T PRK05846 159 RIYAATKFFLYTLLGSLLMLVAIIYLVVVYYNAGVGTFDIADLLNT-PLPAGVQYLLFLAFFIAFAVKMPMFPLHTWLPD 237 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
T ss_conf 9999999999999999999999999999996345401389999855-577258999999999999998622423322467
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHH
Q ss_conf 00022223443333232233321110000111223310000000001222221221110000244322332100135402
Q gi|254780866|r 235 AHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYV 314 (499)
Q Consensus 235 ~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i 314 (499)
+|++||+++|+++|++++|+|.|+++|+..+++++...++.+++.++|.+|+++|++.|++|+|+||++|||||+|+||+
T Consensus 238 ay~~ap~~vsalls~~~~k~g~y~l~R~~~~~f~~~~~~~~~~l~~lg~~t~~~g~~~Al~Q~d~KrllAYSsisq~G~i 317 (495)
T PRK05846 238 AHVEAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFV 317 (495)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 66789953777788999999999889976113530159999999999988899899999998320047899899999999
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCC
Q ss_conf 33310487542210234555421023330356777764200111100235565420233201345555301024443112
Q gi|254780866|r 315 TIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIG 394 (499)
Q Consensus 315 ~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~ 394 (499)
+++++.+++.|..++++|+++|+++|+++|+++|.+++++|++|++|++|+.|++|+++.++.++.+|++|+||++||+|
T Consensus 318 l~g~~~~~~~~~~~a~~~~~~h~~~k~~lF~~~g~i~~~~g~~~i~~l~Gl~~~~P~~~~~~~i~~lsl~GiPp~~GF~~ 397 (495)
T PRK05846 318 TLGIFAGNQLGVQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVG 397 (495)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCCHHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 99998676999999999999999999999999999999649817352378465496889998999999826753051889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 28999999986599999999999999999999999997288987655568788912689999999999999772488999
Q gi|254780866|r 395 EFLVIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRD 474 (499)
Q Consensus 395 k~~i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~ 474 (499)
|+++++++++.++|+.+++.+++.+++.|++|.++++|+|+.+++..++.+|.+++|+.++.++++.++.+|++|+++.|
T Consensus 398 k~~i~~~~~~~~~~~~~~~~~~~~l~~~y~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~Gi~P~~~~~ 477 (495)
T PRK05846 398 EFLILLGSFQVNPWIAFIATTGLILAAVYSLWLYKRVMFGPVAKEEEAELKDLNGRELLILLPLVALLILLGVYPKPLLD 477 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999987499999999999999999999999998189895224477899987999999999999999970799999
Q ss_pred HHHHHHHHHHHHCC
Q ss_conf 99999999985202
Q gi|254780866|r 475 TFSVPLSSIIENYT 488 (499)
Q Consensus 475 ~~~~~~~~l~~~~~ 488 (499)
.+++++++++++.+
T Consensus 478 ~i~~a~~~ll~~~~ 491 (495)
T PRK05846 478 VIHPSVENLLQWIA 491 (495)
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999999735
No 3
>PRK02546 NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Probab=100.00 E-value=0 Score=716.32 Aligned_cols=484 Identities=34% Similarity=0.651 Sum_probs=436.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCEEEEEEEEECCC-CCEEEEE
Q ss_conf 8307899999999999999872035530357999999999999999999998-6308888189998631348-5405466
Q gi|254780866|r 2 NLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWS-VFDKGRSSFQMIEYYHWID-YFCSYHL 79 (499)
Q Consensus 2 ~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~l 79 (499)
|+|||++++++|+++++++.+.+..+++ |..+.++...+...+..+...+. .++.+..+.|..+.+.|++ .++++++
T Consensus 8 ~~PwLsllI~lPLlgalli~~l~~~~~~-~~~~~~al~~~l~~~~l~l~~~~~~~~~~~~~~q~~~~~~Wip~lgi~~~l 86 (531)
T PRK02546 8 NFPWLTTIILFPIVAALLIPFIPDKGDG-KTVRWYALIVGLIDFLITVAAFYTGYDPSNPGLQLVESYSWLPQLGLTWSV 86 (531)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEE
T ss_conf 4699999999999999999997603631-889999999999999999999999828888874899985304766717998
Q ss_pred EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 52258899999999999999975201121002356789998630243026540433111234310343123553123433
Q gi|254780866|r 80 GVDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSE 159 (499)
Q Consensus 80 ~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~ 159 (499)
++|++|..++.++++++.++.+++++. +++.++|+.+++++.+++++++.|+|++++|++||++++|+|.||++|++++
T Consensus 87 gvDglSl~lvlLt~~l~~l~~l~s~~~-~~~~~~f~~l~L~~~~~m~gvf~a~Dl~~fyvf~E~~~i~sy~LIg~~g~~~ 165 (531)
T PRK02546 87 GADGLSMPLILLTGFITTLAVLAAWPV-TFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKK 165 (531)
T ss_pred EEHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 525668999999999999999740544-6663099999999999999999980799999999999999999999809899
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH--HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 23210001135544556776665544321000100--3443210133037899998541034445540002320101000
Q gi|254780866|r 160 RIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSI--IDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHV 237 (499)
Q Consensus 160 ~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~--~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~ 237 (499)
|.+|+.||++++..|+.+++.|+..+|..+|+.++ .++.. .+.+...+.+.+.++++||++|++++|||.|+||+|+
T Consensus 166 ~~~Aa~k~~l~t~~gs~~lL~~~~~l~~~~g~~~f~~~~l~~-~~~~~~~~~~~~~~~li~f~vK~~~fP~H~WLPdA~~ 244 (531)
T PRK02546 166 RQYAATKFILYTAGSSLFILLAALAMAFYGDTPSFDMTHLAA-KDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHG 244 (531)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC
T ss_conf 999999999999777999999999999984873799999985-4356279999999999999985010345126688877
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHH
Q ss_conf 22223443333232233321110000111223310000000001222221221110000244322332100135402333
Q gi|254780866|r 238 QAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIG 317 (499)
Q Consensus 238 ~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~ 317 (499)
+||+++|++++|+++|+|.|+++|+..+++|+...++.+.+.++|++|+++|++.|++|+|+||++|||||+|+||++++
T Consensus 245 ~aPt~~S~llagvl~K~G~Y~liR~~~~l~p~~~~~~~~~l~~lg~itii~gal~Al~Q~DiKrllAYSSIshmG~i~lG 324 (531)
T PRK02546 245 EATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIG 324 (531)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89906788888999987445349987764125788872599999999999999999987338999999999999999999
Q ss_pred HCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHH
Q ss_conf 10487542210234555421023330356777764200111100235565420233201345555301024443112289
Q gi|254780866|r 318 IFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFL 397 (499)
Q Consensus 318 l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~ 397 (499)
++.+++.|.+|+++|++||++.|+++|+++|.+++|+||||++|+||+.|+||+++.++.++.+|++|+||++||+||++
T Consensus 325 i~~~~~~g~~Gai~~~~~H~~~ka~LFl~~G~i~~r~gt~~i~~lgGL~~~mP~~~~~f~i~~la~~GlP~~~GF~sk~l 404 (531)
T PRK02546 325 IGSFSDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELM 404 (531)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 99715999999999999999999999999818999739616787188687755999999999999873420260999999
Q ss_pred HHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999999865-------9999999999999999999999999728898765--5568788912689999999999999772
Q gi|254780866|r 398 VIMSVFQNS-------NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEK--VQQLKDLSLRERCMVYPIAVLTVFFGIY 468 (499)
Q Consensus 398 i~~~~~~~~-------~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~l~~~~i~lGi~ 468 (499)
++.+.++.+ .+...++..+.++++.|++|.++|+|+|+.+++. .++.+|.++||..++..++++++.+|+|
T Consensus 405 il~G~~~~~~~~~~~~~~~~~~a~~g~vl~a~Y~l~~~~rvf~G~~~~~~~~~~~~~dl~~rE~~~~~~l~~~~~~~G~y 484 (531)
T PRK02546 405 VFVGFATDDAYTLPFRVVVVFLAAIGVILTPIYLLSMLREIFFGKENKELVSHENLVDAEPREVYIIACLLVPIIGIGLY 484 (531)
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99722104543106999999999999999999999999999759998543434568788788999999999999999758
Q ss_pred HHHHHHHHHHHHHHHHHHCC
Q ss_conf 48899999999999985202
Q gi|254780866|r 469 PVPIRDTFSVPLSSIIENYT 488 (499)
Q Consensus 469 p~~~~~~~~~~~~~l~~~~~ 488 (499)
|+++.|..++++++++++.+
T Consensus 485 P~~~l~~~~~~v~~l~~~~~ 504 (531)
T PRK02546 485 PKLVTQSYDATINQLVARDR 504 (531)
T ss_pred CHHHHHHHHHHHHHHHHHHH
T ss_conf 89987032889999999766
No 4
>CHL00011 ndhD NADH dehydrogenase subunit 4
Probab=100.00 E-value=0 Score=707.98 Aligned_cols=486 Identities=34% Similarity=0.657 Sum_probs=431.3
Q ss_pred CCC-CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCEEEEEEEEECCCC-CEEE
Q ss_conf 983-0789999999999999987203553035799999999999999999999-863088881899986313485-4054
Q gi|254780866|r 1 MNL-PFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVW-SVFDKGRSSFQMIEYYHWIDY-FCSY 77 (499)
Q Consensus 1 m~~-p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~ 77 (499)
||+ |||++++++|+++++++.+.+..++ |..+..+...+...+..+...+ ..++.+....|..+.+.|.+. .+++
T Consensus 1 M~~~P~L~lli~lPllga~li~~l~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Wi~~~gi~~ 78 (500)
T CHL00011 1 MNYFPWLTIIVVLPIFAGSLIFFLPHRGN--KVIRWYTICICLLELLLTTYAFCYHFQLDDPLIQLVEDYKWINFFDFHW 78 (500)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEE
T ss_conf 99877999999999999999999744231--3999999999999999999999998076888568997344246578068
Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCC
Q ss_conf 66522588999999999999999752011210023567899986302430265404331112343103431235531234
Q gi|254780866|r 78 HLGVDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGG 157 (499)
Q Consensus 78 ~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~ 157 (499)
++++|++|..++.++++++.++.+++++. +++.+.|+.+++++.++++|++.|+|++++|++||++++|+|.||++|++
T Consensus 79 ~lgiDgLs~~lvlLt~~i~~l~~l~s~~~-~~~~~~f~~l~L~~~~~~~G~~~s~dl~~~yvf~E~~~i~sy~LI~~~g~ 157 (500)
T CHL00011 79 RLGIDGLSIGLILLTGFITTLATLAAWPV-TRNSRLFHFLMLAMYSGQIGLFSSQDLLLFFLMWELELIPVYLLLSMWGG 157 (500)
T ss_pred EEEHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 87316878999999999999999840432-46754999999999999999999753999999999999878751110488
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH---HCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 3323210001135544556776665544321---0001003443210133037899998541034445540002320101
Q gi|254780866|r 158 SERIYAAYKFFLYTFFGSIFMLFAIVVMCWE---KKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPN 234 (499)
Q Consensus 158 ~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~---~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~ 234 (499)
++|.+|+.||++++.+|+.+++.|+..++.. ++++|+.++.+. ..+...+.+.+.++++|+++|+|+||||.|+||
T Consensus 158 ~~~~~aa~k~~l~t~~gs~~lL~gi~~l~~~~~~~~t~~~~~l~~~-~~~~~~~~~~~~~~ligf~vK~~~fP~H~WlPd 236 (500)
T CHL00011 158 KKRLYSATKFILYTAGGSIFLLIGVLGMGLYGSNEPTLNFETLANQ-SYPVALEILFYIGFLIAFAVKLPIIPLHTWLPD 236 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 8999999999999988899999999999999854488899999844-563259999999999999985284546011677
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHH
Q ss_conf 00022223443333232233321110000111223310000000001222221221110000244322332100135402
Q gi|254780866|r 235 AHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYV 314 (499)
Q Consensus 235 ~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i 314 (499)
+|++||+++|+++||+++|+|.|+++|+..+++|+....+.+++.++|++|+++|++.|++|+|+||++|||||+|+||+
T Consensus 237 a~~~ap~~~s~llsg~~~k~g~y~l~R~~~~~~~~~~~~~~~~l~~lg~it~i~g~~~Al~Q~d~KrllAYSsis~~G~i 316 (500)
T CHL00011 237 THGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSLFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFI 316 (500)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 77789839999999999998887779850001423789999999999999999999999997017888898417448899
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCC
Q ss_conf 33310487542210234555421023330356777764200111100235565420233201345555301024443112
Q gi|254780866|r 315 TIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIG 394 (499)
Q Consensus 315 ~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~ 394 (499)
+++++.+++.|++|+++|+++|++.|+++|+++|.+++|+|++|++|+||+.|+||+++.++.++.+|++|+||++||+|
T Consensus 317 ~lg~~~~~~~g~~ga~~~~~~H~~~k~~LFl~~g~i~~~~gt~~i~~lgGl~~~~P~~a~~~~i~~la~~G~P~~~GF~~ 396 (500)
T CHL00011 317 IIGIGSITDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLLYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVA 396 (500)
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHCCCCHHHHCHHHHHHHHHHHHHHCCCCCCCCHHH
T ss_conf 99998706889999899999999999999999999998158775140378076664999999999999816875253889
Q ss_pred HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 289999999865999-------999999999999999999999972889876-555687889126899999999999997
Q gi|254780866|r 395 EFLVIMSVFQNSNTV-------AVLASFGVVLSALYSLWLYRKVVFGVSKCE-KVQQLKDLSLRERCMVYPIAVLTVFFG 466 (499)
Q Consensus 395 k~~i~~~~~~~~~~~-------~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~l~~~~i~lG 466 (499)
|++++.++++++.|. ..++.++.++++.|++|.++++|+|+++++ +.+..+|.+++|..+..++.+.++.+|
T Consensus 397 k~~i~~g~~~~~~~~~~~~~~~~~i~~~g~il~a~Y~l~~~~~~f~g~~~~~~~~~~~~d~~~~e~~~~~~l~~~~i~~G 476 (500)
T CHL00011 397 ELIVFFGIITSQKYLLMFKILITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNSYFFDSGPRELFISICLLLPVIGIG 476 (500)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999971643257899999999999999999999999999779988766533566898889999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 724889999999999998520200
Q gi|254780866|r 467 IYPVPIRDTFSVPLSSIIENYTLK 490 (499)
Q Consensus 467 i~p~~~~~~~~~~~~~l~~~~~~~ 490 (499)
+||++++|..+++++++++|+.++
T Consensus 477 l~P~~~l~~~~~~v~~ll~~~~~~ 500 (500)
T CHL00011 477 IYPDFVLSLSVDKVEAILSNYFYR 500 (500)
T ss_pred HCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 375999998999999998753259
No 5
>COG1008 NuoM NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]
Probab=100.00 E-value=0 Score=705.03 Aligned_cols=486 Identities=51% Similarity=0.942 Sum_probs=465.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC-CCEEEEE
Q ss_conf 983078999999999999998720355303579999999999999999999986308888189998631348-5405466
Q gi|254780866|r 1 MNLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWID-YFCSYHL 79 (499)
Q Consensus 1 m~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 79 (499)
.|.|+++.++++|+++++++.+.+. +.+..+.++...+...++.++..+..++.+++++|+.|...|++ .++++++
T Consensus 1 ~~~p~Ls~li~lPli~alli~~~~~---~~~~~r~~al~~~~~~~~l~l~~~~~Fd~s~~~~qf~e~~~Wi~~lGl~y~v 77 (497)
T COG1008 1 LSFPLLSLLIFLPLIGALLILLIPD---NGKFARWIALVVSLATLLLSLYLFAGFDISSPGFQFVESYPWIPQLGLSYHL 77 (497)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHCCCEEEE
T ss_conf 9863899999999999999976177---8725799999999999999999999667899973799975125644926999
Q ss_pred EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 52258899999999999999975201121002356789998630243026540433111234310343123553123433
Q gi|254780866|r 80 GVDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSE 159 (499)
Q Consensus 80 ~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~ 159 (499)
++||+|.+++++++++..++.+.+++..+||.++|+.+++.+.++++|++.|.|++.+|+|||.+.+|.|++|+.||+++
T Consensus 78 gvDGiS~~lvlLt~~l~~lail~sw~~i~~r~~~f~~~~L~le~~~iGvF~a~DllLFyvFwE~~LIPmy~iIgiwGg~~ 157 (497)
T COG1008 78 GVDGISLLLVLLTALLTLLAILASWREIEKRPKLFYALFLLLEGGVIGVFAALDLLLFYVFWELMLIPMYFLIGIWGGKR 157 (497)
T ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 65078799999999999999999626666608899999999999999999998899999999999999999754206875
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2321000113554455677666554432100--01003443210133037899998541034445540002320101000
Q gi|254780866|r 160 RIYAAYKFFLYTFFGSIFMLFAIVVMCWEKK--TSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHV 237 (499)
Q Consensus 160 ~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~g--s~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~ 237 (499)
|.+|+.|+++|+..||.++|.+....|+.+| |+|+.++.+.. .+...|.+.+..+++||++|++++|+|+||||+|.
T Consensus 158 R~yAa~KFflYT~~gsl~mLla~~~~~~~~g~~TFd~~~l~~~~-~~~~~q~~L~~~f~iaFaVK~P~~P~HTWLPDAh~ 236 (497)
T COG1008 158 RIYAATKFFLYTLLGSLFMLLAFLYLYFLTGSPTFDILELLALN-LPLGVQTLLFLGFLIAFAVKMPLFPLHTWLPDAHV 236 (497)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHC
T ss_conf 14889999999999899999999999985699721079998446-77579999999999999840687653056872420
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHH
Q ss_conf 22223443333232233321110000111223310000000001222221221110000244322332100135402333
Q gi|254780866|r 238 QAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIG 317 (499)
Q Consensus 238 ~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~ 317 (499)
|||++.|.+++|+..|+|.|+++|+..+++|+.+.+..+.+..+|+++++||++.|+.|||+||++||||+||||++.+|
T Consensus 237 eApt~gSViLaGiLlKmG~YGllRf~L~lfP~as~~fap~l~~L~visIiY~al~A~~Q~diKrliAYSSiSHMGfV~lg 316 (497)
T COG1008 237 EAPTAGSVILAGILLKMGGYGLLRFSLPLFPDASAYFAPLLVALGVISIIYGALVAFAQTDIKRLIAYSSISHMGFVTLG 316 (497)
T ss_pred CCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 38970789999999972226726623003876378999999999999999999999999868999999826687899999
Q ss_pred HCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHH
Q ss_conf 10487542210234555421023330356777764200111100235565420233201345555301024443112289
Q gi|254780866|r 318 IFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFL 397 (499)
Q Consensus 318 l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~ 397 (499)
+...++.|.+|+++|+++|++..+++|+++|.+|+|+||||++++||+.|+||..+..++++.++..|+|+++||+||++
T Consensus 317 ifs~~~~g~~GAv~QM~sHGlisa~LFl~vG~iy~r~hTr~i~~~GGl~~~mP~~aa~~~~~~mAs~glPG~sgFvgEFl 396 (497)
T COG1008 317 IFSFNELGVSGAVFQMLSHGLISAALFLLVGVLYERTHTRDIADLGGLANKMPKLAALFMLFAMASLGLPGTSGFVGEFL 396 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 99815888879999999813899999999999998624246887477876475999999999999668986301999899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999986599999999999999999999999997288987655568788912689999999999999772488999999
Q gi|254780866|r 398 VIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRDTFS 477 (499)
Q Consensus 398 i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~~~~ 477 (499)
++.+.++..+|...++.++.++++.|.++.++|+++|+.+++...+.+|.+.+|..+...++++++.+|++|+++++..+
T Consensus 397 il~G~f~~~~~~~~la~~g~iltA~Y~L~~~~rv~fG~~~~~~~~~~~dl~~rE~~~~~~L~~~ii~lGvyP~~~~~~~~ 476 (497)
T COG1008 397 ILLGSFQVFPWVAFLAAFGLILTAVYMLWMYQRVFFGPLKEGSLAELPDLNGREVFILAPLVVLILFLGVYPNPILDIIQ 476 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 99523156299999999999999999999999997487774313424574386999999999999998178689998879
Q ss_pred HHHHHHHHHCCCH
Q ss_conf 9999998520200
Q gi|254780866|r 478 VPLSSIIENYTLK 490 (499)
Q Consensus 478 ~~~~~l~~~~~~~ 490 (499)
+.++++.++....
T Consensus 477 ~~~~~l~~~~~~~ 489 (497)
T COG1008 477 PAVVNLLSQVAQS 489 (497)
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999987540
No 6
>PRK06473 NAD(P)H-quinone oxidoreductase subunit D4; Validated
Probab=100.00 E-value=0 Score=703.15 Aligned_cols=489 Identities=37% Similarity=0.615 Sum_probs=443.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCC-CEEEEEEEEH
Q ss_conf 789999999999999987203553035799999999999999999999863088881899986313485-4054665225
Q gi|254780866|r 5 FLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDY-FCSYHLGVDG 83 (499)
Q Consensus 5 ~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~iD~ 83 (499)
.|++++++|+++++++.+.+... ++|..+.++...+...+..+......++.++...++.+...|.+. ++++.+++|+
T Consensus 1 mLsllI~lPLlgAll~~~l~~~~-~~~~~~~i~l~~~~~~~~~sl~l~~~~~~~~~~~~~~~~~~Wi~~~gi~~~l~vDg 79 (500)
T PRK06473 1 MLSALIWVPLLGAILIGFLPSGL-NGKLSRSVALVIASVLLLLSLVLAFQFDPGNPNQQFTEFIPWIDSLGLSYHLGVDG 79 (500)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEHHH
T ss_conf 98999999999999999975235-45999999999999999999999999918998669998742567678067753588
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCC
Q ss_conf 88999999999999999752011210023567899986302430265404331112343103431235531234332321
Q gi|254780866|r 84 ISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYA 163 (499)
Q Consensus 84 ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~a 163 (499)
+|..++.+++++..+...+++ +.++|+++|+.+++++.+++++++.|+|++++|++||++++++|.|+++|++++|.+|
T Consensus 80 ls~~ll~lt~~l~~i~i~~~~-~~~~~~~~f~~l~ll~~~~~~g~~~s~dl~~~fvf~E~~~i~sy~LI~~~g~~~~~~a 158 (500)
T PRK06473 80 LSLPLLVLNSLLTLIAIYSSD-ESLERPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYA 158 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHCC-CCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 899999999999999999636-6556412999999999999999999752999999999999999999994387888999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH-HHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 000113554455677666554432100010034432-1013303789999854103444554000232010100022223
Q gi|254780866|r 164 AYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYA-MSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTA 242 (499)
Q Consensus 164 a~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~-~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~ 242 (499)
+.||++++.+|+.+++.|+..+|..+|+.|++.... ..+.+...+.+.+.++++|+++|+|++|||+|+||+|+|||+|
T Consensus 159 a~ky~i~~~~gs~~~L~gi~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~gf~~K~~~~P~H~WLPdA~~~aPt~ 238 (500)
T PRK06473 159 ATKFLLYTAISGILVLVSFLGLVWLSGASSFDYEPLLSHTLPLATQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTP 238 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHCCCCC
T ss_conf 99899999752689999999999993865088999987267524899999999999998621312150314142008985
Q ss_pred CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 44333323223332111000011122331000000000122222122111000024432233210013540233310487
Q gi|254780866|r 243 GSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGM 322 (499)
Q Consensus 243 ~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~ 322 (499)
+|+++||+++|+|.|+++|+..+++++...++..++.++|++|+++|++.|++|+|+||++|||||+|+||++++++.++
T Consensus 239 vSallsg~l~K~G~y~liR~~~~~~~~~~~~~~~~l~~lg~~t~i~g~~~Al~Q~DlKrllAYSSis~mG~i~lgi~~~~ 318 (500)
T PRK06473 239 VSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAT 318 (500)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 04778899998889987986664124579999999999999999899999999803627889856999999999999676
Q ss_pred CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHH---HHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHH
Q ss_conf 5422102345554210233303567777642001111002355---6542023320134555530102444311228999
Q gi|254780866|r 323 KSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGL---VHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVI 399 (499)
Q Consensus 323 ~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl---~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~ 399 (499)
+.|+.|+++|++||+++|+++|+++|.+++|+||||++++||+ .|+||+++.++.++.+|++|+||++||+||++++
T Consensus 319 ~~g~~ga~~~~i~H~~~k~~LFl~~G~i~~~~gt~~i~~lgGL~~~~~~mP~~~~~f~i~~la~~G~Pp~~GF~~k~li~ 398 (500)
T PRK06473 319 PLSILAAVAQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLVF 398 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 56799999999999999999999999999862881399858945332208399999999999871774304099999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998659999999999999999999999999728898765556878891268999999999999977248899999999
Q gi|254780866|r 400 MSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRDTFSVP 479 (499)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~~~~~~ 479 (499)
+++++.+++...++.+++.+++.|++|.++++|+|+.++ +.++.+|.+++|+.++.+++++++.+|++|+++.+.++++
T Consensus 399 ~g~~~~~~~~~~~~~~~~~lta~Y~l~~~~~~f~G~~~~-~~~~~~~~~~~~~~~~~~L~~~~i~~Gi~P~~~l~~~~~a 477 (500)
T PRK06473 399 RGSFPIFPVQTLLCMIGTGLTAVYFLLLINRVFFGRLTA-ELSNLPRVLWSERLPALVLAVLIVILGIQPSWLVRWSEPT 477 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999998599999999999999999999999998089970-0256899738699999999999999997689999999999
Q ss_pred HHHHHHHCCCHHHHHCC
Q ss_conf 99998520200222013
Q gi|254780866|r 480 LSSIIENYTLKTGYSDS 496 (499)
Q Consensus 480 ~~~l~~~~~~~~~~~~~ 496 (499)
++.+++++.+.++...+
T Consensus 478 a~~ll~~~~y~~~v~~~ 494 (500)
T PRK06473 478 ASALLTGQSTVAAVSLN 494 (500)
T ss_pred HHHHHCCHHHHHHHHCC
T ss_conf 99995976789888074
No 7
>PRK07691 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=699.44 Aligned_cols=487 Identities=22% Similarity=0.373 Sum_probs=432.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEE
Q ss_conf 98307899999999999999872035530357999999999999999999998630888818999863134854054665
Q gi|254780866|r 1 MNLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLG 80 (499)
Q Consensus 1 m~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (499)
||. ++.+.+++|++++++..+.+. +++..+.++.......++.++.......+++ .+..+..+|.++. ++.+.
T Consensus 3 m~~-ll~l~i~iPl~~a~~~~~l~~---~~~~~r~i~~~~~~~~l~~~~~l~~~~~~~g--~~~~~~~~w~~~~-gi~~~ 75 (498)
T PRK07691 3 MNN-LVILPLLIPVITAILLVFLGK---RPIIQRYVALIGSLLTLVAAIILLANVYKHG--IITVELGSWKAPF-GIVFV 75 (498)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCCC-CEEEE
T ss_conf 779-999999999999999999707---6138999999999999999999999982698--1799852567774-60555
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 2258899999999999999975201121--00235678999863024302654043311123431034312355312343
Q gi|254780866|r 81 VDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS 158 (499)
Q Consensus 81 iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~ 158 (499)
+|++|..+..++++++.++.+|++++++ +++++|+.+++++..++++++.|+|++++|++||++++++|.|+.+|+++
T Consensus 76 ~D~ls~~~~ll~~~v~~l~~lys~~~~~~~~~~~~f~~l~ll~~~g~~g~~~s~dl~~lfvf~Ei~~i~sy~Li~~~~~~ 155 (498)
T PRK07691 76 ADIFAALLVLTSIIITAIVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLLVIGGTK 155 (498)
T ss_pred ECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 40766899999999999999999898256733218999999999999999999899999999999999999999984977
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH----CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 3232100011355445567766655443210001003443210----133037899998541034445540002320101
Q gi|254780866|r 159 ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMS----KFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPN 234 (499)
Q Consensus 159 ~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~----~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~ 234 (499)
++.+++.||++++.+|+.++++|+..+|..+||+|+.++.... ..+.......+.++++|+++|++++|||.|+||
T Consensus 156 ~~~~aa~ky~i~~~~gs~~~L~gi~~ly~~tGtl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~K~a~~PfH~WlPd 235 (498)
T PRK07691 156 IQLRETIKYVLINVVSSSFFVVGVAILYSVVGTLNMADISVKIAELGAHQTGLINVVAILFLFVFALKAGLFPLYFWLPG 235 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC
T ss_conf 99999999999999999999999999999977876999999997535554279999999999999998562546011544
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHH
Q ss_conf 00022223443333232233321110000111223310000000001222221221110000244322332100135402
Q gi|254780866|r 235 AHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYV 314 (499)
Q Consensus 235 ~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i 314 (499)
+|+++|+++++++|++++|+|+|+++|+..+.+++....+.+.+.++|++|+++|++.|++|+|+||++|||||+|+||+
T Consensus 236 ay~~ap~~~s~lls~~~~k~g~y~l~R~~~~~~~~~~~~~~~~l~~l~~~t~~~g~~~Al~Q~d~KrlLAYSsisq~G~i 315 (498)
T PRK07691 236 SYYAPPAAIIALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILFLALLTIIFGVIGAVAYADIKKIIIYNIMIAVGVI 315 (498)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 45689947999999999999999999999985533389999999999999999999999987039999999999999999
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCC
Q ss_conf 33310487542210234555421023330356777764200111100235565420233201345555301024443112
Q gi|254780866|r 315 TIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIG 394 (499)
Q Consensus 315 ~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~ 394 (499)
+++++.+++.++.++++|+++|+++|+++|+++|.+++++|++|++|+||+.|++|+++.++.++.+|++|+||++||+|
T Consensus 316 ~~gi~~~~~~~~~gal~~l~~h~~~k~~lFl~~g~i~~~~g~~~i~~lgGL~~~~P~~a~~f~i~~lsl~GlPp~~GF~s 395 (498)
T PRK07691 316 LVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYG 395 (498)
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 99999752999999999999999999999999999999739865999819898849999999999999752852041889
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 289999999865999-9999999999999999999999728898765556878891268999999999999977248899
Q gi|254780866|r 395 EFLVIMSVFQNSNTV-AVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIR 473 (499)
Q Consensus 395 k~~i~~~~~~~~~~~-~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~ 473 (499)
|+++++++++.++++ ..++.+++.+++.|++|.++++|+|+++++. ++.++.++.|..|+.+++++++.+|++|+|+.
T Consensus 396 K~~i~~~a~~~~~~~~~~~~~~~s~~~~~y~~r~~~~~f~g~~~~~~-~~~~~~~~~~~~p~~~l~~~~i~~Gi~p~~~~ 474 (498)
T PRK07691 396 KFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKIFLQGFWGEPKGYD-LNNKVPVKKLLTPAIVLVVITILYGLGAEYLY 474 (498)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999984719999999999999999999999998328998755-56678835689999999999999996589999
Q ss_pred HHHHHHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 99999999998520200222013679
Q gi|254780866|r 474 DTFSVPLSSIIENYTLKTGYSDSVKG 499 (499)
Q Consensus 474 ~~~~~~~~~l~~~~~~~~~~~~~~~g 499 (499)
+..++++++++| +..|+++|.|
T Consensus 475 ~~~~~aa~~lld----~~~yv~avl~ 496 (498)
T PRK07691 475 PYVKQAAETLYN----PSTYIEAVLK 496 (498)
T ss_pred HHHHHHHHHHCC----HHHHHHHHCC
T ss_conf 999999998629----1779987138
No 8
>PRK07363 NAD(P)H-quinone oxidoreductase subunit M; Validated
Probab=100.00 E-value=0 Score=693.66 Aligned_cols=484 Identities=32% Similarity=0.573 Sum_probs=440.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCC-CEEEEEEEEH
Q ss_conf 789999999999999987203553035799999999999999999999863088881899986313485-4054665225
Q gi|254780866|r 5 FLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDY-FCSYHLGVDG 83 (499)
Q Consensus 5 ~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~iD~ 83 (499)
.|++++++|++++++..+.+... ++++.+.++...+...+..+...+..++.+....+..+...|.+. .+++++++|+
T Consensus 1 mLslli~lPllgAli~~l~~~~~-~~~~~~~ia~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~W~~~~gi~~~l~vD~ 79 (499)
T PRK07363 1 MLSVLLWLPILGAIIIGFFPGNL-SSARLRQIALVFAVIVLAWSLFLLTQFDLSDPGMQFQEYLPWIEPLGLSYSLGVDG 79 (499)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEEHH
T ss_conf 98999999999999999976863-27899999999999999999999999656799659998750235568578884038
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCC
Q ss_conf 88999999999999999752011210023567899986302430265404331112343103431235531234332321
Q gi|254780866|r 84 ISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYA 163 (499)
Q Consensus 84 ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~a 163 (499)
+|..++.+++++.... +|+.++.+||+++|+.+++++.+++++++.|+|++++|++||++++++|.|+++|++++|.+|
T Consensus 80 ls~~~l~lt~~~~~i~-i~s~~~~~~~~~~f~~l~ll~~~~~~g~~~s~dl~~~fvf~E~~~i~sy~LI~~~g~~~~~~A 158 (499)
T PRK07363 80 LSLPLIVLNSLLTWIA-IYSIGENVERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRGYA 158 (499)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 7899999999999999-986311257665999999999999999999816999999999999999998836898689999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH-HHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 000113554455677666554432100010034432-1013303789999854103444554000232010100022223
Q gi|254780866|r 164 AYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYA-MSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTA 242 (499)
Q Consensus 164 a~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~-~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~ 242 (499)
+.||++++.+|+.+++.|+..+|..+|+.|++.... ..+.+...+...+.++++|+++|+|++|||.|+||+|+++|++
T Consensus 159 a~ky~i~~~~g~~~~L~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~l~gf~vK~~~~P~H~WLPdA~~~ap~~ 238 (499)
T PRK07363 159 SIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAVSTQNLSLNTQLILLTLLLLGFGIKIPLVPLHTWLPDAYTEASPA 238 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
T ss_conf 99999999888999999999999996761678999997316423899999999999998626164430440341459986
Q ss_pred CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 44333323223332111000011122331000000000122222122111000024432233210013540233310487
Q gi|254780866|r 243 GSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGM 322 (499)
Q Consensus 243 ~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~ 322 (499)
+|++++++++|+|.|+++|+..+++++....+...+.++|.+|+++|++.|++|+|+||++|||||+|+||++++++.++
T Consensus 239 ~s~llsg~~~K~G~y~liR~~~~l~~~~~~~~~~~l~~lg~it~~~ga~~Al~Q~d~KrllAYSSisqmG~i~lgi~~~~ 318 (499)
T PRK07363 239 VAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGT 318 (499)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 11565899999999999998774045589999999999999989889999999831779999989999999999999667
Q ss_pred CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHH---HHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHH
Q ss_conf 54221023455542102333035677776420011110023556---542023320134555530102444311228999
Q gi|254780866|r 323 KSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLV---HNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVI 399 (499)
Q Consensus 323 ~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~---~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~ 399 (499)
+.|+.|+++|++||++.|+++|+++|.+++|+||||++|+||+. |+||+++.++.++.+|++|+||++||+||++++
T Consensus 319 ~~g~~gal~~~~~H~l~ka~LFl~~G~i~~~~gt~~i~~lgGL~~~~k~mP~~~~~f~i~~la~~GlPp~~GF~sk~~i~ 398 (499)
T PRK07363 319 ELSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLILAGMASAGIPGLVGFVAEFIVF 398 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
T ss_conf 47788999999999999999999999999981972399861856543238399999999999974888635188999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998659999999999999999999999999728898765556878891268999999999999977248899999999
Q gi|254780866|r 400 MSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRDTFSVP 479 (499)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~~~~~~ 479 (499)
+++++.+++...++.+++.+++.|++|.++++++|+.+++. ++.+|.+++|..++.++++.++.+|+||+++.+..+++
T Consensus 399 ~g~~~~~~~~~~~~~~~~~lta~Y~l~~~~~~~fg~~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~Gi~P~~~l~~~~~~ 477 (499)
T PRK07363 399 QGSFSAFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNQL-AYYPKVLWSEKIPALILTAIILFLGVQPNWLVRWSEPT 477 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_conf 99999859999999999999999999999999818998644-45788737579999999999999996749899888999
Q ss_pred HHHHHHHCCCHH
Q ss_conf 999985202002
Q gi|254780866|r 480 LSSIIENYTLKT 491 (499)
Q Consensus 480 ~~~l~~~~~~~~ 491 (499)
+++++++...+.
T Consensus 478 ~~~lv~~~~~~~ 489 (499)
T PRK07363 478 TTSMVAAIPPVE 489 (499)
T ss_pred HHHHHHHCCHHH
T ss_conf 999998430688
No 9
>PRK12663 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=694.04 Aligned_cols=487 Identities=22% Similarity=0.393 Sum_probs=432.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEE
Q ss_conf 98307899999999999999872035530357999999999999999999998630888818999863134854054665
Q gi|254780866|r 1 MNLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLG 80 (499)
Q Consensus 1 m~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (499)
||. ++.+++++|+++++++.+.+. ++|..+.++...+...++.++........++ .+..+..+|.++. ++.+.
T Consensus 1 M~~-Ll~l~illPl~~a~v~~~l~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g--~~~~~~~~w~~~~-gi~~~ 73 (497)
T PRK12663 1 MSN-LLILPMLLPLLCALILVFLRN---NDRLQRYLALGTMTALTIISLALLIYVQRHG--PITLDFGGWLAPF-GIQFT 73 (497)
T ss_pred CCH-HHHHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCCC-CCEEE
T ss_conf 964-999999999999999999568---4517999999999999999999999981699--4799842467776-70778
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHCCCCCCH--HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 225889999999999999997520112100--235678999863024302654043311123431034312355312343
Q gi|254780866|r 81 VDGISILLVVLTTFLTPFCILSSWKSIQEN--FREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS 158 (499)
Q Consensus 81 iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~--~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~ 158 (499)
+|++|..+..++++++.++..|++++.+++ +++|+.+++++.+++++++.|+|++++|++||++++++|.|+.+|+++
T Consensus 74 vD~ls~~~~ll~~~v~~~~~~ys~~~~~~~~~~~~f~~l~ll~~~g~~g~~~a~dl~~~fvf~E~~~i~sy~Li~~~~~~ 153 (497)
T PRK12663 74 GDSLSALMVTTASFVATAIMAYSFADIEKSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLLASFVLITLGQSR 153 (497)
T ss_pred ECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 64655999999999999999999898607821649999999999999999998379999999999999999999968988
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC--HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3232100011355445567766655443210001003443210133--03789999854103444554000232010100
Q gi|254780866|r 159 ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFP--FSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAH 236 (499)
Q Consensus 159 ~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~--~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y 236 (499)
++.||++||++++.+|+.++++|+.++|..+||+|++++....+.. .........++++|+++|++++||| |+||+|
T Consensus 154 ~~~~Aa~ky~i~~~~gs~~~L~gi~~ly~~tGt~~~~~i~~~~~~~~~~~~~~~~~~l~l~gf~~K~~~~Pfh-WLPday 232 (497)
T PRK12663 154 EQLRGAIKYVVLNLIGSWLFLLGIGLLYKVFGTLNMAHIAMRLNEMGDNATLTTIALLFLLAFSMKAALFPFM-WLPAAY 232 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCC
T ss_conf 9999999999999999999999999999984897699999998744663799999999999999986630102-288875
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHH
Q ss_conf 02222344333323223332111000011122331000000000122222122111000024432233210013540233
Q gi|254780866|r 237 VQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTI 316 (499)
Q Consensus 237 ~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~ 316 (499)
+++|+++|++++++++|+|.|+++|+..++++.....+..++.++|++|+++|++.|++|+|+||++|||||+|+||+++
T Consensus 233 ~~ap~~vsallsgv~~k~g~y~liR~~~~~~~~~~~~~~~~l~~l~~~t~i~g~~~Al~Q~d~KrlLAYSSIsq~G~il~ 312 (497)
T PRK12663 233 HTPNTEVAALFAALLTKVGIYALIRFFTLLFDQERELLHPLIATMAAITMVIGAIGALAYKDIRRIAGYQVISSIGFILL 312 (497)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHH
T ss_conf 68993186999999999999999999887503249999999999999899999999998705776771123103789999
Q ss_pred HHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHH
Q ss_conf 31048754221023455542102333035677776420011110023556542023320134555530102444311228
Q gi|254780866|r 317 GIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEF 396 (499)
Q Consensus 317 ~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~ 396 (499)
+++.+++.++.++++|+++|+++|+++|+++|.+++++|++|++|++|+.|++|+++.++.++.+|++|+||++||+||+
T Consensus 313 gi~~~~~~~~~ga~~~~~~h~~~k~~LFl~~g~i~~~~gt~~i~~l~GL~~~~P~~a~~~~i~~lsl~GlPp~~GF~sK~ 392 (497)
T PRK12663 313 GLGLGTPAGINGAIFYLVHDIVVKTLLFLIAGSLVYLTGYRQLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKV 392 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 99972377999999999999999999999999999971881089867768774999999999999985287525188899
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999986599-9999999999999999999999972889876555687889126899999999999997724889999
Q gi|254780866|r 397 LVIMSVFQNSNT-VAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRDT 475 (499)
Q Consensus 397 ~i~~~~~~~~~~-~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~~ 475 (499)
++++++++.+.| ...+..+++.+++.|++|.++++|+|++++++..+.+|.+.+|..++.++++.++.+|++|+++.+.
T Consensus 393 ~i~~~~~~~~~~~~~~~~~~~~~~~~~y~~r~~~~~f~g~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~Gl~P~~~~~~ 472 (497)
T PRK12663 393 LLVQGALDNGAYILLALMLITSLITMYSLFRIFFLAYWGDKPDGEEVNFKKIPLYRKRILSILVVVVIAMGIAAEPLLNL 472 (497)
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998186999999999999999999999999950899974445767798769999999999999999539999999
Q ss_pred HHHHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 999999998520200222013679
Q gi|254780866|r 476 FSVPLSSIIENYTLKTGYSDSVKG 499 (499)
Q Consensus 476 ~~~~~~~l~~~~~~~~~~~~~~~g 499 (499)
.+++++.++| +++|+++|.+
T Consensus 473 ~~~aa~~L~d----~~~Y~~~v~~ 492 (497)
T PRK12663 473 TQDAAELLAN----PQLYIKAVNP 492 (497)
T ss_pred HHHHHHHHHC----HHHHHHHCCC
T ss_conf 9999998739----3869877189
No 10
>MTH00204 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=695.08 Aligned_cols=472 Identities=45% Similarity=0.815 Sum_probs=440.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC-CCEEEE-----
Q ss_conf 78999999999999998720355303579999999999999999999986308888189998631348-540546-----
Q gi|254780866|r 5 FLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWID-YFCSYH----- 78 (499)
Q Consensus 5 ~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----- 78 (499)
-|++++++|+++++++.+.++. +++..+.+++..+.+++..++..+..++.+ .+.|+.+...|++ ...+++
T Consensus 2 ~Lslii~~Pl~~a~~~~~~~~~--~~~~~r~ial~~sl~~l~lsl~l~~~fd~~-~~~q~~~~~~Wi~~~~~~~~~~~~~ 78 (486)
T MTH00204 2 GLSLIFLLLFMGIINVMGVPRE--NSVKLKKRALEWSLAILFSTLVLWGAFDGE-GQFQFINLVEWIISPALNLQWGPIV 78 (486)
T ss_pred CHHHHHHHHHHHHHHHHHCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCEEEEEEECCCCCCCCCEEECCHH
T ss_conf 5399999999999999977886--178999999999999999999999981888-8548999763234678542313311
Q ss_pred EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCC-
Q ss_conf 6522588999999999999999752011210023567899986302430265404331112343103431235531234-
Q gi|254780866|r 79 LGVDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGG- 157 (499)
Q Consensus 79 l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~- 157 (499)
+++|++|..++.++++++.++.++++++.+++.++|+.+++++..+++|++.|+|++++|++||++++|+|.||+.|++
T Consensus 79 lgvDglsl~l~lLt~~l~~i~~l~s~~~~~~~~~~f~~~ll~l~~~~lg~f~s~dl~~fyvf~E~~lip~y~LIg~wG~~ 158 (486)
T MTH00204 79 FAVDGVSLFFLLLTTLLIPICILISWKSIKFLFKEFLLCLLFLEVLLIGVFLVLDLLLFYILFEGILIPMFLLIGVWGSR 158 (486)
T ss_pred EEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 20463769999999999999999874740242889999999999999999998179999999999999999998882997
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 33232100011355445567766655443210001003443210133037899998541034445540002320101000
Q gi|254780866|r 158 SERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHV 237 (499)
Q Consensus 158 ~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~ 237 (499)
+||.+|+.||++++.+||.+++.|+..+|..+||+|++++.+. +.+...+.+.+..+++||++|++++|||.|+||+|+
T Consensus 159 ~~r~~Aa~k~~lyt~~gs~~~L~gi~~ly~~~gs~~~~~l~~~-~~~~~~~~~~~~~~~l~f~vK~~~~P~H~WLPda~~ 237 (486)
T MTH00204 159 EEKVRASYYFFFYTFAGSVFMLLGIFQLYQITGTTDYQILLNI-KLPLSTQKWALVGFFLSLAVKIPQIPFHIWLPQAHV 237 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 8999999999999999899999999999998284379999972-033147999999999999998625146376255378
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHH
Q ss_conf 22223443333232233321110000111223310000000001222221221110000244322332100135402333
Q gi|254780866|r 238 QAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIG 317 (499)
Q Consensus 238 ~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~ 317 (499)
|||+++|++++|+++|+|.|+++|+..+++|+....+.+.+.++|.+|+++|++.|++|+|+||++|||||+|+||++++
T Consensus 238 ~APt~~S~llag~l~K~g~ygllR~~~~~~p~~~~~~~~~i~~l~~is~i~g~l~Al~Q~dlKrllAYSSIshmG~i~lg 317 (486)
T MTH00204 238 EAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPVIVMLSVIAVIYGSLMTCRQVDFKRLIAYSSVAHMGLVPLG 317 (486)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89922778888999998788679888774431068888999998999999999999998888999999669999999999
Q ss_pred HCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHH
Q ss_conf 10487542210234555421023330356777764200111100235565420233201345555301024443112289
Q gi|254780866|r 318 IFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFL 397 (499)
Q Consensus 318 l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~ 397 (499)
++.++..|+.|+++|+++|++.|+++|+++|.+++|+||||++++||+.|++|.++.++.++.+|++|+||++||+||++
T Consensus 318 l~~~~~~g~~ga~~~mi~Hg~~~~~LF~~~g~i~~~~~t~~i~~~gGL~~~~P~~a~~~~i~~la~~GlP~~~gF~ge~~ 397 (486)
T MTH00204 318 LFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGVTLTMPLFVIIMLVLSLANMGIPLSCNFVGEFF 397 (486)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 99667478999999999999999999999999986048587999689344487999999999999818976475889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999986599999999999999999999999997288987655568788912689999999999999772488999999
Q gi|254780866|r 398 VIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRDTFS 477 (499)
Q Consensus 398 i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~~~~ 477 (499)
++.++++.+++..+++.++.++++.|++|.++++++|+++++ .++.+|.+++|..++.+++++++.+|++|++++|..+
T Consensus 398 i~~g~~~~~~~~~~~~~~~~vlsa~Y~l~~~~~~~~g~~~~~-~~~~~d~~~~e~~~~~~L~~~~i~~Gi~P~~il~~i~ 476 (486)
T MTH00204 398 SLLAAFEYNYGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNY-LLFNRDLNRRELLAILPLLIAIFLGGIVPFPIIDLVK 476 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 999999985999999999999999999999999875999854-4467999987999999999999999973198998887
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780866|r 478 VPLS 481 (499)
Q Consensus 478 ~~~~ 481 (499)
.++.
T Consensus 477 ~sv~ 480 (486)
T MTH00204 477 NSLV 480 (486)
T ss_pred HHEE
T ss_conf 7424
No 11
>PRK12561 NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Probab=100.00 E-value=0 Score=695.96 Aligned_cols=460 Identities=36% Similarity=0.705 Sum_probs=421.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCEEEEEEEEECCCC-CEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 303579999999999999999999-9863088881899986313485-40546652258899999999999999975201
Q gi|254780866|r 28 CGRRSFFGVALGISTINFIFSLFV-WSVFDKGRSSFQMIEYYHWIDY-FCSYHLGVDGISILLVVLTTFLTPFCILSSWK 105 (499)
Q Consensus 28 ~~~~~~~~i~~~~~~l~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~ 105 (499)
++.|..+.+++..+.+.+..+... +..++++...+|+.|.+.|++. .+++++++|++|..++.++++++.++.+++++
T Consensus 2 ~~~~~~r~~al~~s~~~~~l~~~~~~~~fd~~~~~~Q~~e~~~Wi~~~gi~~~lgvDglSl~~vlLt~~l~~l~i~~s~~ 81 (495)
T PRK12561 2 KEGKTVRWYALGVGLADFALMCYVFWQHYDPSSSSLQLVERYSWLPQIGLEWSLGVDGLSAPLVLLSGLVTTLSIAASWK 81 (495)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 86610069999999999999999999963899996589997553565698699962364599999999999999985223
Q ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 12100235678999863024302654043311123431034312355312343323210001135544556776665544
Q gi|254780866|r 106 SIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVM 185 (499)
Q Consensus 106 ~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l 185 (499)
.+++.++|+.+++++.++++|++.|+|++++|++||++++|+|.||++|++++|.+|+.||++++..|+.+++.|+..+
T Consensus 82 -~~~~~~~f~~l~Ll~~~~mlGvf~s~Dll~fyvfwE~~lipsy~LI~~wg~~~r~~Aa~k~~l~t~~Gs~~~L~~~~~l 160 (495)
T PRK12561 82 -VTRKPRLFFFLLLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASLFILIAGLAL 160 (495)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -3676318999999999999999998369999999999999998965617987999999999999999999999999999
Q ss_pred HHHHCC--CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
Q ss_conf 321000--100344321013303789999854103444554000232010100022223443333232233321110000
Q gi|254780866|r 186 CWEKKT--SSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFL 263 (499)
Q Consensus 186 ~~~~gs--~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~ 263 (499)
+.++|+ +|+.++.. .+.+...+.+.++++++||++|++++|||.|+||+|.|||+|+|+++||+++|+|.|+++|+.
T Consensus 161 ~~~~g~~t~~~~~l~~-~~~~~~~~~~~~~~~li~f~iK~~~fPfH~WLPdA~~eAPt~vS~lLagvl~K~G~YgliR~~ 239 (495)
T PRK12561 161 ALSGDTFTFDLTELGA-KSYPLALELLAYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMLLAGVLLKMGGYALIRFN 239 (495)
T ss_pred HHHCCCCHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9985650699999986-463358999999999999998620034611115666779943778889999998742335544
Q ss_pred CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 11122331000000000122222122111000024432233210013540233310487542210234555421023330
Q gi|254780866|r 264 LPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSAL 343 (499)
Q Consensus 264 ~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~l 343 (499)
.+++|+...++.+.+.++|++|+++|++.|++|+|+||++|||||+|+||++++++.+++.|++|+++|+++|++.|+++
T Consensus 240 ~~l~p~~~~~~~~~l~~lg~itii~gal~Al~Q~DlKrllAYSSIShmG~i~lGi~~~~~~g~~Gai~~mi~Hgl~ka~L 319 (495)
T PRK12561 240 VQMLPDAHIYFAPALIILGIVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAAL 319 (495)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 43053268888899999999999999999999856878998936989999999988758999998999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH-------HHHHHHHHH
Q ss_conf 3567777642001111002355654202332013455553010244431122899999998659-------999999999
Q gi|254780866|r 344 FFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSN-------TVAVLASFG 416 (499)
Q Consensus 344 Fl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~-------~~~~~~~~~ 416 (499)
|+++|.+++|+||||++++||+.|+||+++..+.++.+|++|+||++||+||++++.++++++. ...+++.++
T Consensus 320 Fl~aG~i~~r~~tr~i~~lgGL~~~mP~~~~~f~i~~la~~GlP~~~GF~se~lIl~G~~~~~~~~~~~~~~~~~~a~~g 399 (495)
T PRK12561 320 FFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSLASLALPGMSGFVSELTVFLGITSSDVYSSTFRTITILLAAVG 399 (495)
T ss_pred HHHHHHHHHHCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 99973899844956699968965431899999999999997402206099999999999860531136899999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999972889876--55568788912689999999999999772488999999999999852020
Q gi|254780866|r 417 VVLSALYSLWLYRKVVFGVSKCE--KVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRDTFSVPLSSIIENYTL 489 (499)
Q Consensus 417 ~~ls~~~~l~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~~~~~~~~~l~~~~~~ 489 (499)
.++++.|++|.++|+|+|+.+++ +.++.+|.+++|..++.+++++++.+|+||+++.|..+++++.++++.+-
T Consensus 400 ~ilta~Y~l~~~~rvf~G~~~~~~~~~~~~~dl~~rE~~~~~~l~~~~~~~G~yP~~~l~~~~~s~~~l~~~~~~ 474 (495)
T PRK12561 400 LILTPIYLLSMLRRVFYGPRSELIPALAVVEDAKPRELFIALSLLVPILGIGFYPKLATQLYDVKTVALAAQLRQ 474 (495)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999997138997666544458788787999999999999999748899996647889999999998
No 12
>MTH00217 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=691.80 Aligned_cols=472 Identities=43% Similarity=0.802 Sum_probs=436.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCC-EE---EEEE
Q ss_conf 7899999999999999872035530357999999999999999999998630888818999863134854-05---4665
Q gi|254780866|r 5 FLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYF-CS---YHLG 80 (499)
Q Consensus 5 ~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~l~ 80 (499)
.|++++++|+++++++.+.++.+ .++.+.+++..+.+.+..++..+..++.+ ..+|..+..+|++.. .+ ..++
T Consensus 1 ~L~~~i~lPllgal~l~~~p~~~--~~~~~~~~l~~sl~~l~~~l~l~~~f~~~-~~~q~~~~~~Wi~~~~~~~~~~~lg 77 (482)
T MTH00217 1 MLESIFILPLIGILALLIIPRDD--IMRLWKAGLEWSLLTLTGTILLWASFDGA-GQFQVVKRLDWIFGVEPGFGFVIFG 77 (482)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCEEEEEEECCCCCCCCCCCEEEEC
T ss_conf 95899999999999999939815--77899999999999999999999970788-8647999864101358664500125
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCC-CC
Q ss_conf 22588999999999999999752011210023567899986302430265404331112343103431235531234-33
Q gi|254780866|r 81 VDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGG-SE 159 (499)
Q Consensus 81 iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~-~~ 159 (499)
+|++|.+++.+++++..++.++++++.+++.++|+.+++++..+++|++.|+|++++|++||++++|+|.|++.|++ +|
T Consensus 78 vDgls~~lv~Lt~~l~~i~~l~s~~~~~~~~~~f~~~~L~~~~~~lGvf~s~Dl~~fyvf~E~~lip~y~LI~~wg~~~~ 157 (482)
T MTH00217 78 VDGISIFFIILTALLIPICVLISLKSIKFLIKEFLLCLLFIEVLLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREE 157 (482)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 64677999999999999999985374114278999999999999999999838999999999999999994536478989
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 23210001135544556776665544321000100344321013303789999854103444554000232010100022
Q gi|254780866|r 160 RIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQA 239 (499)
Q Consensus 160 ~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~a 239 (499)
|.+|+.||++++.+||.+++.|+..+|..+|++|++++... +.+.+.+.+.++++++|+++|++++|||.|+||+|+||
T Consensus 158 ~~~Aa~k~~l~t~~Gs~~~L~gi~~ly~~~Gt~~~~~l~~~-~~~~~~~~~~~~~~~i~f~vK~~~~PfH~WLPda~~~A 236 (482)
T MTH00217 158 KIQASYYFFFYTFIGSVFMLLGIFTLYSNAGSTDYQALCCL-KIEKELQYFVFIGFFLSLAIKIPKIPFHIWLPQAHVEA 236 (482)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999989999999999999998087429999975-04446899999999999999970520250350572238
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 22344333323223332111000011122331000000000122222122111000024432233210013540233310
Q gi|254780866|r 240 PTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIF 319 (499)
Q Consensus 240 p~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~ 319 (499)
|+++|++++|+++|+|.|+++|+..+++|+...++.+.+..+|++|+++|++.|++|+|+||++|||||+|+|+++++++
T Consensus 237 Pt~~S~llagvl~K~g~ygliR~~~~l~p~~~~~~~~~i~~l~~itii~ga~~Al~Q~diKrllAYSSIshmG~i~lgl~ 316 (482)
T MTH00217 237 PVAGSVVLAGVLLKLGGYGFIRFSWPLLPDAAEYFGPLILTLSLFAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGLF 316 (482)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 80688888898888756666999987550037664179999878889999999988316669999989989999999999
Q ss_pred CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHH
Q ss_conf 48754221023455542102333035677776420011110023556542023320134555530102444311228999
Q gi|254780866|r 320 SGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVI 399 (499)
Q Consensus 320 ~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~ 399 (499)
.++..|..|+++|+++|+++|+++|+++|.+++|+||||++++||+.|++|.++.++.++.+|++|+||++||+||++++
T Consensus 317 ~~~~~g~~ga~~~~i~H~~~~~~LFl~~g~i~~~~~t~~i~~~gGL~~~~P~~~~~~~i~~ls~~GlP~~~GF~ge~~i~ 396 (482)
T MTH00217 317 SHTIQGLVAAVFLMLAHGLVSSALFIAVTFLYDRYHTRLIKYYRGMAITMPLFGMLLLILVLANASIPLSCNFIGEFLSL 396 (482)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 72789999999999999999999999999999713853799958956659398999999999972578646289999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998659999999999999999999999999728898765556878891268999999999999977248899999999
Q gi|254780866|r 400 MSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRDTFSVP 479 (499)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~~~~~~ 479 (499)
.++++.+++..+++.++.++++.|++|.++++++|+.+++ .+..+|.+++|..++.+++++++.+|+||+++.|.++++
T Consensus 397 ~~~~~~~~~~~~~a~~~~il~a~Y~l~~~~~v~~g~~~~~-~~~~~d~~~~e~~~~~~L~~l~i~~Gl~P~~~ld~i~~s 475 (482)
T MTH00217 397 LAAFEYSFIAGVLASVGMVLSAGYSIYMYNRICFGAFSKY-LYFSRDLNRREFYSILPLVILIIIMGVFPFLVVDEVKGS 475 (482)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 9999985999999999999999999999999983898865-557799986599999999999999996429999766564
Q ss_pred HH
Q ss_conf 99
Q gi|254780866|r 480 LS 481 (499)
Q Consensus 480 ~~ 481 (499)
+-
T Consensus 476 v~ 477 (482)
T MTH00217 476 II 477 (482)
T ss_pred EE
T ss_conf 06
No 13
>PRK08376 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=690.19 Aligned_cols=491 Identities=22% Similarity=0.388 Sum_probs=427.2
Q ss_pred CCC-CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECC---CCCEE
Q ss_conf 983-07899999999999999872035530357999999999999999999998630888818999863134---85405
Q gi|254780866|r 1 MNL-PFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWI---DYFCS 76 (499)
Q Consensus 1 m~~-p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 76 (499)
||. ++|++++++|+++++++.+.++.++ |..+.++...+...++.++..+....+++...+......+. +...+
T Consensus 1 M~~~~lL~lli~iPl~~All~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 78 (513)
T PRK08376 1 MNGDTLLPLLIIIPLFGAFSMPIVSLAGG--KAREAWAVLISFATLLVGIQVFREVWEKGTIVYALGAEAPFGSGGFPIR 78 (513)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEE
T ss_conf 99765999999999999999999862272--4999999999999999999999999758983798611145457887746
Q ss_pred EEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCH--HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEE
Q ss_conf 4665225889999999999999997520112100--23567899986302430265404331112343103431235531
Q gi|254780866|r 77 YHLGVDGISILLVVLTTFLTPFCILSSWKSIQEN--FREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGV 154 (499)
Q Consensus 77 ~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~--~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~ 154 (499)
+.+++|++|..+..++++++.++.+|++++++++ .+||+.+++++.+++++++.|+|++++|++||++++++|.|+++
T Consensus 79 i~~~vD~ls~~~~ll~~~i~~l~~lys~~~~~~~~~~~~f~~l~ll~~~g~~g~~~s~dl~~~fvf~E~~~l~sy~Li~~ 158 (513)
T PRK08376 79 IVWEVDKFGAFMVLIAAIVSFLAVLYSISYMKHDTGLDKFYTLILILELGMLGIAITGDLFNFYVFLEIMSIASYALVAF 158 (513)
T ss_pred EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88766276699999999999999999579754898765999999999999999999827999999999999999999999
Q ss_pred CCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH-CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 234-33232100011355445567766655443210001003443210-1330378999985410344455400023201
Q gi|254780866|r 155 WGG-SERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMS-KFPFSIQYWMWIAFFCSFAIKIPMFPFHTWL 232 (499)
Q Consensus 155 ~~~-~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~-~~~~~~~~~~~~ll~~g~~~K~~~~PfH~Wl 232 (499)
+++ +++.||+.||++++.+|+.++++|+.++|..+||+|+.++.... +.+.....+...+++.|+++|+|++|||.|+
T Consensus 159 ~~~~~~~~~aa~ky~i~~~~gs~~~L~gi~~ly~~~Gs~~~~~l~~~~~~~~~~~~~~~~~l~~~g~~~K~a~~PfH~WL 238 (513)
T PRK08376 159 RNDTWEAIEAGIKYMFVGSLASSLVLLGIALLYGQYGTLTMGYLAVKMSENPTIVAKIALALFIAGLLFKSGAVPVHMWL 238 (513)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 49979999999999999999999999999999998087509999998751716999999999999999987261317463
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC-CCCCCCHHCCCCCCCC--CCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
Q ss_conf 0100022223443333232233-3211100001112233--100000000012222212211100002443223321001
Q gi|254780866|r 233 PNAHVQAPTAGSVFLAGIMLKM-GGYGCIRFLLPLFPLA--SQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIA 309 (499)
Q Consensus 233 P~~y~~ap~~~salls~~~~k~-g~~~l~r~~~~l~~~~--~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~ 309 (499)
||+|++||+|+|+++|++..|+ |.|+++|+..++++.. .....+.+.++|++|+++|++.|+.|+|+||++|||||+
T Consensus 239 Pday~~APt~vSallsg~~~k~ag~y~l~r~~~~~f~~~~~~~~~~~~l~~lg~~t~~~G~~~Al~Q~d~KrlLAYSSIs 318 (513)
T PRK08376 239 ADAHPAAPSSISAMLSGLVIKIGGIYAIARILFSIYGPTINPATVGWVIIIFACLTLIVGNAMAVPQKDMKRLLAYSSVG 318 (513)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 00424286299999999999999999999999997430545789999999999999999999997610288999985899
Q ss_pred CCCHHHHHHCCCC--------CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 3540233310487--------54221023455542102333035677776420011110023556542023320134555
Q gi|254780866|r 310 HMGYVTIGIFSGM--------KSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTM 381 (499)
Q Consensus 310 ~~G~i~~~l~~~~--------~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~l 381 (499)
|+||++++++.++ +.++.++++|++||+++|+++|+++|.+++++||+|++|+||+.|+||+++.++.++.+
T Consensus 319 q~G~illgi~~g~~~~~~~~~~~~~~ga~~~~i~H~~~k~~LFl~~G~i~~~~gt~~i~~lgGL~~~~P~~a~~f~i~~l 398 (513)
T PRK08376 319 QIGYILLGLGIGLAAYGSRTGEIALAGAIYHIVNHALMKALLFLVAGAVIHELGTRNLNELSGLAKTMPKTTFAFLIGAA 398 (513)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999985012002210588999999999999999999999988999833776199864978773999999999999
Q ss_pred HHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 53010244431122899999998659999999999999999999999999728898765556878891268999999999
Q gi|254780866|r 382 ANMGLPGTSGFIGEFLVIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVL 461 (499)
Q Consensus 382 sl~G~Pp~~GF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 461 (499)
|++|+||++||+||++++++.++.++++..++++++.+++.|++|.++ .+++++++ +..+.+|.+++|..++.++++.
T Consensus 399 sl~GlPp~~GF~sK~~i~~~~~~~~~~l~~i~~~~s~~~~~~~~r~~~-~~fg~~~~-~~~~~~~~~~~~~~~~~vl~~~ 476 (513)
T PRK08376 399 AIVGMPPLNGFASKWLIYESSALFNPILGAIAIIGTAFCTAAYVRVLH-TFFGRPSE-KVMNAKDPPKLMLLPMIILVIA 476 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCC-CCCCCCCCCHHHHHHHHHHHHH
T ss_conf 999887870699999999999998499999999999999999999999-99399985-5578889977599999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 9999772488999-9999999998520200222013679
Q gi|254780866|r 462 TVFFGIYPVPIRD-TFSVPLSSIIENYTLKTGYSDSVKG 499 (499)
Q Consensus 462 ~i~lGi~p~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~g 499 (499)
++.+|++|+++.| ..+++++.+.| +.+|+++|.|
T Consensus 477 ~i~~Gl~P~~~~~~~~~~aa~~l~d----~~~yi~~vl~ 511 (513)
T PRK08376 477 IIGMGLFPWQISDKLMAPAARALWD----YIGYIASLMG 511 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC----HHHHHHHHCC
T ss_conf 9999971599999999999998719----2889998138
No 14
>PRK12667 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=683.47 Aligned_cols=491 Identities=23% Similarity=0.395 Sum_probs=420.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEE
Q ss_conf 983078999999999999998720-3553035799999999999999999999863088881899986313485405466
Q gi|254780866|r 1 MNLPFLSIVTFLPFLGVFVILFSS-YLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHL 79 (499)
Q Consensus 1 m~~p~l~lii~lPll~~li~~~~~-~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (499)
||.+++++.+.+|++..++..+.. ..+++|+..+.++...+.+.++.++..+....+++.. +..+..+|.++ .++.+
T Consensus 1 ~~~~~l~l~P~l~vl~~~~~~ll~~l~~~~~~~~~~~a~~~~~l~~~~s~~~~~~~~~~~~~-~~~~~g~w~~~-~gi~~ 78 (517)
T PRK12667 1 MAMDVVGLTPLLLVLFAFLLPLLSIIIRGNRKIIQIYALLGTLLALISSILLFIQVYNSGKP-IVYLFGGWPAP-FGIVY 78 (517)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE-EEEEECCCCCC-CCCEE
T ss_conf 97538999999999999999999998558701899999999999999999999998369972-89872167777-68456
Q ss_pred EEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCC
Q ss_conf 52258899999999999999975201121--0023567899986302430265404331112343103431235531234
Q gi|254780866|r 80 GVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGG 157 (499)
Q Consensus 80 ~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~ 157 (499)
.+|++|..+..++++++.++.+|+++|++ ++.++|+.+++++.+++++++.|+|++++|++||++++++|.|+++|++
T Consensus 79 ~vD~ls~~~~ll~~~v~~l~~lys~~y~~~~~~~~~f~~l~ll~~~g~~g~~~s~dl~~~fvf~El~~i~sy~Li~~~~~ 158 (517)
T PRK12667 79 EVDLLGALIGLLTALLMFLILIYSYWYLEHEDGNEWYYTLYLGLEAGMLGVLLTGDAFNLFVMLEVLSISAYGLVAYYRD 158 (517)
T ss_pred EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 54173699999999999999999999854898641799999999999999999745999999999999999999988299
Q ss_pred -CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCH------------HHHHHHHHHHHCCCCCCCC
Q ss_conf -332321000113554455677666554432100010034432101330------------3789999854103444554
Q gi|254780866|r 158 -SERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPF------------SIQYWMWIAFFCSFAIKIP 224 (499)
Q Consensus 158 -~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~------------~~~~~~~~ll~~g~~~K~~ 224 (499)
+++.||++||++++.+|+.++++|+..+|..+||+|+.|+....+... ........++++||++|+|
T Consensus 159 ~~~~~~Aa~ky~i~~~~gs~~~L~gi~~ly~~~Gs~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ligf~~K~~ 238 (517)
T PRK12667 159 RGDAVEAAIKYALIGAVGTTMYFLALVILYGTYGTLNMADLSLKIHGLSGAGETTGVGNVPWASGLALALALWAFTIKAA 238 (517)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 89999999999999999999999999999999778519999999753034566664200689999999999999999856
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC------CCCCCHHHCCCCCCCCCCCCCCCEECC
Q ss_conf 00023201010002222344333323223332111000011122331------000000000122222122111000024
Q gi|254780866|r 225 MFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLAS------QYFAPVIFFLSLIAIIYASLVSMVQTD 298 (499)
Q Consensus 225 ~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~------~~~~~~l~~l~~~t~~~g~l~al~q~d 298 (499)
++|||.|+||+|++||+|+|+++|++++|+|.|+++|+..++++... ..+..++.++|.+|+++|++.|++|+|
T Consensus 239 l~PfH~WLPday~~APt~vSalls~~~~k~g~y~liR~~~~~~~~~~~~~~~~~~~~~~l~~lg~~s~i~g~~~Al~Q~d 318 (517)
T PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGSSPSLADARAILLFIIVILGAVSAIIGALMMVGQRD 318 (517)
T ss_pred CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_conf 06324665256323983776998899999999999999999723442115579999999999999999999999998440
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHH
Q ss_conf 43223321001354023331048754221023455542102333035677776420011110023556542023320134
Q gi|254780866|r 299 IKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMV 378 (499)
Q Consensus 299 ~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i 378 (499)
+||++|||||+|+||++++++.+++.|..++++|+++|++.|+++|+++|.+++++|++|++|+||+.|++|.++.++.+
T Consensus 319 lKrlLAYSsIs~~G~i~lgi~~~~~~g~~~al~~~i~h~l~k~~LFl~~g~i~~~~gt~~i~~l~GL~~~~P~~a~~~~i 398 (517)
T PRK12667 319 VKRLLAYSTISHIGYIFMGIGIGTQLGLQAALFHIINHAIAKALLFLASGVFIHAAGTRDIDELAGLGRTMPIASFALLI 398 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHH
T ss_conf 77999984287899999999864399999999999999999999999999999980885079865688882999999999
Q ss_pred HHHHHCCCHHHHHHCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 5555301024443112289999999865999-999999999999999999999972889876555687889126899999
Q gi|254780866|r 379 FTMANMGLPGTSGFIGEFLVIMSVFQNSNTV-AVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYP 457 (499)
Q Consensus 379 ~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~~~-~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 457 (499)
+.+|++|+||++||+||+++++++++++.++ ..++.+++.+++.|++|.++++|+|+++++. ++.+|.+++|..|+.+
T Consensus 399 ~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~l~s~it~~y~lr~~~~~f~g~~~~~~-~~~~~~~~~~~~~~~~ 477 (517)
T PRK12667 399 GTLSLVGIPPFNGFFSKLLLFNALLESGFYLPAIVILISSAISLVGYMRAWYLIIFGKPRSGE-GKRVKESPSISLPILI 477 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCHHHHHHHHH
T ss_conf 999999887875699999999999972899999999999999999999999998269998644-4567886447999999
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCHHHHHCCCC
Q ss_conf 99999999772488999-999999999852020022201367
Q gi|254780866|r 458 IAVLTVFFGIYPVPIRD-TFSVPLSSIIENYTLKTGYSDSVK 498 (499)
Q Consensus 458 l~~~~i~lGi~p~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~ 498 (499)
+++.++.+|++|+++.+ ..+++++.++| ++.|+++|.
T Consensus 478 l~~~~v~~G~~p~~i~~~~~~~aa~~l~~----~~~yi~~vl 515 (517)
T PRK12667 478 LALIVLILGLFAPPIVEQLIQPIVEQIMD----YQPYIDAAL 515 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CHHHHHHHH
T ss_conf 99999999971599999999999998729----188999983
No 15
>PRK08377 NADH dehydrogenase subunit N; Validated
Probab=100.00 E-value=0 Score=682.86 Aligned_cols=483 Identities=22% Similarity=0.377 Sum_probs=415.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEE
Q ss_conf 98307899999999999999872035530357999999999999999999998630888818999863134854054665
Q gi|254780866|r 1 MNLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLG 80 (499)
Q Consensus 1 m~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (499)
||. ++++++++|+++++++.+.+..+ ++..+......+.+....+...+......+.. ...+...|.++ .++.+.
T Consensus 1 M~~-l~sLlI~lPli~A~l~~ll~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~g~~-~~~~~~~W~~~-~gi~~~ 75 (493)
T PRK08377 1 MSQ-VASLLIALPLISAFFVPVLKGIG--KSLIMPYLVLITLLQTGIAGWVFYEVYTTGKP-IIIMAGGWKPP-VGINLY 75 (493)
T ss_pred CCH-HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-EEEEECCCCCC-CCEEEE
T ss_conf 974-88999999999999999986330--68999999999999999999999998158981-79983175786-370778
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 225889999999999999997520112100-2356789998630243026540433111234310343123553123433
Q gi|254780866|r 81 VDGISILLVVLTTFLTPFCILSSWKSIQEN-FREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSE 159 (499)
Q Consensus 81 iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~-~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~ 159 (499)
+|+++..+..+++.++.++.+|+.++.+++ .++|+.+++++..+++|++.|+|++++|++||++++++|.|++++++++
T Consensus 76 ~d~ls~~~~ll~~~v~~~~~~ys~~~~~~~~~~~~~~l~ll~~~g~~g~~~s~Dl~~lfvf~E~~~i~sy~Li~~~~~~~ 155 (493)
T PRK08377 76 IGHFAALFVLIIAVVSFFTALFSFRAVKVEPIDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGE 155 (493)
T ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 88554899999999999999999988436862409999999999999999981699999999999999999999879889
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC-CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 23210001135544556776665544321000100344321013-30378999985410344455400023201010002
Q gi|254780866|r 160 RIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKF-PFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQ 238 (499)
Q Consensus 160 ~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~-~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ 238 (499)
+.||+.||++++.+|+.++++|+.++|..+||+|+.++....+. +.......+.+++.|+++|++++|||+|+||+|++
T Consensus 156 ~~~Aa~ky~i~~~~gs~~~L~gi~lly~~~Gt~~~~~l~~~~~~~~~~~~~~~~~l~~~gf~~K~~~fPfH~WlPday~~ 235 (493)
T PRK08377 156 AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHLAQLAAAIDPTVAQVGLALIIFGLAVEAELFPLNAWAPDAYQA 235 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCC
T ss_conf 99999999999999999999999999998089759999998624573899999999999999885706107774454446
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC-CCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHH
Q ss_conf 22234433332322333211100001112233-10000000001222221221110000244322332100135402333
Q gi|254780866|r 239 APTAGSVFLAGIMLKMGGYGCIRFLLPLFPLA-SQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIG 317 (499)
Q Consensus 239 ap~~~salls~~~~k~g~~~l~r~~~~l~~~~-~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~ 317 (499)
||+++|++++++++|+|+|+++|+.....+.. ...+.+++.++|.+|+++|++.|++|+|+||++|||||+|+||++++
T Consensus 236 apt~vsalls~~~~k~g~y~l~R~~~~~~~~~~~~~~~~~l~~l~~~t~~~G~~~Al~Q~dlKrllAYSsIsq~G~i~lg 315 (493)
T PRK08377 236 APHPITVMFSAFVVKAGLYAMARILYLLQKVNGWSSVLKLLIIMATLTVVFAELSALRQKDVKRMIAYSSIGQVGLIALA 315 (493)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 89860788889999999999999999732301269999999999999999999999985055099999899999999999
Q ss_pred HCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHH
Q ss_conf 10487542210234555421023330356777764200111100235565420233201345555301024443112289
Q gi|254780866|r 318 IFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFL 397 (499)
Q Consensus 318 l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~ 397 (499)
++.+++.|.+++++|+++|+++|+++|+++|.+++++|++|++|++|+.|++|+++.++.++.+|++|+||++||+||++
T Consensus 316 i~~~~~~g~~~a~~~l~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~GL~~~~P~~a~~~~i~~lsl~GiPp~~GF~~K~~ 395 (493)
T PRK08377 316 FSLGTQAGVDAGVFHMLNHAIVKAMMFLAVGYVGITLGGTEIENFQGLGKRMPLTALALTIGAVATVGVPLFNVFWSKFR 395 (493)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99577989999999999999999999999999999838875999659786628999999999999998877646999999
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999865-9999999999999999999999999728898765556878891268999999999999977248899999
Q gi|254780866|r 398 VIMSVFQNS-NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRDTF 476 (499)
Q Consensus 398 i~~~~~~~~-~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~~~ 476 (499)
+++++++++ +|..+++.+++++++.|++|.++++|+++++++..+ ..+..++.++++.++.+|++|+|+.+..
T Consensus 396 i~~aa~~~~~~~~~~~~~i~svis~~Y~lr~i~~~ff~~~~~~~~~------~~~~~~~~~l~~~~i~lGi~P~p~~~~~ 469 (493)
T PRK08377 396 IILATLQAGYTWPAALVLFASVVEAVYYFRLIHTMWFEGEGERIKE------GWIGVFLLLLAALIVVIGVYPTPVWEIV 469 (493)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999998396999999999999999999999999942888755540------0289999999999999996379899999
Q ss_pred HHHHHHHHHHCCCHHHHHCCCC
Q ss_conf 9999999852020022201367
Q gi|254780866|r 477 SVPLSSIIENYTLKTGYSDSVK 498 (499)
Q Consensus 477 ~~~~~~l~~~~~~~~~~~~~~~ 498 (499)
++++++++| ++.|+++|.
T Consensus 470 ~~aa~~l~d----~~~yi~~v~ 487 (493)
T PRK08377 470 KKAGSDIFN----VANYVKNVP 487 (493)
T ss_pred HHHHHHHCC----HHHHHHHCC
T ss_conf 999998709----797851117
No 16
>TIGR01974 NDH_I_L proton-translocating NADH-quinone oxidoreductase, chain L; InterPro: IPR003945 NADH-plastoquinone oxidoreductase chain 5 is part of the NADH-ubiquinone oxidoreductase (complex I), which catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane : NADH + ubiquinone = NAD(+) + ubiquinol ; GO: 0008137 NADH dehydrogenase (ubiquinone) activity, 0042773 ATP synthesis coupled electron transport.
Probab=100.00 E-value=0 Score=681.43 Aligned_cols=465 Identities=23% Similarity=0.395 Sum_probs=415.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCEEEEEEEEECCC---CCEEEEEE
Q ss_conf 789999999999999987203553035799999999999999999999863088-88189998631348---54054665
Q gi|254780866|r 5 FLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKG-RSSFQMIEYYHWID---YFCSYHLG 80 (499)
Q Consensus 5 ~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~l~ 80 (499)
++.+++++|++|+++..+.+.. .++|....++.....++++.+...+..+..+ +........++|++ +..++++.
T Consensus 2 l~~~iv~lPLiGfl~aglfg~~-~~~~~~~~~~~~~~~~S~~l~~~~f~~~~~~~~~~~~~~~Lf~Wi~~g~l~v~~~~~ 80 (691)
T TIGR01974 2 LIFLIVFLPLIGFLIAGLFGRR-IGKKASGIIGIGLVGVSAALSAYVFVDFLLNGEGEAFTQSLFPWISVGGLQVNFGLR 80 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCEEEEEEE
T ss_conf 7999999999999999987556-765336899999999999999999998623788734888612224416710433456
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 225889999999999999997520112--100235678999863024302654043311123431034312355312343
Q gi|254780866|r 81 VDGISILLVVLTTFLTPFCILSSWKSI--QENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS 158 (499)
Q Consensus 81 iD~ls~~f~~l~~~i~~l~~~ys~~~~--~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~ 158 (499)
+|++|..|+.+++.|+.++++||..|+ ||+++||+.+++++..+|+.+++|||++++|++||.+++|||+||++|.++
T Consensus 81 ~D~Ls~~Ml~vvTgVs~LvHiYS~gYM~~D~g~~RFFaYLsLF~fsML~LV~aDNfl~LF~GWEGVGLcSYLLIGFwy~k 160 (691)
T TIGR01974 81 VDQLSLTMLIVVTGVSLLVHIYSIGYMAHDEGRSRFFAYLSLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKK 160 (691)
T ss_pred EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 40068899999999988987640032147888860477888999999999987568988886789889978741112467
Q ss_pred -CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHH--------------HHHHHHHHHHCCCCCCC
Q ss_conf -323210001135544556776665544321000100344321013303--------------78999985410344455
Q gi|254780866|r 159 -ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFS--------------IQYWMWIAFFCSFAIKI 223 (499)
Q Consensus 159 -~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~--------------~~~~~~~ll~~g~~~K~ 223 (499)
++..||.|.|++||+||..+++|+.++|.+.||+|++++....+.... .-.++-+++++|.+.|+
T Consensus 161 ~sA~~AA~KAFvvNRVGD~g~~lGif~~f~~fGtl~f~~vf~~~~~~~~~G~~~~~~~g~~~~~l~~i~llLf~GAmGKS 240 (691)
T TIGR01974 161 PSANNAAIKAFVVNRVGDFGLLLGIFLIFAYFGTLNFQEVFALAQNLDLEGATTIEFLGAEFSALTLICLLLFIGAMGKS 240 (691)
T ss_pred CCHHHCCCCCEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 42541021142110378899999999999987762078999888642211578998731322189999999997355775
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCC
Q ss_conf 4000232010100022223443333-232233321110000111223310000000001222221221110000244322
Q gi|254780866|r 224 PMFPFHTWLPNAHVQAPTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKL 302 (499)
Q Consensus 224 ~~~PfH~WlP~~y~~ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~Krl 302 (499)
||+|+|+||||+ ||.||||||+.| ++|+.+|+|.+.|.. |+|. ..++..+++.++|.+|+++++..|+.|+|+||+
T Consensus 241 AQlpLHtWLpDA-MeGPTPVSALIHAATMVTAGVyLvaR~s-pLF~-l~p~al~~v~iiGA~TalFaA~~alvQ~DIKRi 317 (691)
T TIGR01974 241 AQLPLHTWLPDA-MEGPTPVSALIHAATMVTAGVYLVARTS-PLFE-LSPTALYLVTIIGAITALFAATVALVQNDIKRI 317 (691)
T ss_pred HHHHHHCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHC-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 200100246346-7987820177764477678899999734-0343-466788857899999999999999987216674
Q ss_pred CCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC-CCCCCHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 33210013540233310487542210234555421023330356777764200-11110023556542023320134555
Q gi|254780866|r 303 IAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLH-TRDIFAYGGLVHNMPRYAVVMMVFTM 381 (499)
Q Consensus 303 lAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g-~~~l~~l~Gl~~~~P~~~~~~~i~~l 381 (499)
+||||+||.|||.+++|++ |.++..|++|+++|+++|++||+++|.+.+-.+ |+|+++||||.|++|.+..+|.||.+
T Consensus 318 lAYST~SQLGYMF~A~Gvg-P~AY~aAiFHL~THAFFKALLFLgaGsVIhAmhhEqdirkMGgL~K~~P~Ty~~f~iG~l 396 (691)
T TIGR01974 318 LAYSTCSQLGYMFLALGVG-PIAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKLPVTYITFLIGSL 396 (691)
T ss_pred HHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 4764111888999983576-678999999999999999889986567876423760023513201323899999999999
Q ss_pred HHCC--CH----HHHHHCCHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--------
Q ss_conf 5301--02----444311228999999986------599999999999999999999999997288987655--------
Q gi|254780866|r 382 ANMG--LP----GTSGFIGEFLVIMSVFQN------SNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKV-------- 441 (499)
Q Consensus 382 sl~G--~P----p~~GF~~k~~i~~~~~~~------~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~-------- 441 (499)
|++| +| ||+||+||+.|+|+++.+ +.....+.+++..+|+.|++|...-+|+|++|.++.
T Consensus 397 AL~Gli~Pg~~l~faGFfSKD~Ile~A~~~GG~~~~~~~~~~~gl~~A~~TafYsfRl~f~~FhG~~~~~~~~~~~~d~h 476 (691)
T TIGR01974 397 ALIGLIFPGTVLGFAGFFSKDLILEAAFASGGHSATGSFLFVAGLIGAFLTAFYSFRLIFLVFHGKERWEADSEHHSDKH 476 (691)
T ss_pred HHHHHHHCCHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCC
T ss_conf 99997222144431554431489999985368427889999999999999999999988876367312245678889888
Q ss_pred ----------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ----------568788912689999999999999772488999
Q gi|254780866|r 442 ----------QQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRD 474 (499)
Q Consensus 442 ----------~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~ 474 (499)
++.+|.|+.+..|+.+|++++++.|.+-.+.++
T Consensus 477 g~e~~G~g~~~H~HE~~~~m~~PL~~L~~gs~~~G~~~~~~~~ 519 (691)
T TIGR01974 477 GEEDHGLGKAHHPHESPLVMLLPLIVLAVGSVFAGFLIVPLFF 519 (691)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7556889888888987314588899999999998999997651
No 17
>PRK12662 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=675.27 Aligned_cols=477 Identities=23% Similarity=0.406 Sum_probs=418.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEE
Q ss_conf 98307899999999999999872035530357999999999999999999998630888818999863134854054665
Q gi|254780866|r 1 MNLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLG 80 (499)
Q Consensus 1 m~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (499)
|+.-++.+.+++|++++++..+.+. +|..+.++...+...+..+...+....+++. +..+...|.++ .++.++
T Consensus 1 M~~~lp~L~i~iPli~a~l~~l~~~----~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~--~~~~~~~w~~~-~gi~l~ 73 (491)
T PRK12662 1 MKSSLPILQVIIPLLSAVVCALLKN----HKLVKIISFIVVTVSFFIALVLFVQVYSGGV--IKYSLGGWAPP-YGIELR 73 (491)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--EEEEECCCCCC-CCCEEE
T ss_conf 9213899999999999999999767----3079999999999999999999999848995--69862046777-682565
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHCCCCCC-----HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEEC
Q ss_conf 22588999999999999999752011210-----0235678999863024302654043311123431034312355312
Q gi|254780866|r 81 VDGISILLVVLTTFLTPFCILSSWKSIQE-----NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVW 155 (499)
Q Consensus 81 iD~ls~~f~~l~~~i~~l~~~ys~~~~~~-----~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~ 155 (499)
+|++|..+..+++.+++++.+|+..+.++ +.++|+.+++++.+++++++.|+|++++|++||++++++|.|++++
T Consensus 74 vD~ls~~~~ll~~~i~~~~~lys~~~~~~~~~~~~~~~f~~l~ll~~~~~~g~~~s~dl~~~fvf~E~~~i~sy~LI~~~ 153 (491)
T PRK12662 74 VDILNATMLVLVNFIAVMSVLYGIYPNEKEISVNKIPSFYSVFLLCLSGLLGILVSNDVFNIYVFLEISSISSYVLVAMG 153 (491)
T ss_pred ECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 50766899999999999999998466525754005889999999999999999998489999999999999999999977
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC-CH-HHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 343323210001135544556776665544321000100344321013-30-3789999854103444554000232010
Q gi|254780866|r 156 GGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKF-PF-SIQYWMWIAFFCSFAIKIPMFPFHTWLP 233 (499)
Q Consensus 156 ~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~-~~-~~~~~~~~ll~~g~~~K~~~~PfH~WlP 233 (499)
+++++.+|++||++++.+|+.++++|+.++|..+||+|+.++....+. +. ....+...++++|+++|+|++|||.|+|
T Consensus 154 ~~~~~~~aa~ky~i~~~~gs~~~L~gi~~ly~~~Gt~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~K~~~~PfH~WlP 233 (491)
T PRK12662 154 KDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGTLFIMVGLFIKAALFPFHKWLI 233 (491)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHC
T ss_conf 98899999999999999999999999999999966654999999977455443999999999999999980711345605
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC----CCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
Q ss_conf 1000222234433332322333211100001112233----100000000012222212211100002443223321001
Q gi|254780866|r 234 NAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLA----SQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIA 309 (499)
Q Consensus 234 ~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~----~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~ 309 (499)
|+|++||+++|+++|++++|+|.|+++|+..+++++. ...+..++.++|++|+++|++.|++|+|+||++|||||+
T Consensus 234 da~~~ap~~~salls~~~~k~g~y~l~R~~~~~~~~~~~~~~~~~~~~l~~lg~~t~i~g~~~Al~Q~diKrllAYSsIs 313 (491)
T PRK12662 234 QAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNIVFMILAALAIVFGSILAILSKDIKRIFAYSSIA 313 (491)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 77777993788999999999999999999998542057886678999999999999999999999855652999999999
Q ss_pred CCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHH
Q ss_conf 35402333104875422102345554210233303567777642001111002355654202332013455553010244
Q gi|254780866|r 310 HMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGT 389 (499)
Q Consensus 310 ~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~ 389 (499)
|+||++++++.+++.|..++++|+++|+++|+++|+++|.+++++|++|++++||+.|++|.++.++.++.+|++|+||+
T Consensus 314 q~G~i~~gi~~~~~~g~~ga~~~~~~h~~~k~~LFl~~G~i~~~~gt~~i~~l~GL~~~~P~~a~~~~i~~lsl~GlPp~ 393 (491)
T PRK12662 314 HIGYIIFAVSLNTYYGLAAAVAYIINHSLVKSALFMVAGSISYKFGNTKLEDCSNLWKSMPKITLAFVLLSLSLIGMPLT 393 (491)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999997576889999999999999999999999999986498708986581867499999999999999987687
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 43112289999999865999999-9999999999999999999728898765-556878891268999999999999977
Q gi|254780866|r 390 SGFIGEFLVIMSVFQNSNTVAVL-ASFGVVLSALYSLWLYRKVVFGVSKCEK-VQQLKDLSLRERCMVYPIAVLTVFFGI 467 (499)
Q Consensus 390 ~GF~~k~~i~~~~~~~~~~~~~~-~~~~~~ls~~~~l~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~l~~~~i~lGi 467 (499)
+||+||+++++++++++.|.... ..+++.+++.|++|.++++|++++++++ .++.+|.|+.|..++.++++.++.+|+
T Consensus 394 ~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~lt~~Y~lr~~~~~f~~~~~~~~~~~~~~~~p~~m~~~~~ila~~~i~lGl 473 (491)
T PRK12662 394 SGFISKWYILDAIIKSNAWIGLVVLLVGSGLSVIYVWKIVEALYFESSDVSVVAMTLFKTPNVMVLCIWIMAILSIIVGI 473 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 57999999999999876899999999999999999999999998399974335677777989999999999999999997
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 24889999999999998
Q gi|254780866|r 468 YPVPIRDTFSVPLSSII 484 (499)
Q Consensus 468 ~p~~~~~~~~~~~~~l~ 484 (499)
||+|+.+..+++++.++
T Consensus 474 ~P~pl~~i~~~~a~~ll 490 (491)
T PRK12662 474 YPIPLTLISNKIAFLLL 490 (491)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 35989999999999972
No 18
>PRK12665 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=675.71 Aligned_cols=486 Identities=20% Similarity=0.365 Sum_probs=422.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEE
Q ss_conf 98307899999999999999872035530357999999999999999999998630888818999863134854054665
Q gi|254780866|r 1 MNLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLG 80 (499)
Q Consensus 1 m~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (499)
||. ++.+++++|++++.+..+.+.. ++..+.++.......++.+.......++++ .+..+..+|.++ .++.+.
T Consensus 1 M~~-Ll~l~vliPll~a~l~l~~~~~---~~~~r~i~l~~~~~~l~~~~~ll~~~~~~g--~~~~~~g~w~~p-~GI~l~ 73 (524)
T PRK12665 1 MSV-LVPLPVLLPLLAAALTLILGRR---PRLQRAISVLVLAAVLALSAVLLYLVDRDG--TLAVQVGGWAAP-IGITLV 73 (524)
T ss_pred CCH-HHHHHHHHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCC-CCEEEE
T ss_conf 971-8999999999999999997477---007999999999999999999999982798--479987547777-432888
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHCCCCC------CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEE
Q ss_conf 2258899999999999999975201121------0023567899986302430265404331112343103431235531
Q gi|254780866|r 81 VDGISILLVVLTTFLTPFCILSSWKSIQ------ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGV 154 (499)
Q Consensus 81 iD~ls~~f~~l~~~i~~l~~~ys~~~~~------~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~ 154 (499)
+|++|..+..+++++++.+.+|+..+.. ++.+.|+.+++++..|+++.+.|+|++++|++||++++++|.|+.+
T Consensus 74 ~D~ls~lmlll~~~v~l~~~iys~~~~~~~~~~~~~~~~F~~l~lll~~g~~g~flt~DLfnlfVf~Ev~~i~sy~Li~~ 153 (524)
T PRK12665 74 VDRLSALMLVVSSIVLLAVLVYAIGQGIRDGDEEQPVSIFHPTYLILSAGVSNAFLAGDLFNLYVGFEVLLVASYVLLTL 153 (524)
T ss_pred ECHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76766999999999999999997635442656331178999999999999999999837999999999999999999995
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH-HCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 2343323210001135544556776665544321000100344321-013303789999854103444554000232010
Q gi|254780866|r 155 WGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAM-SKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLP 233 (499)
Q Consensus 155 ~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~-~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP 233 (499)
+++++|.++++||++++.+|+.++++|+.++|..+||+|+.++... .+.+.........+++++|++|+++||||+|+|
T Consensus 154 ~~~~~~~~Aa~ky~i~~~~gs~~~L~gi~~ly~~tGtln~~~l~~~~~~~~~~~~~~~~~lll~~f~~Kaa~fPlH~WLP 233 (524)
T PRK12665 154 GATAARIRAGVTYVMVSMVSSLLFLIGIAMVYAATGTLNMADLAVRLDDLPEGTRMALFAVLLVAFGIKAAVFPLSFWLP 233 (524)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 79889999999999999999999999999999980887799999987408813899999999999999982712097875
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCH
Q ss_conf 10002222344333323223332111000011122331000000000122222122111000024432233210013540
Q gi|254780866|r 234 NAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGY 313 (499)
Q Consensus 234 ~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~ 313 (499)
|+|+++|+|+|++++++++|+|+|+++|+...++++ +.+..++.++|.+|+++|++.|+.|+|+||++|||||+|+||
T Consensus 234 ~ay~~apt~vsAllag~~~KvGvy~liR~~~~~f~~--~~~~~~l~~lg~~t~~~g~l~Al~q~dlKrllAYssisq~G~ 311 (524)
T PRK12665 234 DSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPG--GGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGY 311 (524)
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 164009845789999999999999999999983454--899999999999999999999986411769999999999999
Q ss_pred HHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHC
Q ss_conf 23331048754221023455542102333035677776420011110023556542023320134555530102444311
Q gi|254780866|r 314 VTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFI 393 (499)
Q Consensus 314 i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~ 393 (499)
++++++.+++.++.++++|+++|+++|+.+|+++|.+++++|++|+++++|+.|++|+++.+|.++.+|++|+||++||+
T Consensus 312 il~gi~~~~~~g~~gal~~l~~h~l~k~~LFl~aG~i~~~~g~~~l~~lgGl~~~~P~~a~~f~i~alsl~GlPp~sGF~ 391 (524)
T PRK12665 312 MVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAAASPLLAVLFFVPALNLGGIPPFSGFI 391 (524)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999966399999999999999999999999999999854858599866958651999999999999998665652599
Q ss_pred CHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--------------------------CC
Q ss_conf 2289999999865999----99999999999999999999997288987655--------------------------56
Q gi|254780866|r 394 GEFLVIMSVFQNSNTV----AVLASFGVVLSALYSLWLYRKVVFGVSKCEKV--------------------------QQ 443 (499)
Q Consensus 394 ~k~~i~~~~~~~~~~~----~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~--------------------------~~ 443 (499)
||+++++++++.+.++ ...+++++.++..|+.|++.++||++++++++ ++
T Consensus 392 ~K~~i~~aa~~~~~~~~~~~~~~~l~~s~~tl~~~~r~~~~~Fw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (524)
T PRK12665 392 GKVALLEAGAADGTWLAWALVAGGVATSLLTLYAVARVWNKAFWRSREDAPEGALALAAPAALLDDTDESDDIAFKDRVD 471 (524)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999986398289999999999999999999999999865999877775422335443334433334431101233
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 87889126899999999999997724889999999999998520200222013679
Q gi|254780866|r 444 LKDLSLRERCMVYPIAVLTVFFGIYPVPIRDTFSVPLSSIIENYTLKTGYSDSVKG 499 (499)
Q Consensus 444 ~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g 499 (499)
.++.++.+..|...++..++.+|++|+|+.+..+++++.++| +++|+++|.|
T Consensus 472 ~~~~~~~~~~p~~~L~~~~~~~g~~~~pl~~~~~~aA~~L~d----~~~Yi~aVlg 523 (524)
T PRK12665 472 VGRMPRGMVGATAGLVAVGLALTVFAGPLFAISDRAAEELLD----RSSYITAVLG 523 (524)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CHHHHHHCCC
T ss_conf 234537799999999999999998399999999999998519----3649987429
No 19
>PRK12666 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=673.48 Aligned_cols=485 Identities=18% Similarity=0.276 Sum_probs=420.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEE
Q ss_conf 98307899999999999999872035530357999999999999999999998630888818999863134854054665
Q gi|254780866|r 1 MNLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLG 80 (499)
Q Consensus 1 m~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (499)
||. ++.+.+++|+++++++.+.+.. +++..+.++...+...++.++..+.....++.. ..+..+|.++. ++.+.
T Consensus 3 M~~-L~~l~IliPl~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~--~~~~g~W~~~f-GI~l~ 76 (509)
T PRK12666 3 MNH-LIILPILLPLLAAALLLLLDER--RRRLKRAISLASTLLLLAVAVALLARAADGQIG--VYLLGNWPAPF-GIVLV 76 (509)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE--EEEECCCCCCC-CEEEE
T ss_conf 778-9999999999999999997163--277999999999999999999999997478834--99734777776-70678
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf 22588999999999999999752011210023567899986302430265404331112343103431235531234332
Q gi|254780866|r 81 VDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSER 160 (499)
Q Consensus 81 iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~ 160 (499)
+|++|..+..++++++.++.+|+.++.|++.++|+.+++++..|++|++.|+|++++|++||++++++|.|+.++++++|
T Consensus 77 vD~ls~~~~ll~~~v~~~~~~ys~~~~~~~~~~f~~l~ll~~~g~~G~~lt~Dlf~lfvf~E~~~i~sy~Li~~~~~~~~ 156 (509)
T PRK12666 77 LDRLSALMLLLTALLALAALLYALAGWDRAGPHFHALFQFQLMGLNGAFLTGDLFNLFVFFEVLLAASYGLLLHGSGRAR 156 (509)
T ss_pred ECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 74766999999999999999997522344103799999999999999999968999999999999999999998498889
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC-CH---HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3210001135544556776665544321000100344321013-30---3789999854103444554000232010100
Q gi|254780866|r 161 IYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKF-PF---SIQYWMWIAFFCSFAIKIPMFPFHTWLPNAH 236 (499)
Q Consensus 161 ~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~-~~---~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y 236 (499)
.||++||++++.+|+.++++|+.++|..+||+|+.|+...... +. ........++++||++|++++|||+|+||+|
T Consensus 157 ~~Aa~kY~i~~~~gs~~~L~gi~~ly~~tGtl~~~~l~~~~~~~~~~~~~l~~~~~~ll~~gf~~K~a~fPfH~WLPday 236 (509)
T PRK12666 157 VRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAADRALLEAGAALLLVVFLLKAAMWPLNFWLPPAY 236 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999999999999999999999999983886499999997525741017999999999999999985712101002011
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC----CCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
Q ss_conf 02222344333323223332111000011122331----00000000012222212211100002443223321001354
Q gi|254780866|r 237 VQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLAS----QYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMG 312 (499)
Q Consensus 237 ~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~----~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G 312 (499)
++||+|+|++++ +++|+|+|+++|+...++++.. +.+..++.++|.+|+++|++.|++|+|+||++|||||+|+|
T Consensus 237 ~~aPtpvsalla-~~~K~Gvy~l~R~~~~~f~~~~~~~~~~~~~~l~~l~~~t~i~G~~~Al~Q~dlKrlLAYSsIsq~G 315 (509)
T PRK12666 237 AAASAPVAALFA-IMTKVGIYAILRVSTLVFGPEAGASAGFGQDWLLPGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSG 315 (509)
T ss_pred CCCCHHHHHHHH-HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 689849999999-9999999999999999814216677789999999999999999999999727698999999999999
Q ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC-CCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHH
Q ss_conf 0233310487542210234555421023330356777764200-111100235565420233201345555301024443
Q gi|254780866|r 313 YVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLH-TRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSG 391 (499)
Q Consensus 313 ~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g-~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~G 391 (499)
|++++++.+++.+..++++|++||++.|+.+|+++|.++++++ ++|.++++|+.|++|+++.+|.++.+|++|+||++|
T Consensus 316 yillgl~~~~~~~~~gal~~l~~h~~~k~~LFl~aG~i~~~~~~~~~~~~~ggl~~~~p~~a~~f~i~~lsl~GiPp~~G 395 (509)
T PRK12666 316 TLLAAIGLGTPAATAAALYYLVHSTLAAAALFLLADLVERQRGDAADRLAVTPELYGPDLLGLLFFICAIALAGLPPLSG 395 (509)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCH
T ss_conf 99999996659999999999999999999999999999966883877987079844473999999999999817875240
Q ss_pred HCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 112289999999865--999999999999999999999999972889876555687889126899999999999997724
Q gi|254780866|r 392 FIGEFLVIMSVFQNS--NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYP 469 (499)
Q Consensus 392 F~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p 469 (499)
|+|||++++++++.+ ++......+++.++..++.|++++.|+++++++ +.+|.+++|..+..+++..++.+|++|
T Consensus 396 F~sK~~i~~aa~~~~~~~~~~a~~l~~~l~tl~~~~r~~~~~Fw~~~~~~---~~~~~~~~~~~~~~~L~~~~v~~G~~~ 472 (509)
T PRK12666 396 FLGKFALLQALLNPPGAGWLWALVLLSGLAALIALTRAGIRLFWRASHER---PVPRLRVLEVAPIALLLALCVALTVFA 472 (509)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88999999998624446999999999999999999999999817899876---778876878999999999999999808
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 889999999999998520200222013679
Q gi|254780866|r 470 VPIRDTFSVPLSSIIENYTLKTGYSDSVKG 499 (499)
Q Consensus 470 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g 499 (499)
+|+.+..++++++++| +..|+++|.|
T Consensus 473 ~~~~~~~~~aa~~l~d----~~~Yi~aVl~ 498 (509)
T PRK12666 473 GPVMRYTQATAAQLHD----PAAYIQAVLA 498 (509)
T ss_pred HHHHHHHHHHHHHHHC----HHHHHHHHCC
T ss_conf 9999999999998729----2879988438
No 20
>PRK06521 hydrogenase 4 subunit B; Validated
Probab=100.00 E-value=0 Score=668.09 Aligned_cols=479 Identities=20% Similarity=0.325 Sum_probs=408.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEE
Q ss_conf 83078999999999999998720355303579999999999999999999986308888189998631348540546652
Q gi|254780866|r 2 NLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLGV 81 (499)
Q Consensus 2 ~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 81 (499)
.++++.+.+.+|+.++++.++..... +...++......+...+..........+++... ....|..+..++++++
T Consensus 3 ~~~l~~~~i~~~l~~a~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~--~~~~~~~p~~~~~~~l 77 (670)
T PRK06521 3 ALQLLLWSLLLWLALALAGLLLLRRT---RLAIRLSGPTGLLGGLLGLASALTALFAGPTVA--AVLPLGLPWLPFHLRL 77 (670)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE--EECCCCCCCCCEEEEE
T ss_conf 16899999999999999999844781---678999999999999999999998863797620--2425689987558898
Q ss_pred EHHHHHHHHHHHHHHHHHHHHHCCCCCC----HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECC-
Q ss_conf 2588999999999999999752011210----02356789998630243026540433111234310343123553123-
Q gi|254780866|r 82 DGISILLVVLTTFLTPFCILSSWKSIQE----NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWG- 156 (499)
Q Consensus 82 D~ls~~f~~l~~~i~~l~~~ys~~~~~~----~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~- 156 (499)
|++|.+|..++++++.++.+|+.+|.++ +.++|+.++.++.++|++++.|+|++++|++||++++++|.|+..++
T Consensus 78 D~LSa~fllli~~v~~~~~lYs~~Y~~~~~~~~~~~~~~~~~lf~~~m~~vv~a~dl~~f~vfwElm~l~sy~LV~~~~~ 157 (670)
T PRK06521 78 DSLSAFFLLVISLLGAAASLYSLGYGREYEGKGPGRMGFFYNLFLASMVLVLLADDAFSFLVAWEMMSLSSWFLVMANHR 157 (670)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 77789999999999999999805874106787602899999999999999999958999999999999999999984089
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 43323210001135544556776665544321000100344321013303789999854103444554000232010100
Q gi|254780866|r 157 GSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAH 236 (499)
Q Consensus 157 ~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y 236 (499)
++++.+|++||++++++|+.+++.|+.++|..+||+|+.++.+.. .+......++.++++||+.|+|++|||.|+||+|
T Consensus 158 ~~~~~~Aa~~y~i~~~~G~~~lL~g~~lly~~~Gs~~f~~~~~~~-~~~~~~~~~f~l~l~Gf~~Kagl~PfH~WLP~A~ 236 (670)
T PRK06521 158 DAENRRAGFLYLLMAHAGTLAILLAFGLLAGESGSYDFAAMRAAH-LSPFLASLVFLLALFGFGAKAGLVPLHVWLPRAH 236 (670)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC
T ss_conf 899999999999999999999999999999994791099998505-5616899999999999998737375502215777
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHH
Q ss_conf 02222344333323223332111000011122331000000000122222122111000024432233210013540233
Q gi|254780866|r 237 VQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTI 316 (499)
Q Consensus 237 ~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~ 316 (499)
.+||+|+|+++||+++|+|+|+++|+...+++....+|...+.++|.+|+++|++.|+.|+|+||++|||||+|+|||++
T Consensus 237 ~~APtpVSALlSgvmvK~GvygliR~~~~l~~~~~~~~~~~ll~lg~~t~v~G~l~Al~Q~DiKRlLAYSSIsq~G~i~l 316 (670)
T PRK06521 237 PAAPSHVSALMSGVMTKVAIYGILRVVFDLLGAPQWWWGVLVLALGAISAVLGVLYALAETDLKRLLAYSTIENIGIIFV 316 (670)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88980899999888999999999998887046348899999999999999999999998845899999988999999999
Q ss_pred HHCCC-----------CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCC
Q ss_conf 31048-----------7542210234555421023330356777764200111100235565420233201345555301
Q gi|254780866|r 317 GIFSG-----------MKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMG 385 (499)
Q Consensus 317 ~l~~~-----------~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G 385 (499)
+++.+ ...++.++++|++||+++|+++|+++|.+++++||||++|+||+.|+||+++.++.++.+|++|
T Consensus 317 glG~~~~~~~~g~~~l~~l~~~gal~H~~nHa~fK~lLFl~aG~v~~~tgtr~i~~mgGL~~~mP~t~~~flig~lai~G 396 (670)
T PRK06521 317 GLGLAMVFIAYGMPALAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISA 396 (670)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99852331001210213789999999999999999999999999999968651889589554347999999999999863
Q ss_pred CHHHHHHCCHHHHHHHHHHHH----H-------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 024443112289999999865----9-------99999999999999999999999972889876555687889126899
Q gi|254780866|r 386 LPGTSGFIGEFLVIMSVFQNS----N-------TVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCM 454 (499)
Q Consensus 386 ~Pp~~GF~~k~~i~~~~~~~~----~-------~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 454 (499)
+||++||+|||+++++.++.. + ...+...++..+++.++.|.+..+|.|++|+++.++.+|.++.|..+
T Consensus 397 lPP~~GF~Sk~li~q~~~~~~~~~~~~~~~~~~~~~~~lal~~ala~~~fvk~~g~~FlG~pR~~~~~~~~e~p~~m~~~ 476 (670)
T PRK06521 397 LPPLNGFVSEWLLFQSLLSSPGLPQWGLKLLVPLAAALLALTAALAAMCFVKFYGITFLGRPRSPKAEQAHEVPRWMRAA 476 (670)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 66425499999999999845666615899999999999999999999999999998303799987655778797435799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999772488999999999999852
Q gi|254780866|r 455 VYPIAVLTVFFGIYPVPIRDTFSVPLSSIIEN 486 (499)
Q Consensus 455 ~~~l~~~~i~lGi~p~~~~~~~~~~~~~l~~~ 486 (499)
+.+++..|+.+|++|.+..+...+.++.+...
T Consensus 477 m~iLA~~cv~~Gl~p~~~~~~l~~~~~~~~~~ 508 (670)
T PRK06521 477 MLLLAALCVLLGLLPGWVAPLIAPVAQALVGG 508 (670)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999955487798888999873144
No 21
>PRK08668 NADH dehydrogenase subunit M; Validated
Probab=100.00 E-value=0 Score=667.29 Aligned_cols=468 Identities=24% Similarity=0.407 Sum_probs=398.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEEHH
Q ss_conf 78999999999999998720355303579999999999999999999986308888189998631348540546652258
Q gi|254780866|r 5 FLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLGVDGI 84 (499)
Q Consensus 5 ~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iD~l 84 (499)
.|++++++|++++++..+.+.. + +.++...+......++..+.....+..... ..+.|. ...++.+++|.+
T Consensus 2 ~L~LiIllPLigA~l~~ll~k~---~---~~i~~~~s~~~~~~~l~l~~~~~~~~~~~~--~~~~~~-~~~~i~f~lD~l 72 (616)
T PRK08668 2 ELPLLILVPLIGSVLAWLLTKI---N---KKIGVIGNFLPLLFLIKLYPTLEVGTGEKL--TLFSNF-GGFELQLKLTHL 72 (616)
T ss_pred CHHHHHHHHHHHHHHHHHHHCH---H---HHHHHHHHHHHHHHHHHHHHHHHCCCCCEE--EEEEEC-CCCEEEEEEHHH
T ss_conf 4099999999999999998553---4---799999999999999999999855877146--764105-871278864566
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCC
Q ss_conf 89999999999999997520112--1002356789998630243026540433111234310343123553123433232
Q gi|254780866|r 85 SILLVVLTTFLTPFCILSSWKSI--QENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIY 162 (499)
Q Consensus 85 s~~f~~l~~~i~~l~~~ys~~~~--~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~ 162 (499)
|..|..++++++.++.+|+.+|+ ++++++|+.+++++..++++++.|+|++++|++||++++++|.|+.++ ++++.+
T Consensus 73 s~~f~lli~~v~~lv~lys~~Ym~~~~~~~~f~~~lll~~~~mlgvv~s~dl~~lfvfwEl~~l~sylLI~~~-~~~a~~ 151 (616)
T PRK08668 73 GWYFAIISLLVGLSVSFFMVEWLEKQKNPAAFNMFALMSLTGVLGVFFANDLITLFIFWEIAVLGSFMIVPMG-KKESRK 151 (616)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHH
T ss_conf 7999999999999999999998427998109999999999999999999389999999999999999977729-838999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC-CHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10001135544556776665544321000100344321013-3037899998541034-445540002320101000222
Q gi|254780866|r 163 AAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKF-PFSIQYWMWIAFFCSF-AIKIPMFPFHTWLPNAHVQAP 240 (499)
Q Consensus 163 aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~-~~~~~~~~~~ll~~g~-~~K~~~~PfH~WlP~~y~~ap 240 (499)
|+.||++++++|+.+++.|+.++|..+||+|++++.+.... +.........+++.++ ..|+|++|||.|+||+|++||
T Consensus 152 Aa~kyfi~~~vG~~~~L~gi~lly~~~Gt~~~~~i~~~l~~~~~~~~~~~~~l~l~~~~~~Ksa~fPfH~WLPdA~~~aP 231 (616)
T PRK08668 152 ASLKYFVLSAIGAYAMLFAIFLIYAKYGTFSFDEISQALLNDASLGFKLIVVLFLSAAGIAKSGIFPLHTWLPDAYGEAP 231 (616)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCC
T ss_conf 99999999999999999999999999786349999999851754179999999999999998462877687625206797
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHCCCCCCCC-----------CCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
Q ss_conf 234433332322333211100001112233-----------100000000012222212211100002443223321001
Q gi|254780866|r 241 TAGSVFLAGIMLKMGGYGCIRFLLPLFPLA-----------SQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIA 309 (499)
Q Consensus 241 ~~~salls~~~~k~g~~~l~r~~~~l~~~~-----------~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~ 309 (499)
+++|+++||+++|+|+|+++|+.. +++.. .+.+.+++.++|.+|+++|++.|++|+|+||++|||||+
T Consensus 232 ~~vSallsg~mvk~Gvy~lir~~~-l~~~~~~~~~~~~~~~~~~~~~ii~~lg~iT~i~gal~Al~Q~DiKrlLAYSSis 310 (616)
T PRK08668 232 QSFTAVFSGQLSKMGVYGFLLVYA-VIPTGKLFSEFGTYHGVPLFNYIIIWLGNISIIVGTLMAILQEDMKKLIAYSSIA 310 (616)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899999999999999999999999-9721276665422003257999999999999999999999860189999999999
Q ss_pred CCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHH
Q ss_conf 35402333104875422102345554210233303567777642001111002355654202332013455553010244
Q gi|254780866|r 310 HMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGT 389 (499)
Q Consensus 310 ~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~ 389 (499)
|+|||+++++.+++.|+.++++|++||+++|+++|+++|.+.+++||+|++|+||+.|+||+++.++.++.+|++|+||+
T Consensus 311 q~Gyillgig~g~~~g~~galfhli~Ha~~Ka~LFL~aG~v~~~~gt~di~~lgGL~k~mP~t~~~~~i~~lsl~GiPp~ 390 (616)
T PRK08668 311 NGGYILIGLGTGDSLGFAGGLFHVFNHALAKGLFFLSFAAVIYRTGTTKIKEMGGLIEKMPVTFAMYLVAIISLAGIPPM 390 (616)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHH
T ss_conf 99999999986659999999999999999999999999999997386639985891200589999999999998736030
Q ss_pred HHHCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 4311228999999986599-999999999999999999999997288987655568788912689999999999999772
Q gi|254780866|r 390 SGFIGEFLVIMSVFQNSNT-VAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIY 468 (499)
Q Consensus 390 ~GF~~k~~i~~~~~~~~~~-~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~ 468 (499)
+||+|||++++++++.+.+ ......+++.+++.|+.|.+..+|+|+++++. ++.+|.|+.|..|+.+++++++.+|++
T Consensus 391 ~GF~SK~~i~~a~~~~~~~~~~~~~~~~~~~t~~y~~r~~~~~F~G~~~~~~-~~~~E~p~~M~ipm~iLa~~~v~~G~~ 469 (616)
T PRK08668 391 SGFASKWLIFEALISKGMFITAFMVFFGSIGSFLYVFRPLAGVFLGQLPSKH-EDVKEAPLPMLIPMLILVLLTVVFGVA 469 (616)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHEEC
T ss_conf 4899999999999985876999999999999999999999999579997434-889999676889999999999982107
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 4889999999999998
Q gi|254780866|r 469 PVPIRDTFSVPLSSII 484 (499)
Q Consensus 469 p~~~~~~~~~~~~~l~ 484 (499)
|.+..+.++.......
T Consensus 470 P~~~~~~~~~~~~~~~ 485 (616)
T PRK08668 470 PGPVLQEINKIFGELV 485 (616)
T ss_pred CHHHHHHHHHHHHCCC
T ss_conf 7166899999874036
No 22
>PRK08375 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=663.30 Aligned_cols=472 Identities=22% Similarity=0.396 Sum_probs=413.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEE
Q ss_conf 98307899999999999999872035530357999999999999999999998630888818999863134854054665
Q gi|254780866|r 1 MNLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLG 80 (499)
Q Consensus 1 m~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (499)
||. ++.+++++|++++++..+.++. |..+..+...+...+..+.........++... .+...|.+ ..+++++
T Consensus 2 m~~-ll~l~i~iPll~a~i~~l~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~-~~gi~l~ 73 (481)
T PRK08375 2 MSH-LLILLVAVPLLAAALAALLPRS----RLRWAFALLVAALTFALSISLLPQVLSGGTIA--YNVGGWPP-GIGIELR 73 (481)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHCCC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE--EEEECCCC-CCCEEEE
T ss_conf 658-9999999999999999995884----36899999999999999999999980899659--87432566-6353887
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCC-C
Q ss_conf 22588999999999999999752011210-023567899986302430265404331112343103431235531234-3
Q gi|254780866|r 81 VDGISILLVVLTTFLTPFCILSSWKSIQE-NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGG-S 158 (499)
Q Consensus 81 iD~ls~~f~~l~~~i~~l~~~ys~~~~~~-~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~-~ 158 (499)
+|++|..+..++++++.++.+|+++|++| +.++|+.+++++.+++++++.|+|++++|++||++++++|.|+.++++ +
T Consensus 74 ~D~ls~~~~~l~~~~~~~~~~ys~~y~~~~~~~~f~~l~ll~~~~~~g~~~s~dl~~~~v~~E~~~i~s~~Li~~~~~~~ 153 (481)
T PRK08375 74 ADALSALFLLVVSIVALAALVYAIGYMGEHRQTRFYALFLLLLAGLLGAAITGDLFNLFVFLEISSLSSYALVALGGKEG 153 (481)
T ss_pred ECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 63756999999999999999997687067641579999999999999999982799999999999999999999619978
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC-C-HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 323210001135544556776665544321000100344321013-3-03789999854103444554000232010100
Q gi|254780866|r 159 ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKF-P-FSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAH 236 (499)
Q Consensus 159 ~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~-~-~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y 236 (499)
++.+|++||++++.+|+.++++|+.++|..+||+|+.++.+.... + .......+.++++|+++|+|++|||.|+||+|
T Consensus 154 ~~~~aa~ky~i~~~~g~~~ll~gi~lly~~~Gt~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WLPda~ 233 (481)
T PRK08375 154 RAGAAAYKYLILGTIGSTFLLAGVGLLYGVTGTLNMADLAGRLPPVGASRTVVAAFGFLVLGLALKAALFPLHTWLPDAY 233 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
T ss_conf 99999999999999999999999999998808841999999875076647999999999999999972522322315644
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC---CCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCH
Q ss_conf 022223443333232233321110000111223---31000000000122222122111000024432233210013540
Q gi|254780866|r 237 VQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPL---ASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGY 313 (499)
Q Consensus 237 ~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~---~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~ 313 (499)
+++|++++++++++++|+|.|+++|+..++++. ....+.+.+.++|.+|+++|++.|++|+|+||++|||||+|+||
T Consensus 234 ~~ap~~~s~lls~~~~k~g~y~l~r~~~~~~~~~~~~~~~~~~~l~~lg~~t~i~g~~~Al~Q~d~KrllAYSsis~~G~ 313 (481)
T PRK08375 234 AAAPPVVTALLSGLVTKVAVYALIRIYFTVFGVDFTFALLLGWLLAVLALVSMLVGSFAALLQDDLKRVLAYSTVSQMGY 313 (481)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 46675079999999999999999999999657525447999999999999999999999998546308999999999999
Q ss_pred HHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHC
Q ss_conf 23331048754221023455542102333035677776420011110023556542023320134555530102444311
Q gi|254780866|r 314 VTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFI 393 (499)
Q Consensus 314 i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~ 393 (499)
++++++.+++.+..++++|+++|+++|+++|+++|.+++++|++|++|+||+.|++|+++.++.++.+|++|+||++||+
T Consensus 314 i~~gi~~~~~~~~~gal~~~i~h~~~k~~LFl~~g~l~~~~g~~~i~~l~Gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~ 393 (481)
T PRK08375 314 ILLGLALLTPLALAAGLLHLLAHALMKGALFLAAGAIEETTGTRRLSDLAGLGRRMPLTAAAFAVASLSLIGVPPTVGFV 393 (481)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 99999967858799899999999999999999999998514646099853868766999999999999984253103199
Q ss_pred CHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2289999999865999-999999999999999999999972889876555687889126899999999999997724889
Q gi|254780866|r 394 GEFLVIMSVFQNSNTV-AVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPI 472 (499)
Q Consensus 394 ~k~~i~~~~~~~~~~~-~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~ 472 (499)
||++++++.++.+.+. .++.++++.+++.|++|.++++|+|+++++ .++.+|.+++|..++.++++.++.+|++|+|+
T Consensus 394 sK~~i~~~~~~~~~~~~~~~~~~~s~lt~~y~lr~~~~~f~g~~~~~-~~~~~~~~~~~~~~~~iL~~~~i~lGi~p~~~ 472 (481)
T PRK08375 394 SKWYLLVGAVEAGAWPVLAVLLASSLLALLYFLRIWYYAFFGPPPAE-REPGKEAPLTMLIPSLALALLSVLLGIFAGPL 472 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998667999999999999999999999999967999976-67888899989999999999999999849999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780866|r 473 RDTFSVPLS 481 (499)
Q Consensus 473 ~~~~~~~~~ 481 (499)
.|..+++++
T Consensus 473 ~~~~~~a~e 481 (481)
T PRK08375 473 LQVAQAAAE 481 (481)
T ss_pred HHHHHHHHC
T ss_conf 999998739
No 23
>PRK12645 monovalent cation/H+ antiporter subunit A; Reviewed
Probab=100.00 E-value=0 Score=661.33 Aligned_cols=475 Identities=25% Similarity=0.430 Sum_probs=399.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC-CCEEEEEEEE
Q ss_conf 078999999999999998720355303579999999999999999999986308888189998631348-5405466522
Q gi|254780866|r 4 PFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWID-YFCSYHLGVD 82 (499)
Q Consensus 4 p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~iD 82 (499)
|++++++++|++++++..+..+..++.+..+ .........+ ............+.+..+...|.+ .++++++++|
T Consensus 2 s~L~l~IllPfl~All~p~l~r~~~~~~~g~-~~~~~~~~~~---~~~~~~~~~~~~G~~~~~~~~Wip~lgi~~~l~lD 77 (800)
T PRK12645 2 SLLHIAILLPFIFALIIPFLYRFVKRIHTGW-FVLPVPVVLF---IYFLTLIPTTMSGNTIMKTLNWIPSLGINFTLYLD 77 (800)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH-HHHHHHHHHH---HHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEC
T ss_conf 7799999999999999999986320589999-9999999999---99999854405897699975565667855899750
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCC---HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-
Q ss_conf 588999999999999999752011210---0235678999863024302654043311123431034312355312343-
Q gi|254780866|r 83 GISILLVVLTTFLTPFCILSSWKSIQE---NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS- 158 (499)
Q Consensus 83 ~ls~~f~~l~~~i~~l~~~ys~~~~~~---~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~- 158 (499)
++|.+|..+++.++.++.+|+.+|+++ +.+|||.+++++.++|+|++.|+|++++|+|||++++++|.||++|+++
T Consensus 78 ~LS~lf~llv~~ig~lv~iYs~~Ym~~~~~~~~~F~~~lllf~~aMlGlvla~dl~~lfvfwElt~l~Sy~LI~~~~~~~ 157 (800)
T PRK12645 78 GLSLLFALLITGIGSLVVLYSIYYLSKKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYERE 157 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf 77899999999999999999588716798751189999999999999999974499999999999999999983059988
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC--CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 323210001135544556776665544321000100344321013--303789999854103444554000232010100
Q gi|254780866|r 159 ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKF--PFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAH 236 (499)
Q Consensus 159 ~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~--~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y 236 (499)
++.+++.||++++.+|+.+++.|+.++|..+||+|+.++.+..+. ..........++++|+..|+|+||||+|+||+|
T Consensus 158 ~~~~aA~k~ll~t~~G~l~lL~gi~ll~~~tGt~~~~~l~~~~~~~~~~~l~~~a~~LiliGa~~KsA~fPfH~WLP~Am 237 (800)
T PRK12645 158 ASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIQHADEIQNSPLFIPAMILILLGAFTKSAQFPFYIWLPDAM 237 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC
T ss_conf 99999999987777778999999999999978941999997321013570999999999999999836266613145513
Q ss_pred CCCCCCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHH
Q ss_conf 02222344333-32322333211100001112233100000000012222212211100002443223321001354023
Q gi|254780866|r 237 VQAPTAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVT 315 (499)
Q Consensus 237 ~~ap~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~ 315 (499)
+||+|+|+++ |++++|+|+|+++|+. +.++. .+.|.+.+..+|.+|+++|++.|++|+|+||++|||||||+|||.
T Consensus 238 -~APTPVSA~Lhsa~mVKaGvYll~R~~-~~f~~-~~~~~~~l~~~G~iT~l~Ga~~Al~Q~DlKrlLAYSTVSqlG~i~ 314 (800)
T PRK12645 238 -EAPTPVSAYLHSATMVKAGIYLVARFT-PIFAG-SQVWFWTVTLVGLITLFWGSLNATKQTDLKGILAFSTVSQLGMIM 314 (800)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -589569999999999999999999998-86424-599999999999999999999999664489999999999999999
Q ss_pred HHHCCCC-------------CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 3310487-------------542210234555421023330356777764200111100235565420233201345555
Q gi|254780866|r 316 IGIFSGM-------------KSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMA 382 (499)
Q Consensus 316 ~~l~~~~-------------~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~ls 382 (499)
.++|.++ +.++.++++|++||+++|+.+|+++|.+++++||||++|++|+.|+||+++.++.++.+|
T Consensus 315 ~~lGiG~~~~~~~~~~~~~~~la~~aal~hl~~HalfKa~LFl~aG~I~~~tGtrdi~~LgGL~r~mP~ta~~~~iaalS 394 (800)
T PRK12645 315 SLLGIGAASLHYQGDDSKIYAAAFTAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLGGLMTIMPITFTIAVIGALS 394 (800)
T ss_pred HHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHCCHHHHHHHHHHHHH
T ss_conf 99844604431111011346679999999999999999999997749999807651988199041050999999999999
Q ss_pred HCCCHHHHHHCCHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCCCC
Q ss_conf 301024443112289999999865-----------9999999999999999999999999728898765-5568788912
Q gi|254780866|r 383 NMGLPGTSGFIGEFLVIMSVFQNS-----------NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEK-VQQLKDLSLR 450 (499)
Q Consensus 383 l~G~Pp~~GF~~k~~i~~~~~~~~-----------~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~-~~~~~~~~~~ 450 (499)
++|+||++||+||++++++.++.. ......+.+++.++..|+.|.+.+.|+|++++++ +++.+|.++.
T Consensus 395 maGiPp~~GF~SKe~~~~a~l~~~~~~~~~~~~~~~~~~~~a~~~s~lt~ay~~r~~~~~F~G~~~~~~~~~~~he~p~~ 474 (800)
T PRK12645 395 MAGLPPFNGFLSKEMFFESMLNATQANLFSLDTWGYLFPIIAWVASVFTFVYSIIFIFKTFFGKYKPEQLPKKAHEAPIG 474 (800)
T ss_pred HCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
T ss_conf 83786300488889999999860134312200289999999999999999999999999307999876589988999804
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68999999999999977248899999999999985
Q gi|254780866|r 451 ERCMVYPIAVLTVFFGIYPVPIRDTFSVPLSSIIE 485 (499)
Q Consensus 451 ~~~~~~~l~~~~i~lGi~p~~~~~~~~~~~~~l~~ 485 (499)
+..+..+++.+++.+|++|+.+.+....++.+...
T Consensus 475 m~~~~~~la~~~l~~g~~p~~~~~~~~~pa~~a~~ 509 (800)
T PRK12645 475 MLISPIILASLVVVFGLFPNILTNSIIEPAVAAIL 509 (800)
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 87779999999999980714444566899999863
No 24
>PRK12649 putative monovalent cation/H+ antiporter subunit A; Reviewed
Probab=100.00 E-value=0 Score=659.46 Aligned_cols=477 Identities=24% Similarity=0.360 Sum_probs=401.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC-CCEEEEEEE
Q ss_conf 3078999999999999998720355303579999999999999999999986308888189998631348-540546652
Q gi|254780866|r 3 LPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWID-YFCSYHLGV 81 (499)
Q Consensus 3 ~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~i 81 (499)
++.+++.+++|++++.+..+.++..+++ ..+ +........++........ ...+.+..+.+.|+| .++++++++
T Consensus 4 ~~~L~l~I~lPfi~A~l~pll~r~~~~~-~~w-~~~~~~l~~~~~~~~~~~~---~~~G~~~~~~~~Wip~~gi~~~~~~ 78 (800)
T PRK12649 4 FNAITIAIFLPFIFAGLLPVLEKLFKQR-IGW-FAAAIAFACFALIAMAAPE---TIAGQIIQGSFSWIPAAGLNFDFYA 78 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHH---HCCCCEEEEEECCCCCCCCEEEEEE
T ss_conf 5679999999999999999998741067-899-9999999999999999888---5079768987411577885589864
Q ss_pred EHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-
Q ss_conf 258899999999999999975201121--00235678999863024302654043311123431034312355312343-
Q gi|254780866|r 82 DGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS- 158 (499)
Q Consensus 82 D~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~- 158 (499)
|++|..|..+++.++.++.+|+.+|++ ++.+|||.+++++.++|+|++.|+|++++|+|||++++++|.||++|+++
T Consensus 79 DgLs~l~~lli~~Ig~lv~lYs~~Ym~~~~~~~rFy~~lllf~~aMlGlvla~dl~~lfvFWEl~~l~SylLIg~~~~~~ 158 (800)
T PRK12649 79 DGLATLIAFIASGIGVIIMSYSNGYMSRKEDLPRYYQWLLLFMGAMIGIAFSDNTIQLFIFWELTSITSFMLIGYWREKP 158 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 27789999999999999999958972899981479999999999999999982599999999999999999988509888
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC-----CHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 323210001135544556776665544321000100344321013-----303789999854103444554000232010
Q gi|254780866|r 159 ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKF-----PFSIQYWMWIAFFCSFAIKIPMFPFHTWLP 233 (499)
Q Consensus 159 ~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~-----~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP 233 (499)
++.+++.||++++.+|+.+++.|+.++|..+||+|+.++.+..+. ..........++++|+..|+|+||||+|+|
T Consensus 159 ~a~~aA~k~~l~t~~G~l~lL~gi~ll~~~tGt~~~~~i~~~~~~~~~~~~~~l~~~~~~LiliG~~~KsAqfPfH~WLP 238 (800)
T PRK12649 159 ESIYGATKAFLITAGGGLAMFAGFLLLGNITGSFEIAAIANDPELINAIHEHELFLATLILIFIGAAAKSAQGPFYIWLP 238 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHC
T ss_conf 99999999999999999999999999999985758999984266652124551999999999999998845155623211
Q ss_pred CCCCCCCCCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
Q ss_conf 10002222344333-32322333211100001112233100000000012222212211100002443223321001354
Q gi|254780866|r 234 NAHVQAPTAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMG 312 (499)
Q Consensus 234 ~~y~~ap~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G 312 (499)
|+| +||+|+|+++ |++++|+|+|.+.|+. +.+. ..+.|...+..+|.+|+++|++.|++|+|+||++|||||||+|
T Consensus 239 dAm-~APTPVSA~Lhsa~mVKaGvyll~R~~-p~~~-~~~~~~~~l~~~G~iT~l~ga~~Al~Q~DlKrlLAYSTVSqlG 315 (800)
T PRK12649 239 NAM-EAPTPVSAFLHSATMVKAGIYLVARIH-PIFS-GTEAWFILVSGTGIITMLMAGFLAFRQTDIKAILAYSTISQLA 315 (800)
T ss_pred HHC-CCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 020-488639999999999999999999998-9884-0399999999999999999999998355589999998899999
Q ss_pred HHHHHHCCCCCC----CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHH
Q ss_conf 023331048754----2210234555421023330356777764200111100235565420233201345555301024
Q gi|254780866|r 313 YVTIGIFSGMKS----GVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPG 388 (499)
Q Consensus 313 ~i~~~l~~~~~~----~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp 388 (499)
||+++++.+++. ++.++++|++||+++|+.||+++|.+.+++||||++|++|+.|+||+++.++.++.+|++|+||
T Consensus 316 ~i~~~~G~gt~~~~~~~~~aa~~hl~~HalfKa~LFl~aG~i~~~tgtrdi~~lgGL~r~MP~T~~~~~iaalsmaGvPp 395 (800)
T PRK12649 316 YLMTMYGYSTAEEPGIGFAAATFHLLNHAAFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIIACIAAAAMAGIPP 395 (800)
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCC
T ss_conf 99999973773214579999999999989999999997759999807511888489421267999999999999807862
Q ss_pred HHHHCCHHHHHHHHHHHH---------H---HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCCCCCCHHHH
Q ss_conf 443112289999999865---------9---999999999999999999999999728898765--55687889126899
Q gi|254780866|r 389 TSGFIGEFLVIMSVFQNS---------N---TVAVLASFGVVLSALYSLWLYRKVVFGVSKCEK--VQQLKDLSLRERCM 454 (499)
Q Consensus 389 ~~GF~~k~~i~~~~~~~~---------~---~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~ 454 (499)
++||+||++++++..+.+ . .....+.+++.+++.|+.|.+...|+|++++++ .++.+|.|+.+..|
T Consensus 396 ~~GF~sKe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~lt~~y~~r~~~~~F~g~~~~~~~~~~~~~e~p~~m~~p 475 (800)
T PRK12649 396 LNGFLSKEMFYESSIEIGALISETYGGIFAFIFPAFAVAGGVFTFAYSIKLIDGIFLGERDHDHAIPHHIHEAPMTMLAP 475 (800)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 10788579999999874234432024449999999999999999999999999821799999877877867787224578
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 999999999997724889999999999998520
Q gi|254780866|r 455 VYPIAVLTVFFGIYPVPIRDTFSVPLSSIIENY 487 (499)
Q Consensus 455 ~~~l~~~~i~lGi~p~~~~~~~~~~~~~l~~~~ 487 (499)
..+++++++.+|++|+...+....++.+.....
T Consensus 476 ~~iLa~~~~~~g~~p~~~~~~l~~~a~~~~~~~ 508 (800)
T PRK12649 476 AAFLAFLIIFFGLIPSFPIHVIIEPAVSGILLE 508 (800)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
T ss_conf 999999999999553023567789999852367
No 25
>PRK12648 putative monovalent cation/H+ antiporter subunit A; Reviewed
Probab=100.00 E-value=0 Score=653.52 Aligned_cols=471 Identities=22% Similarity=0.363 Sum_probs=402.9
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC-CCEEEEEEEEHH
Q ss_conf 8999999999999998720355303579999999999999999999986308888189998631348-540546652258
Q gi|254780866|r 6 LSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWID-YFCSYHLGVDGI 84 (499)
Q Consensus 6 l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~iD~l 84 (499)
+.+++++|++++++..+.++.. ++....++.......++...........++. ..+...|.| ..+++.+++|++
T Consensus 3 L~llvllP~igA~l~~ll~r~~--r~~~~~~a~l~~l~~~~~~~~l~~~v~~g~~---~~~~~~WiP~lgi~l~~~lDgL 77 (950)
T PRK12648 3 LLLLVLLPFLGALLAALLPRNA--RNAEAWLAGLVALAALVLLALLYPAVAAGEV---IRQSIEWLPALGLNLSLRLDGL 77 (950)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE---EEEEECCCCCCCCEEEEEEHHH
T ss_conf 7999999999999999987304--4389999999999999999999998607982---8997433566686588853287
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-CCC
Q ss_conf 899999999999999975201121--00235678999863024302654043311123431034312355312343-323
Q gi|254780866|r 85 SILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS-ERI 161 (499)
Q Consensus 85 s~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~-~~~ 161 (499)
|..|..+++.++.++.+|+..|++ ++.+|||.+++++.++|+|+++|+|++++|+|||++++++|.||++|+++ +++
T Consensus 78 s~lf~lLv~~ig~lv~lYs~~Ym~~~~~~~rFy~~lllf~~amlGvvla~DL~~lfVFwEltsl~SylLIg~~~~~~~ar 157 (950)
T PRK12648 78 AWLFALLILGIGLLVVLYARYYLSPADPVPRFFAFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADAR 157 (950)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 99999999999999999967864899880479999999999999999980799999999999999999997428988999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC--CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 210001135544556776665544321000100344321013--303789999854103444554000232010100022
Q gi|254780866|r 162 YAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKF--PFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQA 239 (499)
Q Consensus 162 ~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~--~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~a 239 (499)
+++.||++++..|+..++.|+.++|..+||+|++++.+..+. +.+.......++++|+..|+|+||||+|+||+| +|
T Consensus 158 ~aA~~al~vt~~Ggl~lL~Gi~ll~~~~Gt~~ls~i~~~~~~~~~~~l~~~a~~Lil~Ga~~KsA~fPfH~WLPdAm-aA 236 (950)
T PRK12648 158 RGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVLAAGDLIRAHPLYPPALVLILLGAFTKSAQFPFHFWLPHAM-AA 236 (950)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH-CC
T ss_conf 99999999999999999999999999978750999984110023572899999999999999844165465544453-58
Q ss_pred CCCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 22344333-32322333211100001112233100000000012222212211100002443223321001354023331
Q gi|254780866|r 240 PTAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGI 318 (499)
Q Consensus 240 p~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l 318 (499)
|+|+|+++ |++++|+|+|+++|+. +.+.. .+.|.+.+..+|.+|+++|++.|++|+|+||++|||||||+|||.+++
T Consensus 237 PTPVSA~LhSa~mVKaGvyll~Rl~-p~l~~-~~~w~~~l~~lG~iT~l~Ga~~Al~Q~DlKrlLAYSTVSqlG~i~~~i 314 (950)
T PRK12648 237 PTPVSAYLHSATMVKAGVFLLARLW-PVLAG-TEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLL 314 (950)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH-HHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8569899999999999999999999-88623-499999999999999999999999500499999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHH
Q ss_conf 04875422102345554210233303567777642001111002355654202332013455553010244431122899
Q gi|254780866|r 319 FSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLV 398 (499)
Q Consensus 319 ~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i 398 (499)
+.+++.+..++++|++||+++|+.+|+++|.+++++||||++|++|++|+||+++.++.++.+|++|+||++||+||.++
T Consensus 315 Glgt~~a~~aal~hli~Hal~Ka~LFl~aG~I~~~tGtrdl~~LgGL~r~mP~ta~~~~iaalSmaGiPp~~GF~sKe~~ 394 (950)
T PRK12648 315 GLGSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMF 394 (950)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 73668899999999999999999999998699998087009871991421289999999999998425520379999999
Q ss_pred HHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999998659------99999999999999999999999972889876555687889126899999999999997724889
Q gi|254780866|r 399 IMSVFQNSN------TVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPI 472 (499)
Q Consensus 399 ~~~~~~~~~------~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~ 472 (499)
+++..+.+. .....+.+++.++..|+.|.+...|+|+++++.+++.+|.+..+..|..+++.+++.+|++|.+.
T Consensus 395 ~~a~~~~~~~~~~~~~~~~~a~~~s~lt~aYs~r~~~~~F~g~~~~~~~~~~he~p~~m~~p~~iLa~~~l~~G~~p~~~ 474 (950)
T PRK12648 395 FAETLETHLLGSLDWLLPVAATLAGIFSVAYSLRFIHDVFFGPPPDDLPKTPHEPPRWMRAPVELLVLLCLVVGIFPALT 474 (950)
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 99998655642199999999999999999999999997046999987787889997047666999999999986061422
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999998
Q gi|254780866|r 473 RDTFSVPLSSII 484 (499)
Q Consensus 473 ~~~~~~~~~~l~ 484 (499)
.+....++.+..
T Consensus 475 ~~~~~~~a~~~~ 486 (950)
T PRK12648 475 VGPLLAAAARAV 486 (950)
T ss_pred HHHHHHHHHHHH
T ss_conf 466799999854
No 26
>PRK06590 NADH dehydrogenase subunit L; Reviewed
Probab=100.00 E-value=0 Score=646.37 Aligned_cols=463 Identities=24% Similarity=0.392 Sum_probs=404.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC---CCEEEEEEE
Q ss_conf 78999999999999998720355303579999999999999999999986308888189998631348---540546652
Q gi|254780866|r 5 FLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWID---YFCSYHLGV 81 (499)
Q Consensus 5 ~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~i 81 (499)
++.+++++|++++++..+.+.. .++|..+.++.....+.++++...+..+.......+..+.++|++ ...++++.+
T Consensus 4 ll~lii~~Pl~ga~i~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~~~~ 82 (619)
T PRK06590 4 LLWLIVLLPLIGFLILGLFGGR-IGEKGAHLVGTGSVGLSALLSLVVFFDFRALGGQAFNQTLWTWISVGDFDVDFGLRV 82 (619)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECEECCCCCEEEEEEE
T ss_conf 9999999999999999997512-333899999999999999999999999846799627997540434177471688864
Q ss_pred EHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECC-CC
Q ss_conf 258899999999999999975201121--002356789998630243026540433111234310343123553123-43
Q gi|254780866|r 82 DGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWG-GS 158 (499)
Q Consensus 82 D~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~-~~ 158 (499)
|++|..+..+++.++.++.+||.+|++ ++.+||+.+++++.++|.+++.|+|++++|++||++++++|.||++|+ ++
T Consensus 83 D~ls~~~~~~~~~i~~~v~~ys~~ym~~~~~~~rf~~~l~lf~~~ml~~v~a~nl~~~~v~wE~~~l~sy~LI~~~~~~~ 162 (619)
T PRK06590 83 DGLSATMLVVVTGVSFLVHIYSIGYMAGDPGYSRFFAYLSLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKP 162 (619)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 08789999999999999999968981799865079999999999999999972299999999999999999998745786
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC--HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3232100011355445567766655443210001003443210133--03789999854103444554000232010100
Q gi|254780866|r 159 ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFP--FSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAH 236 (499)
Q Consensus 159 ~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~--~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y 236 (499)
++.+|+.||++++++|+.++++|+..+|..+||+|++++....+.. .....+...++++|+..|+|++|||.|+||+|
T Consensus 163 ~~~~aa~k~~i~~~~g~~~~l~gi~~l~~~~gt~~~~~i~~~~~~~~~~~~~~~~~~~l~~g~~~Ksa~~P~h~WLpda~ 242 (619)
T PRK06590 163 SANAAAMKAFVVNRVGDFGLALGIFLLFAEFGSLNYDEVFAAAPELLGNSALTLICLLLFIGAMGKSAQFPLHTWLPDAM 242 (619)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf 88999999999984769999999999999958986999998745234613999999999999999866076514346662
Q ss_pred CCCCCCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHH
Q ss_conf 02222344333-32322333211100001112233100000000012222212211100002443223321001354023
Q gi|254780866|r 237 VQAPTAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVT 315 (499)
Q Consensus 237 ~~ap~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~ 315 (499)
|+|+|+||++ +++++|+|+|.++|+. +++. ..+.+...+.++|.+|+++|++.|+.|+|+||++||||++|+|||+
T Consensus 243 -~aPtpvSAllha~~~v~aGvy~~~r~~-~~~~-~~~~~~~~i~~~g~~t~~~g~~~al~Q~d~KrllAYStisq~G~m~ 319 (619)
T PRK06590 243 -EGPTPVSALIHAATMVTAGVYLVARMS-PLFE-LSPEALHFVTIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMF 319 (619)
T ss_pred -CCCCCHHHHHHHHHHHHHHHHEEHHHC-CCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -489846788728999998863110304-4511-2789999999999999999999999650268888977988999999
Q ss_pred HHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH-HCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCC
Q ss_conf 33104875422102345554210233303567777642-00111100235565420233201345555301024443112
Q gi|254780866|r 316 IGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDR-LHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIG 394 (499)
Q Consensus 316 ~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~-~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~ 394 (499)
++++.+ ++.++++|+++|+++|+.+|+++|.+.++ .||+|++|+||+.|+||+++.++.++.+|++|+||++||+|
T Consensus 320 ~~~g~~---~~~~a~~h~~~Ha~~Ka~LFl~aG~vi~~~~~~~~~~~~gGl~~~mP~t~~~~~i~~lsl~G~Pp~~GF~s 396 (619)
T PRK06590 320 LALGVG---AYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGLPPFAGFFS 396 (619)
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 999987---88999999999999999999988899987432001876289400078999999999998614402206978
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2899999998659-999999999999999999999999728898765556878891268999999999999977248899
Q gi|254780866|r 395 EFLVIMSVFQNSN-TVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIR 473 (499)
Q Consensus 395 k~~i~~~~~~~~~-~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~ 473 (499)
|+.+++++++.+. +..++..++..+++.|..|.+..+|+|++|.++.++.+|.++.|..|+.+++++++..|..+....
T Consensus 397 K~~i~~~~~~~~~~~~~~~~~~~~~~t~~y~~r~~~~~f~g~~r~~~~~~~HE~p~~M~~PLvILAilsi~~G~l~~~~~ 476 (619)
T PRK06590 397 KDEILEAAFANGHGFLFVAGLVGAFLTAFYSFRLIFLVFHGKERWHVDHHPHESPGVMTLPLIVLAVLSVFAGALLIPFI 476 (619)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999870573999999999999999999999997078999877667788862599989999999999999998744
Q ss_pred H
Q ss_conf 9
Q gi|254780866|r 474 D 474 (499)
Q Consensus 474 ~ 474 (499)
+
T Consensus 477 ~ 477 (619)
T PRK06590 477 V 477 (619)
T ss_pred H
T ss_conf 3
No 27
>PRK12647 putative monovalent cation/H+ antiporter subunit A; Reviewed
Probab=100.00 E-value=0 Score=651.33 Aligned_cols=426 Identities=23% Similarity=0.369 Sum_probs=379.5
Q ss_pred CCEEEEEEEEECCC-CCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 88189998631348-540546652258899999999999999975201121--002356789998630243026540433
Q gi|254780866|r 59 RSSFQMIEYYHWID-YFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDML 135 (499)
Q Consensus 59 ~~~~~~~~~~~~~~-~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~ 135 (499)
..+....+.++|+| .++++++++|++|.+|..+++.++.++.+|+.+|++ ++.+|||.+++++.++|+|++.|+|++
T Consensus 39 ~~G~~~~~~~~Wip~lgi~~~~~lDgLS~lf~llv~~ig~lv~~Ys~~Ym~~~~~~~rFy~~lllf~~aMlGlvla~dl~ 118 (761)
T PRK12647 39 AAGETVREGYAWVPSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPHLGRFYGYILLFMASMLGLVLSDNLI 118 (761)
T ss_pred CCCCEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 07986999863325689759995058689999999999999999978973899980389999999999999999983799
Q ss_pred CHHHHHHHCCCCCEEEEEECCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC--CHHHHHHHH
Q ss_conf 1112343103431235531234-3323210001135544556776665544321000100344321013--303789999
Q gi|254780866|r 136 LFYIFFEASLIPMFVIIGVWGG-SERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKF--PFSIQYWMW 212 (499)
Q Consensus 136 ~l~v~~El~~l~~~~Li~~~~~-~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~--~~~~~~~~~ 212 (499)
++|+|||++++++|.||+++++ +++.++++||++++.+|+..++.|+.++|..+||+|++++.+..+. +........
T Consensus 119 ~lfvfWEl~~l~SylLIg~~~~~~~a~~AA~k~ll~t~~G~l~lL~gi~ll~~~tGt~~~~~l~~~~~~~~~~~l~~~~~ 198 (761)
T PRK12647 119 TLFVFWELTSISSFLLIGFNHERAAARKAALQALLVTGGGGLALLAGLILLGNVTGTYSISELLSMGDVIREHPLYLAIL 198 (761)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 99999999999999998123997899999999999999999999999999999977766999997356531573899999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
Q ss_conf 85410344455400023201010002222344333-32322333211100001112233100000000012222212211
Q gi|254780866|r 213 IAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASL 291 (499)
Q Consensus 213 ~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l 291 (499)
.++++|+..|+++||||+|+||+| +||+|+|+++ |++++|+|+|+++|+. +.+.. .+.|.+.+.++|.+|+++|++
T Consensus 199 ~Liliga~~KsAqfPfH~WLPdAm-~APTPVSA~LhSa~mVKaGvYll~R~~-p~~~~-~~~~~~~l~~lG~~T~l~Gal 275 (761)
T PRK12647 199 LLVLGGAFTKSAQFPFHFWLPNAM-EAPTPVSAYLHSATMVKAGIYLLARLN-PVLGG-TALWQVILPLFGGLTMLAGAL 275 (761)
T ss_pred HHHHHHHHHHHCCCCCHHHCCHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHCC-CHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999998832055433050221-489728899999999999999999997-87513-599999999999999999999
Q ss_pred CCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHC
Q ss_conf 10000244322332100135402333104875422102345554210233303567777642001111002355654202
Q gi|254780866|r 292 VSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPR 371 (499)
Q Consensus 292 ~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~ 371 (499)
.|++|+|+||++|||||+|+||++++++.+++.++.++++|++||+++|+.+|+++|.+++++||||++|++|+.|+||+
T Consensus 276 ~Al~Q~DlKrlLAYSTVSqlG~i~l~lGlgt~~a~~aal~hl~~HalfKa~LFl~aG~i~~~tgtrdi~~LgGL~r~mP~ 355 (761)
T PRK12647 276 LAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPI 355 (761)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHCHH
T ss_conf 99863028899999999999999999876778999999999999999999999999999999489607775785630659
Q ss_pred CCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 332013455553010244431122899999998659---99999999999999999999999972889876555687889
Q gi|254780866|r 372 YAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSN---TVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLS 448 (499)
Q Consensus 372 ~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~---~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~ 448 (499)
++.++.++.+|++|+||++||+||++++++..+.+. ++...+.+++.++..|.+|.+.+.|+|+++++ .++.+|.|
T Consensus 356 T~~~~~iaalsmaGlPp~~GF~SKe~~~~a~~~~~~~~~~~~~~~~~~s~lt~ay~~~~~~~~F~g~~~~~-~~~~~e~p 434 (761)
T PRK12647 356 TAAAALLAALSMAGLPPLFGFIGKELLYEALLEAPLWSLFLTVAAVLANALMVAVAFLVGLRPFLGKLVET-PKHPHEAP 434 (761)
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCC
T ss_conf 99999999999817852014989999999986277505899999999999999999999999732899888-88989897
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 1268999999999999977248899999999999985202
Q gi|254780866|r 449 LRERCMVYPIAVLTVFFGIYPVPIRDTFSVPLSSIIENYT 488 (499)
Q Consensus 449 ~~~~~~~~~l~~~~i~lGi~p~~~~~~~~~~~~~l~~~~~ 488 (499)
+.+..|..+++++++.+|++|.+..+.+..++.+.....+
T Consensus 435 ~~m~~p~~iLa~~~~~~g~~p~~~~~~l~~~a~~~~~~~~ 474 (761)
T PRK12647 435 VLMWLGPAVLAVLGLLFGLFPFFFHAALLSPAASAVLGEP 474 (761)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
T ss_conf 1676889999999999980715336778999998523788
No 28
>PRK06525 hydrogenase 4 subunit D; Validated
Probab=100.00 E-value=0 Score=646.83 Aligned_cols=461 Identities=22% Similarity=0.352 Sum_probs=393.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEE
Q ss_conf 98307899999999999999872035530357999999999999999999998630888818999863134854054665
Q gi|254780866|r 1 MNLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLG 80 (499)
Q Consensus 1 m~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (499)
|+. ++.+++++|++++++..+.+.. +++. ........+..........+..+.........+.|.+.. .++++
T Consensus 1 M~~-L~ll~illPll~a~l~~~l~~~--~~~~---~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 73 (480)
T PRK06525 1 MEN-LALLTLLLPFIGALVVSFLPGR--RAAE---LGVLFAALATLCMLVLISAFYQAGKVAVTLTLVNVGDVA-LFGLV 73 (480)
T ss_pred CCH-HHHHHHHHHHHHHHHHHHHHHH--HHHH---HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC-CEEEE
T ss_conf 956-9999999999999999998436--8999---999999999999999999998489851788753035665-22567
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHCCCCCC---------HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEE
Q ss_conf 22588999999999999999752011210---------023567899986302430265404331112343103431235
Q gi|254780866|r 81 VDGISILLVVLTTFLTPFCILSSWKSIQE---------NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVI 151 (499)
Q Consensus 81 iD~ls~~f~~l~~~i~~l~~~ys~~~~~~---------~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~L 151 (499)
+|++|..+..++++++.++.+|+.+|.++ +.+||+.+++++..++++++.|+|++++|++||++++++|.|
T Consensus 74 ~D~ls~~~~~l~~~~~~l~~lys~~y~~~~~~~~~~~~~~~~f~~~~ll~~~~~~g~~~s~dl~~~fvf~E~~~i~sy~L 153 (480)
T PRK06525 74 IDPVSVLILFVVVFLGLLVTIYSTGYMSPKNREHPVHEGTNRYYAFLLLFIGAMAGLVLSSTLLGLLLFFEITGLCSWAL 153 (480)
T ss_pred ECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 75767999999999999999999997122233365765441899999999999999999807999999999999999999
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 53123433232100011355445567766655443210001003443210133037899998541034445540002320
Q gi|254780866|r 152 IGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTW 231 (499)
Q Consensus 152 i~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~W 231 (499)
+++++++++.||++||++++.+|+.++++|+.++|..+||+|+.++.+. +...+...+.++++++..|+|++|||.|
T Consensus 154 i~~~~~~~~~~aa~ky~i~~~~gs~~~l~gi~~ly~~~gt~~~~~l~~~---~~~~~~~~~~~~l~~~~~K~~~~P~H~W 230 (480)
T PRK06525 154 ISYYQSDKAQRSALKALLITHIGSLGLYLAAATLFLQTGSFALSALSGL---HGDLKLLVFGGILFAAWGKSAQLPLQAW 230 (480)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9375878999999999999999999999999999986887389998715---7248999999999999999715457344
Q ss_pred CCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
Q ss_conf 10100022223443333-23223332111000011122331000000000122222122111000024432233210013
Q gi|254780866|r 232 LPNAHVQAPTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAH 310 (499)
Q Consensus 232 lP~~y~~ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~ 310 (499)
+||+| ++|+|+|++++ +..+|+|.|+++|+.....+ ..+.+.+.+.++|++|+++|++.|++|+|+||++|||||+|
T Consensus 231 LPda~-~ap~pvsa~L~~~~~~k~g~y~l~r~~~~~~~-~~~~~~~~l~~lg~~t~~~g~~~Al~Q~d~KrlLAYSSisq 308 (480)
T PRK06525 231 LPDAM-EAPTPVSAYLHAASMVKVGVYIFARAILDGGN-IPHVIGYVGMVMAIVTMLYGFLMYLPQQDMKRLLAYSTITQ 308 (480)
T ss_pred CCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 77534-68975888999999999999999999997331-49999999999999999999999998521106788869999
Q ss_pred CCHHHHHHCCC---CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCH
Q ss_conf 54023331048---754221023455542102333035677776420011110023556542023320134555530102
Q gi|254780866|r 311 MGYVTIGIFSG---MKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLP 387 (499)
Q Consensus 311 ~G~i~~~l~~~---~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~P 387 (499)
+||++++++.+ ++.+..|+++|++||+++|+++|+++|.+++++|+||++|++|+.|++|+++.++.++.+|++|+|
T Consensus 309 ~G~i~~gi~~~~~g~~~~~~g~l~~~i~H~~~k~~LFl~aG~i~~~~gt~~i~~l~Gl~~~~P~~a~~f~i~~lsl~GiP 388 (480)
T PRK06525 309 LGYMFFGLSLSIFGSRLALEGSIAHIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKMPLVGVGFCVAALAITGVP 388 (480)
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999971356589999999999999999999999998999870897378865998873999999999999998877
Q ss_pred HHHHHCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 44431122899999998659------999999999999999999999999728898765556878891268999999999
Q gi|254780866|r 388 GTSGFIGEFLVIMSVFQNSN------TVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVL 461 (499)
Q Consensus 388 p~~GF~~k~~i~~~~~~~~~------~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 461 (499)
|++||+||++++++++|.+. ...+++.++++++..|++|.++++|+|++++ +.++.+|.++.|+.|+.+++++
T Consensus 389 p~~GF~sK~~i~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~y~~~~~~~~f~g~~~~-~~~~~~~~~~~m~~~~~~L~~l 467 (480)
T PRK06525 389 PFNGFFSKFPIFAGGFELSVEYWILLPAMILLLIESVASFAWFLRWFGRVVFGEPSE-AVADAAPLPLSMKLVLIVLIVM 467 (480)
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCHHHHHHHHHHHHH
T ss_conf 762899999999999985761599999999999999999999999999994899973-3477899988799999999999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999772488999
Q gi|254780866|r 462 TVFFGIYPVPIRD 474 (499)
Q Consensus 462 ~i~lGi~p~~~~~ 474 (499)
++.+|++|.|+++
T Consensus 468 ~i~~Gv~p~P~l~ 480 (480)
T PRK06525 468 SLISSVIAAPWLQ 480 (480)
T ss_pred HHHHHHHCCCCCC
T ss_conf 9999981531039
No 29
>PRK06458 hydrogenase 4 subunit F; Validated
Probab=100.00 E-value=0 Score=646.87 Aligned_cols=467 Identities=25% Similarity=0.411 Sum_probs=406.0
Q ss_pred CCC-CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEE
Q ss_conf 983-0789999999999999987203553035799999999999999999999863088881899986313485405466
Q gi|254780866|r 1 MNL-PFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHL 79 (499)
Q Consensus 1 m~~-p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (499)
||. .++++++++|++++++..+.+. +|..+.+....+...++.+...+.....++.... .+..+
T Consensus 1 m~~~~ll~llvliPli~all~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----------~~~~~ 65 (491)
T PRK06458 1 MSYSILLALLLLIPLLASLLLFACRK----RRLAARLNVLGITLTLILALWLVQTVVDAGEIFA-----------AGLWF 65 (491)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE-----------CCEEE
T ss_conf 98669999999999999999999378----5289999999999999999999999825786000-----------24034
Q ss_pred EEEHHHHHHHHHHHHHHHHHHHHHCCCCCC----------HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCE
Q ss_conf 522588999999999999999752011210----------0235678999863024302654043311123431034312
Q gi|254780866|r 80 GVDGISILLVVLTTFLTPFCILSSWKSIQE----------NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMF 149 (499)
Q Consensus 80 ~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~----------~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~ 149 (499)
.+|++|..+..++++++.++.+|+.+++++ +.++|+.+++++..++++++.|+|++++|++||++++++|
T Consensus 66 ~~D~ls~~~~~l~~~i~~~~~lys~~y~~~~~~~~~~~~~~~~~y~~l~ll~~~g~~g~~~s~dl~~~~vf~El~~i~sy 145 (491)
T PRK06458 66 HVDDLNVLFLALTGFVGFLTSLYSIGYMRHEVEHGELSPVRLRLYYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSV 145 (491)
T ss_pred EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 45176799999999999999999889986403103334214769999999999999999998189999999999999999
Q ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH---------HCCCHHHHHHHHHHHHCCCC
Q ss_conf 355312343323210001135544556776665544321000100344321---------01330378999985410344
Q gi|254780866|r 150 VIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAM---------SKFPFSIQYWMWIAFFCSFA 220 (499)
Q Consensus 150 ~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~---------~~~~~~~~~~~~~ll~~g~~ 220 (499)
.|+++++++++.||++||++++.+|+.++++|+..+|..+|+.+.++.... .+.+.....+.+.++++|++
T Consensus 146 ~Li~~~~~~~~~~Aa~ky~i~~~~gs~~~L~gi~~ly~~~gtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~l~g~~ 225 (491)
T PRK06458 146 LLVGIYRTRASLEAAWKYFILCSVGIAFALFGTILVYAAAATVMGDGEDAMLWTVLLAVASLLDPTLMSLAFVFLLIGFG 225 (491)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 99996796899999999999999999999999999999999886205788888889876322453799999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC-CCCCCCCHHHCCCCCCCCCCCCCCCEECCC
Q ss_conf 4554000232010100022223443333232233321110000111223-310000000001222221221110000244
Q gi|254780866|r 221 IKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPL-ASQYFAPVIFFLSLIAIIYASLVSMVQTDI 299 (499)
Q Consensus 221 ~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~-~~~~~~~~l~~l~~~t~~~g~l~al~q~d~ 299 (499)
+|+|++|||.|+||+|++||+|+|+++|++++|+|.|+++|+.....+. ....+.+.+.++|++|+++|++.|++|+|+
T Consensus 226 ~K~a~~PfH~WlPday~~aPt~vSalls~v~~k~g~y~llr~~~~~~~~~~~~~~~~~l~~lg~lsii~g~l~Al~Q~dl 305 (491)
T PRK06458 226 TKVGLFPMHAWLPDAHSEAPSPVSAVLSGVLLNVALYALLRYYIIIDAAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDI 305 (491)
T ss_pred HHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_conf 88562526688505756088438999999999999999999999861202579999999999999999999999998376
Q ss_pred CCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHH
Q ss_conf 32233210013540233310487542210234555421023330356777764200111100235565420233201345
Q gi|254780866|r 300 KKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVF 379 (499)
Q Consensus 300 KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~ 379 (499)
||++|||||+|+||++++++.+++.+..++++|+++|+++|+++|+++|.+++++|++|++|+||+.|++|.++.++.++
T Consensus 306 KrlLAYSsIsq~G~i~~gi~~~~~~~~~~al~~~i~h~l~k~~LFl~~g~i~~~~g~~~i~~l~Gl~~~~P~~~~~~~i~ 385 (491)
T PRK06458 306 KRLFAYSSIEHMGLITFAFGIGGPLGNFAALLHMLNHSLTKSAIFFASGNVLQKYGTQDINVIRGLLKVMPFTGWGLMLG 385 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCHHHHHHHHHHHHHHH
T ss_conf 68999999999999999999588789999999999999999899999999999859806998719798839999999999
Q ss_pred HHHHCCCHHHHHHCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 555301024443112289999999865-9999999999999999999999999728898765556878891268999999
Q gi|254780866|r 380 TMANMGLPGTSGFIGEFLVIMSVFQNS-NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPI 458 (499)
Q Consensus 380 ~lsl~G~Pp~~GF~~k~~i~~~~~~~~-~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l 458 (499)
.+|++|+||++||+|||++++++++.+ ++..++..+++.+++.|++|.++++++|+++++. +.+|.+++|..|+.++
T Consensus 386 ~lsl~GiPp~~GF~~K~~i~~~~~~~~~~~l~~~~~~~s~l~~~y~~~~~~~~~fg~~~~~~--~~~~~~~~~~~~~~il 463 (491)
T PRK06458 386 VLAIAGMPPFGVFISEFLILTAGLARGHPWLAILLLLLLTLAFAALVRRVTGMVFGEPPQAV--NRGDLGWLTLLPMFIH 463 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHHHH
T ss_conf 99999887997899999999999981879999999999999999999999998418999766--8899978799999999
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHH
Q ss_conf 9999999772-4889999999999998
Q gi|254780866|r 459 AVLTVFFGIY-PVPIRDTFSVPLSSII 484 (499)
Q Consensus 459 ~~~~i~lGi~-p~~~~~~~~~~~~~l~ 484 (499)
++.++.+|+| |+|+.+..++++.-++
T Consensus 464 ~~~~i~~Gl~~p~pl~~~~~~~a~~~~ 490 (491)
T PRK06458 464 LVLMLVLGLYLPPPLVRWLQHAATIVL 490 (491)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHC
T ss_conf 999999997274899999999999847
No 30
>PRK08667 hydrogenase membrane subunit; Validated
Probab=100.00 E-value=0 Score=641.64 Aligned_cols=464 Identities=21% Similarity=0.340 Sum_probs=384.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEE
Q ss_conf 30789999999999999987203553035799999999999999999999863088881899986313485405466522
Q gi|254780866|r 3 LPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLGVD 82 (499)
Q Consensus 3 ~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iD 82 (499)
..++...+++|++++++..+.+..+.+. +..........+............+. ...... +.+ .+..++++++|
T Consensus 3 ~~l~l~~i~lpl~ga~l~ll~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~-~~~-~~~~~~~f~vD 76 (644)
T PRK08667 3 AGLFLGAILLLLAAAVIPLVFRHKNIRV---WQSSLLLLIASALLLLFALLVLFTGN-PLDIPL-WGI-APGLDITFHID 76 (644)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHH---HHHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEE-EEE-CCCCEEEEEEC
T ss_conf 7899999999999999999825875106---99999999999999999999995489-838986-420-69962898855
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCC-----HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEEC-C
Q ss_conf 588999999999999999752011210-----0235678999863024302654043311123431034312355312-3
Q gi|254780866|r 83 GISILLVVLTTFLTPFCILSSWKSIQE-----NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVW-G 156 (499)
Q Consensus 83 ~ls~~f~~l~~~i~~l~~~ys~~~~~~-----~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~-~ 156 (499)
++|..|..++++++.++.+|+.+|+++ |.++|+.++.++..+|++++.|+|++++|++||++++++|.|+.++ +
T Consensus 77 ~LS~~fl~lv~~v~~~v~lYs~~Y~~~~~~~~r~~~~~~~~~Lf~~sm~~vv~a~dl~~~~vfwE~m~l~sy~LI~~~~~ 156 (644)
T PRK08667 77 RLAAFFIILIGLVSLCVAIYSLGYNEHMKSNERANLLSALTALFILSMLLVVASANTISFLVFWEIMALSSFFLVMNDYQ 156 (644)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 66899999999999999999628866276863141999999999999999999837999999999999999999840099
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 43323210001135544556776665544321000100344321013303789999854103444554000232010100
Q gi|254780866|r 157 GSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAH 236 (499)
Q Consensus 157 ~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y 236 (499)
++++.+|++||++++++|+.+++.|+..+|..+||+|+...... .....+.++++++|++.|+|++|||.|+||+|
T Consensus 157 ~~~~~~Aa~ky~i~~~~G~~~ll~g~~~l~~~~Gs~~~~~~~~~----~~~~~l~~~llliGf~~Kag~~P~H~WLP~A~ 232 (644)
T PRK08667 157 EEETQRAGFFYFVMTQLSTVFLMLGIILLFIQTGSFELSPLGAP----SGSLPLVFLLLFLGFGIKAGIIPFHKWLPYAH 232 (644)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
T ss_conf 89999999999999999999999999999999761889998864----21489999999999999880502697606666
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHH
Q ss_conf 02222344333323223332111000011122331000000000122222122111000024432233210013540233
Q gi|254780866|r 237 VQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTI 316 (499)
Q Consensus 237 ~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~ 316 (499)
++||+|+||++|++++|+|+|+++|+...+++. +.+|...+.++|.+|+++|++.|+.|+|+||++|||||+|+|||++
T Consensus 233 ~~APtpVSALlsgvmvk~gvy~liR~~~~~~~~-~~~~~~~ll~lG~iT~l~G~l~Al~Q~DiKrlLAYSSisqiG~i~l 311 (644)
T PRK08667 233 PASPSPVSALMSGVMLKVAVYGLIRFLMDVLAP-ELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILM 311 (644)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 789808999999999999999999999985140-5899999999999999999999997621899999999999999999
Q ss_pred HHCCC-----------CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCC
Q ss_conf 31048-----------7542210234555421023330356777764200111100235565420233201345555301
Q gi|254780866|r 317 GIFSG-----------MKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMG 385 (499)
Q Consensus 317 ~l~~~-----------~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G 385 (499)
+++.+ ...++.++++|++||+++|+.+|+++|.+++++||+|++|+||+.|+||+++.++.++.+|++|
T Consensus 312 glG~~~~~~~~g~~~l~~la~~~al~hl~nHa~fKalLFl~aG~v~~~tgt~~i~~lgGL~k~mP~t~~~f~ig~lai~G 391 (644)
T PRK08667 312 GIGLYVIFGVYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKRMPYTSALFLVGAVSIAA 391 (644)
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99874310113511567889999999999999999999999879999718702999689443218999999999999873
Q ss_pred CHHHHHHCCHHHHHHHHHHHH----HH-------HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 024443112289999999865----99-------9999999999999999999999972889876555687889126899
Q gi|254780866|r 386 LPGTSGFIGEFLVIMSVFQNS----NT-------VAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCM 454 (499)
Q Consensus 386 ~Pp~~GF~~k~~i~~~~~~~~----~~-------~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 454 (499)
+||++||+|||+++++.++.. .. ......++..+++.++.|.+...|.|++|+++.++.+|.++.|..+
T Consensus 392 lPP~~GF~Sk~li~~~~~~~~~~~~~~~~~~~~~~~~~lal~~~la~~~~~k~~g~~Flg~pr~~~~~~a~e~~~~m~~~ 471 (644)
T PRK08667 392 LPPFNGFASELLLYESFFQSFSVADPLIKILLFVVLALFALTSALAAACFVKAFGITFLAMPRSQEARSAREVSKPMLIG 471 (644)
T ss_pred CCHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 72004799999999999854565423799999999999999999999999999998613888985434667798127899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999772488999999
Q gi|254780866|r 455 VYPIAVLTVFFGIYPVPIRDTFS 477 (499)
Q Consensus 455 ~~~l~~~~i~lGi~p~~~~~~~~ 477 (499)
+.++++.|+..|++|..+.+...
T Consensus 472 ~~~la~~~~~~g~~~~~~~~~~~ 494 (644)
T PRK08667 472 PAVLAVACLVLGLFSVQIFSLAG 494 (644)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999964688998627
No 31
>PRK12644 putative monovalent cation/H+ antiporter subunit A; Reviewed
Probab=100.00 E-value=0 Score=638.55 Aligned_cols=471 Identities=22% Similarity=0.346 Sum_probs=399.3
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCC-CEEEEEEEEHH
Q ss_conf 89999999999999987203553035799999999999999999999863088881899986313485-40546652258
Q gi|254780866|r 6 LSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDY-FCSYHLGVDGI 84 (499)
Q Consensus 6 l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~iD~l 84 (499)
+.+++..+. ++.+........ +|+..+ ......+...............+.+..+.+.|+|. .+++++++|++
T Consensus 2 l~~~~~~~~-~a~~~p~l~r~~-gr~a~~----~~a~~~l~~~~~~~~~~~~~~~g~~~~~~~~Wip~lgl~l~~rlDgL 75 (968)
T PRK12644 2 LALLLAHAA-AAVLAPLLVRRL-GRRAFY----PLALVPAASFVWVLAQWPAVTPGGEVTVSLPWIPSLGMDLAFRMDAL 75 (968)
T ss_pred HHHHHHHHH-HHHHHHHHHHHH-CHHHHH----HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEECHH
T ss_conf 279999999-999999999984-408889----99999999999999967645689748998632367887268874267
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCC---CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-CC
Q ss_conf 899999999999999975201121---00235678999863024302654043311123431034312355312343-32
Q gi|254780866|r 85 SILLVVLTTFLTPFCILSSWKSIQ---ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS-ER 160 (499)
Q Consensus 85 s~~f~~l~~~i~~l~~~ys~~~~~---~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~-~~ 160 (499)
|.+|..+++.++.++.+|+.+|.+ ++.++||.+++++.++|++++.|+|++++|+|||++++++|.||++|+++ ++
T Consensus 76 S~lfalli~~IG~lv~lYs~~Y~~~~~~~~~rF~~llllF~~aMlGlvls~dl~~lfvfWEltsl~SylLIg~~~~~~~a 155 (968)
T PRK12644 76 AALMSLLVLGVGALVLLYCARYFDDDDGRLGRFAAELVAFAGAMFGLVLSDDLLLLYVFWELTTVLSFLLIGHYAERAAS 155 (968)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 89999999999999999968875148987125999999999999999998219999999999999999999764788889
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 32100011355445567766655443210001003443210133037899998541034445540002320101000222
Q gi|254780866|r 161 IYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAP 240 (499)
Q Consensus 161 ~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap 240 (499)
.+++.||++++.+|+..++.|+.++|..+||+|+.++.+..+. .........++++|+..|+++||||+||||+| +||
T Consensus 156 ~~aA~k~ll~t~~Ggl~lL~giilL~~~~Gt~~ls~i~~~~~~-~~~~~~a~~Lil~Ga~~KsAqfPfH~WLP~Am-aAP 233 (968)
T PRK12644 156 RRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPPT-GTAVSVAVVLILVGALSKSAIVPFHFWLPGAM-AAP 233 (968)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-CCC
T ss_conf 9999999999999999999999999999387439999744766-44899999999999999865354600165110-489
Q ss_pred CCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 2344333-323223332111000011122331000000000122222122111000024432233210013540233310
Q gi|254780866|r 241 TAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIF 319 (499)
Q Consensus 241 ~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~ 319 (499)
||+|+++ |++++|+|+|.+.|+. +.+.+ .+.|.+.+..+|.+|+++|++.|++|+|+||++|||||||+|||.++++
T Consensus 234 TPVSA~LHSa~mVKaGvYll~R~~-p~~~~-~~~w~~~l~~lG~~T~l~Ga~~Al~Q~DlKrlLAYSTVSqLG~i~l~lG 311 (968)
T PRK12644 234 TPVSAYLHAAAMVKAGVYLVARLA-PGFAD-VPPWRPTVLGLGLATMLLGGWRALRQYDLKLILAYGTVSQLGFLTVVVG 311 (968)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHH-HHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 679999999999999999999998-87523-6999999999999999999999996644899999988999999999986
Q ss_pred CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHH
Q ss_conf 48754221023455542102333035677776420011110023556542023320134555530102444311228999
Q gi|254780866|r 320 SGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVI 399 (499)
Q Consensus 320 ~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~ 399 (499)
.+++.+..++++|++||+++|+.+|+++|.+++++||||++|++|+.|+||+++.++.++.+|++|+||++||+||.+.+
T Consensus 312 lgt~~a~~aa~~hll~HAlfKa~LFm~aG~i~h~tGtrdi~~LgGL~r~mP~Ta~~~~iaalSmaGvPp~~GF~sKE~~~ 391 (968)
T PRK12644 312 LGTRDAALAGLAMLVAHALFKATLFLVVGIIDHQTGTRDIRKLSGLGRRSPPLAVVAALAAASMAGLPPLLGFVAKEAAF 391 (968)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 26799999999999999999999998563867870875488838955303999999999999985165102799999999
Q ss_pred HHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999986------5999999999999999999999999972889876-555687889126899999999999997724889
Q gi|254780866|r 400 MSVFQN------SNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCE-KVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPI 472 (499)
Q Consensus 400 ~~~~~~------~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~ 472 (499)
++..+. +++....+.+++.++..|+.|.+...|+++++++ ..++.+|.++.+..+..+++.+++.+|++|.+.
T Consensus 392 ~a~l~~~~~~~~~~~~~~~~~~~s~lt~aYs~rf~~~~F~~~~~~~~~~~~~h~~~~~m~~pp~~La~~~l~~G~~p~~~ 471 (968)
T PRK12644 392 EAVLHSMLLGPAGPWVLAGIVLGSVLTTAYSLRFLWGAFARKPGVPPRVTEMHPPSPAFLAAPAVLAALTLVLGLWPAPL 471 (968)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99870544211899999999999999999999999974268999988878899998078788999999999998227766
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999852
Q gi|254780866|r 473 RDTFSVPLSSIIEN 486 (499)
Q Consensus 473 ~~~~~~~~~~l~~~ 486 (499)
-+.+.+++.+....
T Consensus 472 ~~~l~~~a~~~~~~ 485 (968)
T PRK12644 472 DAVIGPYADTVPGA 485 (968)
T ss_pred HHHHHHHHHHHCCC
T ss_conf 88889999974168
No 32
>PRK12646 putative monovalent cation/H+ antiporter subunit A; Reviewed
Probab=100.00 E-value=0 Score=635.09 Aligned_cols=474 Identities=20% Similarity=0.380 Sum_probs=392.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCC-CEEEEEEEE
Q ss_conf 0789999999999999987203553035799999999999999999999863088881899986313485-405466522
Q gi|254780866|r 4 PFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDY-FCSYHLGVD 82 (499)
Q Consensus 4 p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~iD 82 (499)
+++.+++.+|++.+.++.....+..+|+..+ ......+...............+.+..+.++|.|. .+++++++|
T Consensus 2 ~ll~lli~l~~~~a~~l~~~~~r~~~~~ag~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~W~P~lgi~~~~~lD 77 (800)
T PRK12646 2 SLVYLLIAILVIMAMILLMSKRRALAKYAGY----IALVAPVISSIYFLIQIPSVAKLQYLSTSIPWIKTLDINLDLRLD 77 (800)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEEH
T ss_conf 7489999999999999998501133467899----999999999999999574103798699876440478865899643
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCC---HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECC-CC
Q ss_conf 588999999999999999752011210---02356789998630243026540433111234310343123553123-43
Q gi|254780866|r 83 GISILLVVLTTFLTPFCILSSWKSIQE---NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWG-GS 158 (499)
Q Consensus 83 ~ls~~f~~l~~~i~~l~~~ys~~~~~~---~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~-~~ 158 (499)
++|.+|..+++.++.++.+|+.+|+++ +.+|||.+++++.++|.++++|+|++++|+|||++++++|.||++|+ ++
T Consensus 78 gLs~lf~lLi~~Ig~lV~~Ys~~Ym~~~~~~~~rF~~~lllF~~aMlglvlA~nli~lfvfWEl~si~SylLIg~~~~~~ 157 (800)
T PRK12646 78 GLSLMFSLIISLIGIAVFFYATQYLSSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNG 157 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 76899999999999999999598758899974389999999999999999982799999999999999999980408989
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC--HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3232100011355445567766655443210001003443210133--03789999854103444554000232010100
Q gi|254780866|r 159 ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFP--FSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAH 236 (499)
Q Consensus 159 ~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~--~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y 236 (499)
++.+++.||++++..|+..++.|+.++|..+||.|+.++.+..+.. ........+++++|+..|+|+||||+|+||+|
T Consensus 158 ~~~~aA~~~ll~t~~G~l~lL~g~~ll~~~~Gt~~~s~i~~~~~~~~~~~~~~~~~~liliGa~~KsAqfPfH~WLP~Am 237 (800)
T PRK12646 158 DSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAM 237 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999999999999999999999999999987418999999888752262899999999999999952066753335555
Q ss_pred CCCCCCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHH
Q ss_conf 02222344333-32322333211100001112233100000000012222212211100002443223321001354023
Q gi|254780866|r 237 VQAPTAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVT 315 (499)
Q Consensus 237 ~~ap~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~ 315 (499)
++|||+|+++ |++++|+|+|.++|+. +.+. ..+.|.+.+.++|.+|+++|++.|++|+|+||++|||||+|+|||+
T Consensus 238 -~APTPVSA~LhSa~mVKaGvyll~R~~-p~~~-~~~~~~~~l~~~G~~T~l~ga~~Al~Q~DlKrlLAYSTvSqlG~i~ 314 (800)
T PRK12646 238 -AAPTPVSAYLHSATMVKAGIFLLLRFT-PLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIM 314 (800)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -688659999999999999999999987-7622-3699999999999999999999999674489999999999999999
Q ss_pred HHHCCCCCCC--------------CCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 3310487542--------------21023455542102333035677776420011110023556542023320134555
Q gi|254780866|r 316 IGIFSGMKSG--------------VEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTM 381 (499)
Q Consensus 316 ~~l~~~~~~~--------------~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~l 381 (499)
++++.|++.+ +.++++|++||+++|+.+|+++|.+.+++||||++|++|+.|+||+++.++.++.+
T Consensus 315 l~iGlG~~~a~~~~~~l~~~~~~~l~aal~hl~~HalfKa~LFm~aG~I~~~tGtrdi~~LgGL~r~MP~ta~~~~iaal 394 (800)
T PRK12646 315 AMVGIGGGYAQHQQDAIASIYVFVLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAAL 394 (800)
T ss_pred HHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 99975733220232102356777999999999999999999999999999971875187848966423899999999999
Q ss_pred HHCCCHHHHHHCCHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCCCC
Q ss_conf 53010244431122899999998659----------99999999999999999999999972889876555-68788912
Q gi|254780866|r 382 ANMGLPGTSGFIGEFLVIMSVFQNSN----------TVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQ-QLKDLSLR 450 (499)
Q Consensus 382 sl~G~Pp~~GF~~k~~i~~~~~~~~~----------~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~-~~~~~~~~ 450 (499)
|++|+||++||+||.+.+++..+.+. .....+.+++.++..|..|...+.|+|+.+++..+ +.++.++.
T Consensus 395 SmaGlPP~~GF~sKE~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~s~lt~ays~r~~~~~F~g~~~~~~~~~~~~~~p~~ 474 (800)
T PRK12646 395 SMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLISMIAIVFVGVIASIFTFTYALYMVKEVFWTKYDSKVFTKKNIHEPWL 474 (800)
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
T ss_conf 98178520048889999999973345410346899999999999999999999999997037999877689889998325
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6899999999999997724889999999999998
Q gi|254780866|r 451 ERCMVYPIAVLTVFFGIYPVPIRDTFSVPLSSII 484 (499)
Q Consensus 451 ~~~~~~~l~~~~i~lGi~p~~~~~~~~~~~~~l~ 484 (499)
+..|..++...+...|++|..+.+....++.+..
T Consensus 475 ~~~p~~~l~~~~~~~g~~p~~~~~~~~~~~~~a~ 508 (800)
T PRK12646 475 FSLPSLILMVLVPVIFFVPNIFGKGIIVPALRAV 508 (800)
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_conf 6568999999999999354744223368999874
No 33
>PRK05777 NADH dehydrogenase subunit N; Provisional
Probab=100.00 E-value=0 Score=633.25 Aligned_cols=466 Identities=21% Similarity=0.353 Sum_probs=394.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEE
Q ss_conf 98307899999999999999872035530357999999999999999999998630888818999863134854054665
Q gi|254780866|r 1 MNLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLG 80 (499)
Q Consensus 1 m~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (499)
||+ .+-++.++|+.++++..+.+...+++++... ...+...............++..... .+..+.
T Consensus 6 ~~~-~~llP~lill~~al~~ll~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 71 (478)
T PRK05777 6 LNL-QLLLPELILLIGALALLLVDLFIGRRNRRLT--ATLAVAGLVVALVSLLFVASGGTGVA-----------FNGMFV 71 (478)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH--HHHHHHHHHHHHHHHHHHCCCCCHHH-----------HCCEEE
T ss_conf 109-9999999999999999999997540336899--99999999999999999807875203-----------120147
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-C
Q ss_conf 225889999999999999997520112100235678999863024302654043311123431034312355312343-3
Q gi|254780866|r 81 VDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS-E 159 (499)
Q Consensus 81 iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~-~ 159 (499)
+|++|..+..++..++.++.+|+.++.|++++||+.+++++..|+++++.|+|++++|++||++++++|.|+++++++ +
T Consensus 72 vD~ls~~~~~l~~~~~~~~~l~s~~~~~~~~~~f~~l~l~~~~g~~~~~~s~dl~~l~v~~El~sl~~y~Li~~~~~~~~ 151 (478)
T PRK05777 72 VDGFALFLKGLILLASALTLVLAREYLKDRNGEFYLLVLFAVLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRR 151 (478)
T ss_pred ECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 75678999999999999999999999866776599999999999999999836999999999999999987987279889
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC---CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 23210001135544556776665544321000100344321013---303789999854103444554000232010100
Q gi|254780866|r 160 RIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKF---PFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAH 236 (499)
Q Consensus 160 ~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~---~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y 236 (499)
+.||+.||++++.+|+.++++|+.++|..+||+|++++....+. +.........++++|+++|+|++|||.|+||+|
T Consensus 152 s~eAa~ky~l~~~~~s~~lL~gi~~ly~~tGs~~~~~l~~~~~~~~~~~~~~~~~~~l~l~g~~~K~a~~PfH~WlPday 231 (478)
T PRK05777 152 SLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSLAGIAKALADGMLNSLLLLFGLVFLLAGLAFKLSAVPFHMWTPDVY 231 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
T ss_conf 99999999999799999999999999988199749999998753665418999999999999998727376561414363
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHH
Q ss_conf 02222344333323223332111000011122331000000000122222122111000024432233210013540233
Q gi|254780866|r 237 VQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTI 316 (499)
Q Consensus 237 ~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~ 316 (499)
++||+|+|+++|++.+|.+.+.++|+..+.+++....+...+.++|++|+++|++.|++|+|+||++|||||+|+||+++
T Consensus 232 ~~APt~vsa~ls~~~k~a~~~~l~r~~~~~~~~~~~~~~~~l~~l~~~s~~~g~l~Al~Q~d~KRlLAYSsIs~~G~il~ 311 (478)
T PRK05777 232 EGAPTPVTAFLATAPKIAAFAVLLRLFYVAFGPLSEDWQQVLAIIAILSMIVGNLAAISQTNIKRLLAYSSIAHMGFLLV 311 (478)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 58981687898889999999999999998615447999999999999999999999998860647887679864639999
Q ss_pred HHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCC-CCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCH
Q ss_conf 3104875422102345554210233303567777642001-111002355654202332013455553010244431122
Q gi|254780866|r 317 GIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHT-RDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGE 395 (499)
Q Consensus 317 ~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~-~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k 395 (499)
+++.+++.++.++++|+++|+++|.++|.++|.+++++++ +|++|++|+.|++|+++.++.++.+|++|+||++||+||
T Consensus 312 gi~~~~~~~~~~~~~~~~~h~~~~~~lF~~~~~l~~~~~~~~~i~~l~Gl~~~~P~~a~~~~i~~lsl~GiPp~~GF~~K 391 (478)
T PRK05777 312 GLAAGTVAGYSAAMFYLLAYLFMTLGAFGVILLLSRKGFEAESIDDFAGLNKRSPVLAAVMTIFMLSLAGIPPTAGFWGK 391 (478)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 99972688999999999999999999999999999657970309986432324938999999999998088521308899
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999865-99999999999999999999999997288987655568788912689999999999999772488999
Q gi|254780866|r 396 FLVIMSVFQNS-NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRD 474 (499)
Q Consensus 396 ~~i~~~~~~~~-~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~ 474 (499)
|.+++++++++ +++.+++++++++++.|++|+++++|+++++++.. ++.++.+..++.++++.++.+|++|+++.|
T Consensus 392 ~~i~~~~~~~~~~~l~~~~~~~s~is~~Yylri~~~~f~~~~~~~~~---~~~~~~~~~~~~i~a~~~i~~Gi~P~~ll~ 468 (478)
T PRK05777 392 FYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKVMYFDEPEGEPR---DAPSNLRLVVLSVSALLVLVLGILPQPLLD 468 (478)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999748499999999999999999999999993289985446---788715899999999999999953799999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780866|r 475 TFSVPLSSI 483 (499)
Q Consensus 475 ~~~~~~~~l 483 (499)
..+++++.+
T Consensus 469 ~~~~aa~~l 477 (478)
T PRK05777 469 LAVQAARLL 477 (478)
T ss_pred HHHHHHHHH
T ss_conf 999999974
No 34
>PRK12650 putative monovalent cation/H+ antiporter subunit A; Reviewed
Probab=100.00 E-value=0 Score=628.46 Aligned_cols=468 Identities=20% Similarity=0.280 Sum_probs=393.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCC------EEEEEEE
Q ss_conf 9999999999999872035530357999999999999999999998630888818999863134854------0546652
Q gi|254780866|r 8 IVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYF------CSYHLGV 81 (499)
Q Consensus 8 lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~i 81 (499)
.++.+|++++.+..+..+... |+..+..+.. .+...............+....+.+.|+|.. +++++++
T Consensus 3 ~~~~~~~~~a~~ap~l~r~~g-r~a~~~~a~~----~~~~~~~~~~~~~~~~~g~~~~~~~~Wip~lg~~~~~l~~~lrl 77 (969)
T PRK12650 3 AVLALAAVAVVLAPLLVKVLD-RKAGWPLAVT----FVVAAGLLLKEAGPILAGQALTWSVTWVPDFLGSGVDVNFALRA 77 (969)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHH----HHHHHHHHHHHCCHHCCCCEEEEEEEEECCCCCCCCCEEEEEEE
T ss_conf 899999999999999998605-2048999999----99999999997301127966899887400126787771599975
Q ss_pred EHHHHHHHHHHHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 2588999999999999999752011210--02356789998630243026540433111234310343123553123433
Q gi|254780866|r 82 DGISILLVVLTTFLTPFCILSSWKSIQE--NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSE 159 (499)
Q Consensus 82 D~ls~~f~~l~~~i~~l~~~ys~~~~~~--~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~ 159 (499)
|++|..|..+++.++.++.+|+..|+++ +.+|||.+++++.++|+|++.|+|++++|+|||++++++|.||++++ ++
T Consensus 78 DgLs~lfalLi~~IG~lV~lYs~~Ym~~~~~~~rFy~~lllF~~aMlGlVls~nll~lfvFWEltsl~SylLIg~~~-~~ 156 (969)
T PRK12650 78 DALSLFFALLALLIGAVVFIYSARYLHKGDGNTSFYTLMTAFMAAILLLVLADDVVVLFIGWELVSLASFMLIARSG-SS 156 (969)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC-HH
T ss_conf 07789999999999999999969966899982449999999999999999974099999999999999999990697-47
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC--HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 232100011355445567766655443210001003443210133--037899998541034445540002320101000
Q gi|254780866|r 160 RIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFP--FSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHV 237 (499)
Q Consensus 160 ~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~--~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~ 237 (499)
+.+++.||++++.+|+..++.|+.++|..+||+|++++.+..... .........++..|...|+++||||+|+||+|
T Consensus 157 ar~aA~kallvt~~Ggl~lL~gi~ll~~~tGt~~ls~il~~~~~~~~~~~~~~~~~Li~~gaf~KSAqfPfH~WLP~Am- 235 (969)
T PRK12650 157 GEAGSIRTLILTFIGGLTLLTALAIAVTQTGTTNLDAILHSPFWAEKPVLTGVIAVLIAMAAFTKSAQFPFHFWLPEAM- 235 (969)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC-
T ss_conf 8999999999999999999999999999958830999983130034615999999999999998833054344155000-
Q ss_pred CCCCCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHH
Q ss_conf 2222344333-323223332111000011122331000000000122222122111000024432233210013540233
Q gi|254780866|r 238 QAPTAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTI 316 (499)
Q Consensus 238 ~ap~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~ 316 (499)
++|+|+|+++ |++++|+|+|.++|+. +.+.+ .+.|.+.+.++|.+|+++|++.|++|+|+||++|||||||+|||.+
T Consensus 236 ~APTPVSA~LhSAtMVKaGvyll~R~~-p~~~~-~~~w~~~l~~~G~~T~l~Ga~~Al~Q~DlKrlLAYSTVSqLG~i~l 313 (969)
T PRK12650 236 AAATPVSAFLHAAAVVKAGIYLLLRFS-GVFSD-VAVWNWLLIIVGMGTAIMGAFFAVQKTDLKKLTAYSTVSQLGWIVA 313 (969)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 589829999999999999999999999-98600-2999999999999999999999997755899999998999999999
Q ss_pred HHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHH
Q ss_conf 31048754221023455542102333035677776420011110023556542023320134555530102444311228
Q gi|254780866|r 317 GIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEF 396 (499)
Q Consensus 317 ~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~ 396 (499)
+++.+++.++.++++|++||+++|+.||+++|.+.+++||||++|++|++|+||+++.++.++.+|++|+||++||+||.
T Consensus 314 ~lGlgt~~a~~aal~hlv~HAlfKa~LFm~aG~I~h~tGtrdi~~LgGL~r~mP~t~~~~~iaalSmaGvPp~~GF~sKE 393 (969)
T PRK12650 314 TIGVGTPFALTAAIVHTLAHALFKSSLFMLVGVIDHQTGTRDIRRLGSLWRQMPFTFVSVVIAALSMAAVPPTFGFVSKE 393 (969)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 98578677999999999999999999999860889982641698857866536999999999999982776211599999
Q ss_pred HHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999865------9999999999999999999999999728898765556878891268999999999999977248
Q gi|254780866|r 397 LVIMSVFQNS------NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPV 470 (499)
Q Consensus 397 ~i~~~~~~~~------~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~ 470 (499)
+.+++..+.. +.+.+.+.++++++..|++|.+...|+++++++ ++.+|.|+.+..|..+++++++..|++|.
T Consensus 394 ~~~~a~l~~~~~~~~~~~~~~~a~~gs~lt~aYs~Rf~~~~F~~~p~~~--~~~~e~p~~m~~p~~~La~l~l~~G~~p~ 471 (969)
T PRK12650 394 GMITAFMEAPIGNAGVVLLLVGAGLGALATFTYSARYVLGAFVDGPRDM--SHVKEAPVSLWLPAALPGVLSLPAVLFLS 471 (969)
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHCHH
T ss_conf 9999998564532189999999999999999999999997238999987--78899981566899999999999983416
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 8999999999999852
Q gi|254780866|r 471 PIRDTFSVPLSSIIEN 486 (499)
Q Consensus 471 ~~~~~~~~~~~~l~~~ 486 (499)
+..+..++++++...+
T Consensus 472 ~~~~~l~~~a~~~~~~ 487 (969)
T PRK12650 472 LFDAPVSAAATATGGE 487 (969)
T ss_pred HHHHHHHHHHHHHCCC
T ss_conf 5578899999874378
No 35
>PRK07390 NAD(P)H-quinone oxidoreductase subunit F; Validated
Probab=100.00 E-value=0 Score=627.28 Aligned_cols=458 Identities=20% Similarity=0.293 Sum_probs=395.0
Q ss_pred HHHHHHHHHHHHHHHHHH--C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEEH
Q ss_conf 999999999999998720--3-5530357999999999999999999998630888818999863134854054665225
Q gi|254780866|r 7 SIVTFLPFLGVFVILFSS--Y-LGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLGVDG 83 (499)
Q Consensus 7 ~lii~lPll~~li~~~~~--~-~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iD~ 83 (499)
++++++|++++++..... . .+..+|....++.....+.++.+...+....++.+.....++..-.+..+++++.+|+
T Consensus 10 WLIp~~Pl~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~D~ 89 (615)
T PRK07390 10 WLIPLYGLIGALLSLPWSPGIIRRTGPRPAAYLNLLMTLLAFLHSLLALRAVWNQPPQQLSFPWLQVADLDLSLSLEISP 89 (615)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEEHHH
T ss_conf 99999989999998776523332257308999999999999999999999970898389999978888882798543547
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCC-CCC
Q ss_conf 8899999999999999975201121--0023567899986302430265404331112343103431235531234-332
Q gi|254780866|r 84 ISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGG-SER 160 (499)
Q Consensus 84 ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~-~~~ 160 (499)
+|..+..+++.++.++.+||.+|++ ++..||+.+++++.++|++++.|+|++++|++||++++|||.||++|.+ +++
T Consensus 90 Ls~~m~~vvt~v~~li~iYS~gYm~~d~~~~rf~~~l~lF~~~Ml~lv~a~nl~~~f~~WE~vgl~SylLIgfw~~~~~~ 169 (615)
T PRK07390 90 VTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEMLTLSTYLLVGFWYAQPLV 169 (615)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 89999999999999999984885579988404999999999999999995619999999999999999999686598899
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC---CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 321000113554455677666554432100010034432101---33037899998541034445540002320101000
Q gi|254780866|r 161 IYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSK---FPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHV 237 (499)
Q Consensus 161 ~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~---~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~ 237 (499)
.+|+.|+++.+++|+..++.|+..+|..+||+|++++.+..+ .+.....+..+++++|+..|+||+|+|.||||+ +
T Consensus 170 ~~aa~kafi~~rvGd~~~l~gi~~l~~~~Gt~~~~~l~~~~~~~~~~~~~~~~~~l~l~~G~~~KsAq~Plh~WLPdA-M 248 (615)
T PRK07390 170 VTAARDAFLTKRVGDLLLLMGVVALSPLAGSWNFSDLAAWAATANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEA-M 248 (615)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH-H
T ss_conf 999999999994889999999999999978888999999986077885899999999999987652307574344565-2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHH
Q ss_conf 22223443333232233321110000111223310000000001222221221110000244322332100135402333
Q gi|254780866|r 238 QAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIG 317 (499)
Q Consensus 238 ~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~ 317 (499)
|+|||+|+++|++++|+|+|.+.|.. +++.. .+....++.++|.+|+++|+..|+.|+|+||++||||+||+|||+++
T Consensus 249 ~gPTPvSaL~~A~mV~aGvyl~~R~~-p~~~~-~~~~~~~i~~iG~~T~~~aa~~Al~Q~DiKrvLAYSTiSQlGym~~a 326 (615)
T PRK07390 249 EGPNPASILRNSVVVATGAWVLIKLQ-PVLAL-SPVALTVLIAIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIA 326 (615)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHC-CCHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 58985999999999999999999975-31202-78999999999999999999999856316488761289899999998
Q ss_pred HCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHH
Q ss_conf 10487542210234555421023330356777764200111100235565420233201345555301024443112289
Q gi|254780866|r 318 IFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFL 397 (499)
Q Consensus 318 l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~ 397 (499)
++.+. ..++++|+++|+++|++||+++|.+.+++|++|++++||+.|+||.++.++.++.+|++|+||++||+||..
T Consensus 327 ~g~g~---~~~a~fhl~~HA~fKalLFl~aGsvi~~~~~~di~~mgGL~~~mP~t~~~f~ig~lal~GiPp~~GF~SKd~ 403 (615)
T PRK07390 327 VGLGQ---PDIALLLLLTHAIAKALLFMSVGSVILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLR 403 (615)
T ss_pred HHCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 62671---999999999999998888864899999740868998679602347999999999999840550317989999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999986599999999999999999999999997288987655568788912689999999999999772488
Q gi|254780866|r 398 VIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVP 471 (499)
Q Consensus 398 i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~ 471 (499)
+++++.+.++++..+..++..+++.|+.|.+..+|+|+++++. ++.+|.++.|..|+.++++.++..|..+..
T Consensus 404 il~~~~~~~~~l~~i~l~~a~lTafYm~Rl~~l~F~G~~~~~~-~~~~Esp~~M~iPLviLA~~si~~g~~~~~ 476 (615)
T PRK07390 404 LADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLGKPQQKT-RRSPEVLWPMALPMVSLAGLTLHLPLLLQQ 476 (615)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999865341999999999999999999999975079998546-778984258899999999999999898700
No 36
>PRK07376 NAD(P)H-quinone oxidoreductase subunit F; Validated
Probab=100.00 E-value=0 Score=625.27 Aligned_cols=462 Identities=20% Similarity=0.370 Sum_probs=382.4
Q ss_pred CHHHHHHHHHHHHHHHHHHH--HCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC---CCE
Q ss_conf 07899999999999999872--0355---303579999999999999999999986308888189998631348---540
Q gi|254780866|r 4 PFLSIVTFLPFLGVFVILFS--SYLG---CGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWID---YFC 75 (499)
Q Consensus 4 p~l~lii~lPll~~li~~~~--~~~~---~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 75 (499)
.+.++++++|++++++..+. ...+ +.+|....+......+..+.+.........+.+..+ ..++|++ ..+
T Consensus 6 q~~wli~~lPl~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~w~~~~~~~~ 83 (667)
T PRK07376 6 EYAWLIPVLPLLGAVLVGLGLISFNRTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHPPVE--HLFEWASAGDFHL 83 (667)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE--EEEEEEECCCEEE
T ss_conf 99999999989999999888752662011057799999999999999999999999845898089--9988677187617
Q ss_pred EEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEE
Q ss_conf 546652258899999999999999975201121--002356789998630243026540433111234310343123553
Q gi|254780866|r 76 SYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIG 153 (499)
Q Consensus 76 ~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~ 153 (499)
++++.+|++|..+..+++.++.++.+||.+|++ ++..||+.+++++.++|++++.|+|++++|++||++++|+|.||+
T Consensus 84 ~~~~~~D~ls~~m~~~vt~v~~lv~iys~~Ym~~d~~~~rf~~~l~lf~~~ml~lv~s~nl~~lfv~wE~~gl~SylLIg 163 (667)
T PRK07376 84 PMGYVIDPLGAVMLVLVTTVALLVMIYSHGYMAHDPGYVRFFAYLSLFSSSMLGLVVSPNLVQIYVFWELVGMCSYLLVG 163 (667)
T ss_pred EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 98889653789999999999999999928863799984169999999999999999965299999999999999999886
Q ss_pred ECC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH-------CCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 123-433232100011355445567766655443210001003443210-------133037899998541034445540
Q gi|254780866|r 154 VWG-GSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMS-------KFPFSIQYWMWIAFFCSFAIKIPM 225 (499)
Q Consensus 154 ~~~-~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~-------~~~~~~~~~~~~ll~~g~~~K~~~ 225 (499)
+|. ++++.+|+.||++++++|+..+++|+..+|..+||+|++++.... ..+........+++++|+..|+||
T Consensus 164 ~~~~~~~a~~aa~kafi~~r~Gd~~~l~gi~~l~~~~gt~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~Ksaq 243 (667)
T PRK07376 164 FWYDRKGAAHAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFNGIADGLSQLVSSGAVPGWLALLLCILVFLGPMAKSAQ 243 (667)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 10686689999999999985869999999999999967971999999998876436654689999999999998767330
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCC
Q ss_conf 00232010100022223443333-23223332111000011122331000000000122222122111000024432233
Q gi|254780866|r 226 FPFHTWLPNAHVQAPTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIA 304 (499)
Q Consensus 226 ~PfH~WlP~~y~~ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllA 304 (499)
+|+|.||||++ |+|||+||+++ ++++|+|+|.+.|.. +++.. .+....++.++|.+|+++|+..|+.|+|+||++|
T Consensus 244 ~Plh~WLPdAm-~gPTpvSAllhaatmv~aGvyl~~R~~-~~~~~-~~~~~~~i~~~G~~T~~~~a~~Al~q~DiKr~LA 320 (667)
T PRK07376 244 FPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARMY-PVFEQ-FPAVMTVIAWTGAITAFLGASIALTQNDIKKGLA 320 (667)
T ss_pred CCCCCCCHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHC-CCHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 77623572430-499709999999999997897110135-31531-6899999999999999999999986413668885
Q ss_pred CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC---------CCCCCHHHHHHHHHHCCCCC
Q ss_conf 210013540233310487542210234555421023330356777764200---------11110023556542023320
Q gi|254780866|r 305 YSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLH---------TRDIFAYGGLVHNMPRYAVV 375 (499)
Q Consensus 305 ySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g---------~~~l~~l~Gl~~~~P~~~~~ 375 (499)
|||+||+|||+++++.+. +.++++|+++|+++|++||+++|.+.+.++ ++|+++|||+.|+||++..+
T Consensus 321 YSTisqlGym~~~~g~g~---~~aa~~hl~~Ha~fKalLFl~aG~vih~~~~~~~h~~~~~~d~~~mggl~~~mP~t~~~ 397 (667)
T PRK07376 321 YSTISQLGYMMMAMGCGA---YVAGLFHLVTHAYFKAMLFLGSGSVIHGMEEVVGHEPVLAQDMRLMGGLRKYMPITAIT 397 (667)
T ss_pred HHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHH
T ss_conf 346878889999941772---89999999989999999985233543213330357875540789858976687699999
Q ss_pred HHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC---------------
Q ss_conf 13455553010244431122899999998659999999999999999999999999728898765---------------
Q gi|254780866|r 376 MMVFTMANMGLPGTSGFIGEFLVIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEK--------------- 440 (499)
Q Consensus 376 ~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~--------------- 440 (499)
+.++.+|++|+||++||+||+.|++++++.++.+..+..++..+++.|+.|.+..+|+|++|.++
T Consensus 398 ~~ig~lsl~GiPp~~GF~SKd~il~~a~~~~~~~~~i~l~~a~lTafY~~Rl~~l~F~G~~r~~~~~~~~~~~~~~~~~~ 477 (667)
T PRK07376 398 FLIGCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRLYFLTFEGEFRGNDKELQKELLELAGKGS 477 (667)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCC
T ss_conf 99988987117411057648999999987482899999999998899999999999658667651334355654035676
Q ss_pred --------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf --------556878891268999999999999977248899
Q gi|254780866|r 441 --------VQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIR 473 (499)
Q Consensus 441 --------~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~ 473 (499)
.++.+|.|+.|..|+.++++.+++.|+...|..
T Consensus 478 ~~~~~~~~~~~pHESP~~MtlPLvILAi~Sv~~G~ig~pf~ 518 (667)
T PRK07376 478 DEEHHHHHAGSPHESPWSMTLPLVVLAVPSVLIGLLGTPWN 518 (667)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 54445677898776631368999999999999875058614
No 37
>TIGR00940 2a6301s01 monovalent cation:proton antiporter; InterPro: IPR005663 This family of proteins consists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterised systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter.; GO: 0015077 monovalent inorganic cation transmembrane transporter activity, 0030004 cellular monovalent inorganic cation homeostasis.
Probab=100.00 E-value=0 Score=631.21 Aligned_cols=474 Identities=24% Similarity=0.417 Sum_probs=401.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC-CCEEEEEEEEHHHHHH
Q ss_conf 999999999998720355303579999999999999999999986308888189998631348-5405466522588999
Q gi|254780866|r 10 TFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWID-YFCSYHLGVDGISILL 88 (499)
Q Consensus 10 i~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~iD~ls~~f 88 (499)
+..|+++.++..+.++.++..-.|.. ..+....+.....+.-...+++. ..+..+|.| .++||.+++||++.+|
T Consensus 6 ilp~~~a~~IpIly~~~~rih~gWFv--l~~plV~F~y~l~L~p~t~sGgv---~h~ti~WvP~lG~NFtly~DGl~lLF 80 (809)
T TIGR00940 6 ILPLLLALLIPILYKYDKRIHIGWFV--LAIPLVLFLYTLSLLPITASGGV---VHKTIDWVPELGLNFTLYLDGLALLF 80 (809)
T ss_pred EHHHHHHHHHHHHCCCCCCHHHHHHH--HHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 07899999988744222320246889--99999999999976556515960---21015877667874213442589999
Q ss_pred HHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-CCCCCC
Q ss_conf 9999999999997520112---100235678999863024302654043311123431034312355312343-323210
Q gi|254780866|r 89 VVLTTFLTPFCILSSWKSI---QENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS-ERIYAA 164 (499)
Q Consensus 89 ~~l~~~i~~l~~~ys~~~~---~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~-~~~~aa 164 (499)
..+++.++.++.+||..|+ +|+.++||.++++++++|+|+++|+|++.+|+|||+++++|++||++|.++ ++.++|
T Consensus 81 slLItgIG~LVvLYsiyYlskk~e~l~nFy~ylL~FMGaMLGVVLSdNlI~LyvFWELTS~~SfLLIsyW~hr~~s~ygA 160 (809)
T TIGR00940 81 SLLITGIGVLVVLYSIYYLSKKEEKLPNFYVYLLLFMGAMLGVVLSDNLIVLYVFWELTSLASFLLISYWFHREKSRYGA 160 (809)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998899999999877753012676169999999953565467877899999999999999999988887468888998
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC--CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 001135544556776665544321000100344321013--303789999854103444554000232010100022223
Q gi|254780866|r 165 YKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKF--PFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTA 242 (499)
Q Consensus 165 ~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~--~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~ 242 (499)
.|-++++..|+.-++.|+++++.-+||++++++.+..+. +.+.-..+.+++++|..+|+||||||.||||+ +|||||
T Consensus 161 qksl~ITvfGGlamlgG~ill~~itgsfsi~~~i~~adai~nsplf~~am~LvllGAfTKSAQFPFhiWLPdA-MeAPTP 239 (809)
T TIGR00940 161 QKSLLITVFGGLAMLGGLILLAVITGSFSIDAVIESADAIRNSPLFLTAMVLVLLGAFTKSAQFPFHIWLPDA-MEAPTP 239 (809)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH-CCCCCC
T ss_conf 7543464323689999999885751632399999611354205238999999999876542038755478021-168584
Q ss_pred CCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 443333-2322333211100001112233100000000012222212211100002443223321001354023331048
Q gi|254780866|r 243 GSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSG 321 (499)
Q Consensus 243 ~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~ 321 (499)
|||+|| ++++|+|+|.+.|+- |++. +.+.|-|.+...|++|..+|++.|.+|+|+|-+||||||||.|.|+.-+++|
T Consensus 240 VSAYLHSATMVKAGlyL~aR~t-Pvfa-gt~~WfW~v~l~GliTL~wgs~~A~~QqDLKgiLAfSTiS~LGlI~~llglG 317 (809)
T TIGR00940 240 VSAYLHSATMVKAGLYLVARLT-PVFA-GTEAWFWIVALVGLITLLWGSLSAVKQQDLKGILAFSTISQLGLIMVLLGLG 317 (809)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 0276766799998899888761-1202-7557999999999999999999876676667788898885899999999623
Q ss_pred CC---------------CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCC
Q ss_conf 75---------------422102345554210233303567777642001111002355654202332013455553010
Q gi|254780866|r 322 MK---------------SGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGL 386 (499)
Q Consensus 322 ~~---------------~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~ 386 (499)
.+ .+..+|+||++||+-+|+.|||.+|.+-|.+||||+||+|||..-||.++..-+++..||+|+
T Consensus 318 s~~~Hy~~~DSmiK~YA~A~~AAvFHliNHATFKgsLFM~~GiiDHetGTRDirkLGGL~~iMPitfT~~~i~~aaMAGv 397 (809)
T TIGR00940 318 SASLHYDGDDSMIKIYALAAVAAVFHLINHATFKGSLFMAAGIIDHETGTRDIRKLGGLLAIMPITFTVALIASAAMAGV 397 (809)
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 03215488723899999999999998886578768887551502458886157652650104468999999999984477
Q ss_pred HHHHHHCCHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCHHHH
Q ss_conf 2444311228999999986-----------5999999999999999999999999972889876-555687889126899
Q gi|254780866|r 387 PGTSGFIGEFLVIMSVFQN-----------SNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCE-KVQQLKDLSLRERCM 454 (499)
Q Consensus 387 Pp~~GF~~k~~i~~~~~~~-----------~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~ 454 (499)
||++||.||.+-++++++. ++...+++.++++.+..|++|.+.++|+|++|+| -+++.+|.|..|+.+
T Consensus 398 PpfNGFLSKEmFf~~~~~a~~~n~f~~~T~GyLFP~~a~vasvFtfvYs~~fi~~~FfG~~Kpe~lp~k~HE~p~~Ml~s 477 (809)
T TIGR00940 398 PPFNGFLSKEMFFAEAITASLVNLFDVETLGYLFPVVAIVASVFTFVYSLKFIFRVFFGRYKPEDLPKKAHEAPILMLLS 477 (809)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCC
T ss_conf 53342112788888888875157422025667877999999999999999999865168856012679888776075306
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf 9999999999977248899999999999985202002
Q gi|254780866|r 455 VYPIAVLTVFFGIYPVPIRDTFSVPLSSIIENYTLKT 491 (499)
Q Consensus 455 ~~~l~~~~i~lGi~p~~~~~~~~~~~~~l~~~~~~~~ 491 (499)
..+|..+++..|++|..+.+.+-.++..-+++++...
T Consensus 478 p~iL~~lv~vfGlfP~~l~~~iiepAv~sil~~~v~d 514 (809)
T TIGR00940 478 PAILALLVVVFGLFPALLTGSIIEPAVLSILREDVID 514 (809)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 8889888887540024576337888888762378878
No 38
>PRK06277 hydrogenase subunit F; Validated
Probab=100.00 E-value=0 Score=627.50 Aligned_cols=468 Identities=18% Similarity=0.256 Sum_probs=394.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCEEEEEEEEECCCCCEEEEE
Q ss_conf 98307899999999999999872035530357999999999999999999998-63088881899986313485405466
Q gi|254780866|r 1 MNLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWS-VFDKGRSSFQMIEYYHWIDYFCSYHL 79 (499)
Q Consensus 1 m~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (499)
||+ |++++++|+++++++.+.+.+ +|..+..+...+....+.+..... .+..++... ...|. .++.+
T Consensus 1 m~l--L~l~v~~Pl~~a~li~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~---~~i~~ 68 (479)
T PRK06277 1 MNL--LPLMVVFPMICAIIFNLLHGK---DKLIKPLTLLTAILLPILPFIGSYGIYFFGGHGP----ENGLH---SGITY 68 (479)
T ss_pred CCH--HHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH----HHCCC---CCCEE
T ss_conf 976--899999999999999996795---5899999999999999999999988772554106----54035---67010
Q ss_pred EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 52258899999999999999975201121002356789998630243026540433111234310343123553123433
Q gi|254780866|r 80 GVDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSE 159 (499)
Q Consensus 80 ~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~ 159 (499)
..|.++..+..+++.++.+...+++++ +++.++|+.+++++.++++|+++|+|++++|++||++++++|.|+.+|++++
T Consensus 69 ~~d~l~~~~~~~~~l~~~l~~~~~~~~-~~~~~~f~~l~l~~~~~~~g~~~s~dl~~~fvf~E~~~i~sy~Li~~~~~~~ 147 (479)
T PRK06277 69 LYGPAKQLIITVLMLIASLVLITGLGE-KKSSGLYVALMLMGLASVSAIVLADDIFNIYVFFEIAAIAQVGLVIASGTEK 147 (479)
T ss_pred EECHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 453066999999999999999999510-3467889999999999999999997899999999999999999999779899
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC--HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 232100011355445567766655443210001003443210133--037899998541034445540002320101000
Q gi|254780866|r 160 RIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFP--FSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHV 237 (499)
Q Consensus 160 ~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~--~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~ 237 (499)
+.||+.||++++.+|+.++++|+.++|..+||+|+.++......+ .........++++|++.|++++|||.|+||+|+
T Consensus 148 ~~~aa~ky~i~~~~gs~~~L~gi~~ly~~tgs~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~l~PfH~Wlpday~ 227 (479)
T PRK06277 148 AYRTALKYMILGNVAGSILLLGIAFLLAATGTLNISDMHNFLLNNPTTPTIYGGLLMLIIGLLYGSGLPPFHTVKADIYA 227 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHC
T ss_conf 99999999999999999999999999999679579999999871964089999999999999999874234214033407
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC--CCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHH
Q ss_conf 222234433332322333211100001112233--100000000012222212211100002443223321001354023
Q gi|254780866|r 238 QAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLA--SQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVT 315 (499)
Q Consensus 238 ~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~--~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~ 315 (499)
++|+++|+++++. .|.+.+...++...+++.. ...+.+.+.++|++|+++|++.|++|+|+||++|||||+|+||++
T Consensus 228 ~ap~~~salLs~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~tii~g~l~Al~Q~dlKrllAYSSIs~~Gyi~ 306 (479)
T PRK06277 228 KAKPFGSALLQTY-SKFVLVALMLVIFKLFGGLSYFASAQGVLIALSVLAMVFGVVMALLQTDYKKLLAYHAISQGGYVA 306 (479)
T ss_pred CCCHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 6867999999999-999999999999997022444689999999999999999999999712468888887899999999
Q ss_pred HHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCH
Q ss_conf 33104875422102345554210233303567777642001111002355654202332013455553010244431122
Q gi|254780866|r 316 IGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGE 395 (499)
Q Consensus 316 ~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k 395 (499)
++++.+++.+.+++++|+++|+++|+.+|+ +|.+++++|++|++|++|+.|+||.++.++.++.+|++|+||++||+||
T Consensus 307 lgi~~~~~~~~~gai~~~i~h~~~k~~LFl-~g~i~~~~~~~~i~~l~Gl~~~~P~~a~~~~i~~lsl~GiPp~~GF~sK 385 (479)
T PRK06277 307 AGLALGTPLGIVAGIFHAINHVIYKSALFL-GAHIVYRTKEGNLNKLGGLLPVMPAVAFMVLCAKLAISGVPPFNGFQSK 385 (479)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999837688899999999999999999999-9999995598529986281867799999999999999866664279999
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999865-999999999999999999999999972889876555--687889126899999999999997724889
Q gi|254780866|r 396 FLVIMSVFQNS-NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQ--QLKDLSLRERCMVYPIAVLTVFFGIYPVPI 472 (499)
Q Consensus 396 ~~i~~~~~~~~-~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~ 472 (499)
+++++++++.+ +++.++..+++++++.|++|.++++|+++.++|+.+ +.+|.++.|..++.+++++++.+|++|+++
T Consensus 386 ~~i~~~a~~~~~~~l~~~~~~~sv~~~~y~lr~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l~i~~Gi~P~~~ 465 (479)
T PRK06277 386 LLLAQAAMNVNMPELAIIMIIVSIGTFVSMMKAFYLIYLKPCPEEQLEEYKKAKVPKYAVFSLVVLTILCIILGICPDLV 465 (479)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999838799999999999999999999999996088885433334667898879999999999999999633999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254780866|r 473 RDTFSVPLSSI 483 (499)
Q Consensus 473 ~~~~~~~~~~l 483 (499)
.|.++++++++
T Consensus 466 l~~i~p~~~~l 476 (479)
T PRK06277 466 TNIIYPFANEI 476 (479)
T ss_pred HHHHHHHHHHH
T ss_conf 99899999986
No 39
>PRK08676 hydrogenase membrane subunit; Validated
Probab=100.00 E-value=0 Score=623.83 Aligned_cols=444 Identities=24% Similarity=0.355 Sum_probs=383.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 30357999999999999999999998630888818999863134854054665225889999999999999997520112
Q gi|254780866|r 28 CGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSI 107 (499)
Q Consensus 28 ~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~ 107 (499)
+..|..+..+..-+.+....++.... ....++++.. +-.+.+|++|.++..++++++.++.+||.+|+
T Consensus 19 ~~~~~~~~~~~~~~l~~~~~sl~~l~--~~~~~~~~~~----------~~~~~iD~Ls~~~l~l~~~v~~l~~lyS~~Ym 86 (486)
T PRK08676 19 RSHRLLNALAVGHGLWHLGLSLYVLL--VLPLPGYFME----------SRYLFIDHLGLFVVLIASLIFILAALYARGYV 86 (486)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH--HCCCCCHHCC----------CCHHEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 86767799999999999999999997--3564210035----------72221666169999999999999999988885
Q ss_pred C----------CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 1----------002356789998630243026540433111234310343123553123433232100011355445567
Q gi|254780866|r 108 Q----------ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIF 177 (499)
Q Consensus 108 ~----------~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~ 177 (499)
+ ++.++||.+++++..++++++.|+|++++|++||++++++|.||++|+++++.+|+.||++++..++.+
T Consensus 87 ~~~~~~~~~~~~~~~~fy~l~~l~~~~m~~~~~s~nl~~fyvf~E~~~i~s~~LI~~~~~~~~~~Aa~ky~~~~~~~~~~ 166 (486)
T PRK08676 87 DHLLESGELDPENLKVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAMIF 166 (486)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 11410245687546699999999999999999995899999999999999999997579899999999999999999999
Q ss_pred HHHHHHHHHHHH------CCCCHHHHHHHHC-CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 766655443210------0010034432101-330378999985410344455400023201010002222344333323
Q gi|254780866|r 178 MLFAIVVMCWEK------KTSSIIDLYAMSK-FPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGI 250 (499)
Q Consensus 178 lL~g~~~l~~~~------gs~~~~~~~~~~~-~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~ 250 (499)
.++|+.++|..+ |++|+.++....+ .+.....+.+.++++|+++|+|++|||.|+||+|+|||+|+|+++|++
T Consensus 167 ~l~g~~~l~~~~~~~~~~gtl~~~~l~~~~~~~~~~~~~~~~~l~ligf~~K~~~~PfH~WLPdA~~eAPtpvSalLsav 246 (486)
T PRK08676 167 AFIGLIFLFELTRQALGTGTLNWTELAAHASLLSPGMLGASFLFIFIGFAAKSGIVPFHTWLPAAYAKAPSAVSAVLSGT 246 (486)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 99999999999998725786039999976313785899999999999999987151215650676678994799999999
Q ss_pred CCCCCCCCCCHHCCCCCCC-CCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCH
Q ss_conf 2233321110000111223-310000000001222221221110000244322332100135402333104875422102
Q gi|254780866|r 251 MLKMGGYGCIRFLLPLFPL-ASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGA 329 (499)
Q Consensus 251 ~~k~g~~~l~r~~~~l~~~-~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~ 329 (499)
++|+|+|+++|+.....+. ..+++...+.++|++|+++|++.|++|+|+||++|||||+|+||++++++.+++.+..++
T Consensus 247 l~k~G~y~i~R~~~~~~~~~~~~~~~~~l~~lg~~tii~g~~~Al~Q~DlKrlLAYSSIshmG~i~lg~~~gt~~~~~ga 326 (486)
T PRK08676 247 VLNIGIYGILRMSALLRQSGAAEQVSNVLIVFGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWA 326 (486)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 99999999999999862302489999999999999999999999987116799999799999999999996739999999
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 34555421023330356777764200111100235565420233201345555301024443112289999999865999
Q gi|254780866|r 330 MFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSNTV 409 (499)
Q Consensus 330 ~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~~~ 409 (499)
++|+++|+++|+++|+++|.+++++|+||++|+||+.|++|+++.++.++.+|++|+||++||+||+.++.+..+.+.|.
T Consensus 327 l~~~i~H~l~k~~LFl~aG~i~~~~gt~~i~~l~GL~~~mP~~a~~~~i~~lsl~GlPP~~gF~sK~~i~~~~~~~~~~~ 406 (486)
T PRK08676 327 LFHMLAHSLVKAGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGAISVWL 406 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999749976998659886638999999999999987767545999999999999876799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999972889876--55568788912689999999999999772-488999999999999
Q gi|254780866|r 410 AVLASFGVVLSALYSLWLYRKVVFGVSKCE--KVQQLKDLSLRERCMVYPIAVLTVFFGIY-PVPIRDTFSVPLSSI 483 (499)
Q Consensus 410 ~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~l~~~~i~lGi~-p~~~~~~~~~~~~~l 483 (499)
.....+...+++.++.+.+.+++.+..+++ +.++.+|.++.+..|+.++++.++.+|+| |+++.+.+++.++.+
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~m~~p~~iLa~l~l~lGv~~p~~l~~~l~~~~~~l 483 (486)
T PRK08676 407 VLAVLLLLLLAASSFANFLLKAFTRSTPEEENRDPVPYRTPLSMKVPIVILLALVLALGVYFPPGLADFLDQIVKEL 483 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999557788777888877686318999999999999999664467999999999983
No 40
>CHL00025 ndhF NADH dehydrogenase subunit 5
Probab=100.00 E-value=0 Score=615.59 Aligned_cols=458 Identities=21% Similarity=0.371 Sum_probs=387.0
Q ss_pred CHHHHHHHHHHHHHHHHHH----HH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC---CCE
Q ss_conf 0789999999999999987----20-355303579999999999999999999986308888189998631348---540
Q gi|254780866|r 4 PFLSIVTFLPFLGVFVILF----SS-YLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWID---YFC 75 (499)
Q Consensus 4 p~l~lii~lPll~~li~~~----~~-~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 75 (499)
...++++++|++++++..+ .+ ..+..+|....++.....+.++.+..+......+....+. .+.|++ ..+
T Consensus 6 ~~~wlip~~Pl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~--~~~w~~~~~~~~ 83 (738)
T CHL00025 6 QYAWIIPFLPLPVSMLIGLGLLLFPTATKNLRRMWAFLSILLLSIVMIFSLNLSIQQINGSSIYQY--LWSWTINNDFSL 83 (738)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE--EEEEEEECCEEE
T ss_conf 777999998799999999999852221333131999999999999999999999999649982799--876177588616
Q ss_pred EEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEE
Q ss_conf 546652258899999999999999975201121--002356789998630243026540433111234310343123553
Q gi|254780866|r 76 SYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIG 153 (499)
Q Consensus 76 ~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~ 153 (499)
++++.+|++|..+..+++.++.++.+||.+|++ ++..||+.+++++..+|++++.|+|++++|++||++++|+|.||+
T Consensus 84 ~~~~~~D~ls~~m~~~vt~v~~lv~iYS~~Ym~~d~~~~rff~~l~lf~~~ml~lv~s~nl~~~fv~wE~~gl~SylLIg 163 (738)
T CHL00025 84 EFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIG 163 (738)
T ss_pred EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHE
T ss_conf 88889736889999999999999999958971799980579999999999999999947499999999999999878411
Q ss_pred ECCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC-------CCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 12343-32321000113554455677666554432100010034432101-------33037899998541034445540
Q gi|254780866|r 154 VWGGS-ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSK-------FPFSIQYWMWIAFFCSFAIKIPM 225 (499)
Q Consensus 154 ~~~~~-~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~-------~~~~~~~~~~~ll~~g~~~K~~~ 225 (499)
+|.++ ++.+|+.||++++++|+..++.|+..+|..+||+|++++.+..+ .+......+.+++++|...|+||
T Consensus 164 f~~~~~~a~~aa~kafi~~riGd~~~l~gi~~l~~~~gt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~KsAq 243 (738)
T CHL00025 164 FWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQ 243 (738)
T ss_pred EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 32388578899999999997999999999999999985877999999998765426766799999999999999987430
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCC
Q ss_conf 0023201010002222344333-323223332111000011122331000000000122222122111000024432233
Q gi|254780866|r 226 FPFHTWLPNAHVQAPTAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIA 304 (499)
Q Consensus 226 ~PfH~WlP~~y~~ap~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllA 304 (499)
+|+|.||||++ |+|||+||++ +++++|+|+|.+.|+. +++.. .+....++.++|.+|+++|+..|+.|+|+||++|
T Consensus 244 ~Plh~WLPdAm-~~PTPvSAlihaatmV~aGvyl~~R~~-~~~~~-~p~~~~~v~~ig~~T~~~~a~~a~~q~DiKr~LA 320 (738)
T CHL00025 244 FPLHVWLPDAM-EGPTPISALIHAATMVAAGIFLVARLL-PLFIV-IPYIMNLISLIGIITALLGATLALAQKDIKRGLA 320 (738)
T ss_pred CCCCCCCCHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 75500250320-599708899988789884476563472-67650-6899999999999999999999986887888888
Q ss_pred CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH---------HCCCCCCHHHHHHHHHHCCCCC
Q ss_conf 2100135402333104875422102345554210233303567777642---------0011110023556542023320
Q gi|254780866|r 305 YSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDR---------LHTRDIFAYGGLVHNMPRYAVV 375 (499)
Q Consensus 305 ySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~---------~g~~~l~~l~Gl~~~~P~~~~~ 375 (499)
|||+||+|||+++++.+. +.++++|+++|+++|+.||+++|.+.+. ++++|+++|||+.|+||++..+
T Consensus 321 yST~sQlGym~~~~g~g~---~~aa~~Hl~~Ha~fKalLFl~aGsvih~~~~~~~~~~~~~qd~~~mgGl~k~mP~t~~~ 397 (738)
T CHL00025 321 YSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTT 397 (738)
T ss_pred HHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHHH
T ss_conf 758988899999646995---89999999999999999998888999971021245767770488864945586699999
Q ss_pred HHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC----------------
Q ss_conf 1345555301024443112289999999865999999999999999999999999972889876----------------
Q gi|254780866|r 376 MMVFTMANMGLPGTSGFIGEFLVIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCE---------------- 439 (499)
Q Consensus 376 ~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~---------------- 439 (499)
|.++.+|++|+||++||+||+.|++++++.++++.+++.++..+++.|+.|.+..+|+|+.|.+
T Consensus 398 f~ig~lal~GiPp~~GF~SKd~Il~~a~~~~~~l~~~~~~tA~lTAFYm~Rl~fltF~G~~R~~~~~~~~~~~~~~~~~~ 477 (738)
T CHL00025 398 FLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSIS 477 (738)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 99988998268641258769999999987462999999999999999999999822478665322324567778642033
Q ss_pred -----------------------------------------------------CCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf -----------------------------------------------------555687889126899999999999997
Q gi|254780866|r 440 -----------------------------------------------------KVQQLKDLSLRERCMVYPIAVLTVFFG 466 (499)
Q Consensus 440 -----------------------------------------------------~~~~~~~~~~~~~~~~~~l~~~~i~lG 466 (499)
...+.+|.|+.|..|+.+|++.++..|
T Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pHESP~~MtlPLiILAi~Sv~~G 557 (738)
T CHL00025 478 LWGKEESKKLNKLLPLLTMNNNEGVSFFSKKKYKIDGNVRNMTRPFSHFGNKKTFSYPHESDNTMLFPLLVLLLFTLFIG 557 (738)
T ss_pred HHHCCHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 43010033320230123125654433000122334543223566665666667878877874024899999999999997
Q ss_pred HHH
Q ss_conf 724
Q gi|254780866|r 467 IYP 469 (499)
Q Consensus 467 i~p 469 (499)
+..
T Consensus 558 ~ig 560 (738)
T CHL00025 558 FIG 560 (738)
T ss_pred HHC
T ss_conf 621
No 41
>COG1009 NuoL NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=0 Score=615.16 Aligned_cols=458 Identities=27% Similarity=0.469 Sum_probs=397.4
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCC-EEEEEEEEHHH
Q ss_conf 99999999999999872035530357999999999999999999998630888818999863134854-05466522588
Q gi|254780866|r 7 SIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYF-CSYHLGVDGIS 85 (499)
Q Consensus 7 ~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~iD~ls 85 (499)
.+++++|++++++..+... ..+|....+........+..+.........++.. ...+.|.+.. .++.+++|++|
T Consensus 2 ~l~~~lPli~~li~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~---~~~~~W~~~~~~~~~~~iD~Ls 76 (606)
T COG1009 2 LLIILLPLIGALIALLLGR--TGRRLAAWLALLAPLVSLLLSALILFIVLAGPVL---VTLYTWLPSGGLNFGLRIDGLS 76 (606)
T ss_pred CHHHHHHHHHHHHHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE---EEEEEEEEECCCEEEEEECHHH
T ss_conf 0799999999999998443--0244305888999999999999999998059841---5888866507831689975678
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-CCCC
Q ss_conf 99999999999999975201121--00235678999863024302654043311123431034312355312343-3232
Q gi|254780866|r 86 ILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS-ERIY 162 (499)
Q Consensus 86 ~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~-~~~~ 162 (499)
..|..+++.+++++.+|+.+|++ ++.+|||.+++++.++|.+++.|||++.+|++||+++++||.||++|.++ ++++
T Consensus 77 ~lm~~lVt~vg~LI~iYsi~YM~~d~~~~RFfa~l~lF~~sMl~lVlSdNll~l~~~WE~~gl~SyLLIGfw~~~~~a~~ 156 (606)
T COG1009 77 LLMALLVTGVGFLIHLYSIGYMSHDPGLGRFFAYLLLFTGSMLGLVLSDNLLLLFVFWELTGLASYLLIGFWYSRPSARR 156 (606)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf 99999999999999999799824599857099999999999999998285999999999999998872000269853669
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHH---CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1000113554455677666554432100-01003443210---1330378999985410344455400023201010002
Q gi|254780866|r 163 AAYKFFLYTFFGSIFMLFAIVVMCWEKK-TSSIIDLYAMS---KFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQ 238 (499)
Q Consensus 163 aa~ky~i~~~~~s~~lL~g~~~l~~~~g-s~~~~~~~~~~---~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ 238 (499)
+|.|.++.+++|+..++.|+..+|..+| +.+.+++.+.. +........+.++++.|...|+||||||.||||+ +|
T Consensus 157 aA~kAflvtrvGdl~ll~gi~~L~~~~G~~~~~~~l~~~~~~~~~~~~~~~~~~lll~~Ga~~KSAQfPfH~WLpdA-Me 235 (606)
T COG1009 157 AARKAFLVTRVGDLGLLLGIILLYLLTGTTLLSEELFAAALFADISPPLLTLILLLLLLGAFGKSAQFPFHTWLPDA-ME 235 (606)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH-HC
T ss_conf 99887430112689999999999999576301788862110112111289999999999863663306037655366-44
Q ss_pred CCCCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHH
Q ss_conf 222344333-3232233321110000111223310000000001222221221110000244322332100135402333
Q gi|254780866|r 239 APTAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIG 317 (499)
Q Consensus 239 ap~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~ 317 (499)
+|||+||++ +++++|+|+|.+.|.. |++.. .+.+.+.+..+|.+|+++|+..|++|+|+||++||||+||+|||+++
T Consensus 236 gPTPVSAliHaATMV~AGvyLvaR~~-pif~~-sp~~~~~v~~vG~iTal~~a~~al~Q~DiKriLAYSTiSQLG~m~~a 313 (606)
T COG1009 236 GPTPVSALLHAATMVKAGVYLLARLS-PLFAL-SPEALWLVILVGAVTALLAALIALVQNDIKRILAYSTISQLGYMFVA 313 (606)
T ss_pred CCCHHHHHHHHHHHHHCCHHHHHHHH-HHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89849999998688971625796887-87535-78999999999999999999999999999999999889999999999
Q ss_pred HCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHH
Q ss_conf 10487542210234555421023330356777764200111100235565420233201345555301024443112289
Q gi|254780866|r 318 IFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFL 397 (499)
Q Consensus 318 l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~ 397 (499)
++.+. .++.++++|+++|+++|+.||+++|.+.+++|+||++++||++|+||.+..+++++.++++|+||++||+||..
T Consensus 314 ~Glg~-~a~~aAifHL~tHA~FKA~LFL~aG~vih~~~trdi~kmggL~k~mPit~~~~~ig~lalaGvpPf~GF~SK~~ 392 (606)
T COG1009 314 LGLGS-LAYEAAIFHLVTHAFFKALLFLSAGSVIHATGTRDIRKLGGLRKKMPITFVAFLIGALALAGVPPFAGFFSKDM 392 (606)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHCHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf 84427-79999999999999999999984150388716540887416787663999999999999817873206999999
Q ss_pred HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHH-HHHHH
Q ss_conf 999999865----99999999999999999999999997288987655-5687889126899999999999997-72488
Q gi|254780866|r 398 VIMSVFQNS----NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKV-QQLKDLSLRERCMVYPIAVLTVFFG-IYPVP 471 (499)
Q Consensus 398 i~~~~~~~~----~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~l~~~~i~lG-i~p~~ 471 (499)
+++++++.+ .+....+.++..+++.|.+|.+..+|+|++++++. ++.+|.++.+..|+.++.+.++.+| +..++
T Consensus 393 i~~~~~~~~~~~~~~~~~~~~i~~~~T~~ys~r~~~~~F~g~~~~~~~~~~~he~p~~m~lp~~iL~~~s~~~G~~~~~~ 472 (606)
T COG1009 393 ILEAALAASHLSGGLLLLLALIGALLTAFYSFRLIFLVFFGKPREPEELPHAHEAPWVMLLPLVVLAILSLILGLLILAP 472 (606)
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999972543333899999999999999999999951478998744466778898104598999999999999987656
Q ss_pred HH
Q ss_conf 99
Q gi|254780866|r 472 IR 473 (499)
Q Consensus 472 ~~ 473 (499)
..
T Consensus 473 ~~ 474 (606)
T COG1009 473 FL 474 (606)
T ss_pred HH
T ss_conf 53
No 42
>PRK06589 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=615.57 Aligned_cols=456 Identities=20% Similarity=0.298 Sum_probs=372.7
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEEHHH
Q ss_conf 89999999999999987203553035799999999999999999999863088881899986313485405466522588
Q gi|254780866|r 6 LSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLGVDGIS 85 (499)
Q Consensus 6 l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iD~ls 85 (499)
+...+++|+......... +++++.+..+....+...+ .+......+...+...+. +...+ ...++++++|++|
T Consensus 13 l~~~~li~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~--~~~~i~~~iD~ls 85 (484)
T PRK06589 13 LLSTLLVGALNLTSPFAT---KKDSFIRNFLLITISIFFF-GNILLIDLLFLKGIRAQF-ELMIF--GNYSIGLHLEPLG 85 (484)
T ss_pred HHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCEEE-EEECC--CCEEEEEEECHHH
T ss_conf 999999999999999981---8877789999999999999-999999999723774068-98506--8824897760556
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCC----HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCC
Q ss_conf 999999999999999752011210----0235678999863024302654043311123431034312355312343323
Q gi|254780866|r 86 ILLVVLTTFLTPFCILSSWKSIQE----NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERI 161 (499)
Q Consensus 86 ~~f~~l~~~i~~l~~~ys~~~~~~----~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~ 161 (499)
..|..+++.++.++.+||.+|+++ +.+||+.+++++..++++++.|+|++++|++||++++++|.|+++|+++++.
T Consensus 86 ~~~~ll~~~v~~lv~iyS~~Ym~~~~~~~~~rf~~~~~l~~~~~~~lv~s~dL~~lfvf~El~~i~sy~LI~~~~~~~~~ 165 (484)
T PRK06589 86 LIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLLTMFVCYELLTISTAFLIGHTRNNISL 165 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 99999999999999999888731277777448999999999999999997069999999999999999999828988999
Q ss_pred CCCCHHHHHHHH-HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 210001135544-5567766655443210001003443210133037899998541034445540002320101000222
Q gi|254780866|r 162 YAAYKFFLYTFF-GSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAP 240 (499)
Q Consensus 162 ~aa~ky~i~~~~-~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap 240 (499)
+++.||+.++.. |+.+++.|+..+|..+|++|+.+...... .+.....++++|+..|+|++|||.|+||+|+ +|
T Consensus 166 ~aa~ky~~~~~~~~~~~ll~gi~lly~~~gtl~~~~~~~~~~----~~~~~~~ll~i~~~~K~a~fP~H~WLPdA~~-ap 240 (484)
T PRK06589 166 IGGYKYLKILMISALLLFLPAVILIYQKTGNLDFVSGGIFSK----NQSIILLLMFIFGIAKTAIFPVHSWLPAAMV-AH 240 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHHHHCCCCCCCCHHCC-CC
T ss_conf 999999999999999999999999999983699998886321----0899999999999999706678675221205-68
Q ss_pred CCCCCCCCC-CCCCCCCCCCCHHCCCCCCCCC----CCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHH
Q ss_conf 234433332-3223332111000011122331----00000000012222212211100002443223321001354023
Q gi|254780866|r 241 TAGSVFLAG-IMLKMGGYGCIRFLLPLFPLAS----QYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVT 315 (499)
Q Consensus 241 ~~~salls~-~~~k~g~~~l~r~~~~l~~~~~----~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~ 315 (499)
+|+|+++++ +++|+|+|+++|+....++... ....+++.++|.+|+++|++.|++|+|+||++||||++|+||++
T Consensus 241 tpvsall~aa~~vkaGvy~l~R~~~~~f~~~~~~~~~~~~~~l~~lg~iTii~ga~~Al~Q~DlKrlLAYSsisq~Gyi~ 320 (484)
T PRK06589 241 YPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLAL 320 (484)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 67999999999999999999999999615126888899999999999999999999999988899999874787799999
Q ss_pred HHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCH
Q ss_conf 33104875422102345554210233303567777642001111002355654202332013455553010244431122
Q gi|254780866|r 316 IGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGE 395 (499)
Q Consensus 316 ~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k 395 (499)
++++.+++.|+.++++|+++|+++|+++|+++|.+++++|++|++|+||+.|+||+++.++.++.+|++|+||++||+||
T Consensus 321 lgi~~~~~~~~~gal~hli~Ha~~Ka~LFl~aG~i~~~~~~~~i~~l~GL~~~~P~t~~~~~i~~lsl~GiPp~~GF~sK 400 (484)
T PRK06589 321 LSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGISKSFPLISFMISISSLSLIGIPIFSGFISK 400 (484)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99997454778999999999999999999999999980586359996797866489999999999999876664569999
Q ss_pred HHHHHHHHHHHHH-H----HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8999999986599-9----9999999999999999999999728898765556878891268999999999999977248
Q gi|254780866|r 396 FLVIMSVFQNSNT-V----AVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPV 470 (499)
Q Consensus 396 ~~i~~~~~~~~~~-~----~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~ 470 (499)
|++++++++++.+ . .....+++.+++.|++|.++++|+++++ +..+.+|.|+.+..|+.+++..++.+|+.|+
T Consensus 401 ~~i~~a~~~~~~~~~~~~~~~~~~~~s~l~~~y~~ri~~~~f~~~~~--~~~~~~e~P~~m~ip~~ila~~~il~~~~~~ 478 (484)
T PRK06589 401 FSILLAASEQNQPWLSIIVMLVVIASSILSALYLLKILSSIYKPSLS--ENVVTKKLPYSLQLSIIICAGATTLFYFIQI 478 (484)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999859816999999999999999999999999999689985--4488888868379999999999999982388
Q ss_pred HHHHH
Q ss_conf 89999
Q gi|254780866|r 471 PIRDT 475 (499)
Q Consensus 471 ~~~~~ 475 (499)
++.+.
T Consensus 479 ~~~~f 483 (484)
T PRK06589 479 LIREF 483 (484)
T ss_pred HHHHH
T ss_conf 78740
No 43
>MTH00210 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=608.26 Aligned_cols=457 Identities=21% Similarity=0.339 Sum_probs=391.1
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCC---CEEEEEEEEH
Q ss_conf 9999999999999987203553035799999999999999999999863088881899986313485---4054665225
Q gi|254780866|r 7 SIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDY---FCSYHLGVDG 83 (499)
Q Consensus 7 ~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~iD~ 83 (499)
.+++++|++++++..+.++.. ++|....++.....++.+.+...+.....+.. ....+.+.|++. ..++++.+|+
T Consensus 3 lLii~lPLi~ali~~l~gr~~-~~~~~~~i~~~~~~~s~lls~~~~~~~~~~~~-~~~~~l~~w~~~~~~~~~~~~~~D~ 80 (618)
T MTH00210 3 ILVLFFPLLSAIISGLFGRKI-GTKGAGVLTSSCIVISAIVSCCIFYETTLNSS-VTYIKLWRWFDSELLTTYFGLQFDS 80 (618)
T ss_pred HHHHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CEEEEEECCCCCCCCCEEEEEEEHH
T ss_conf 999999999999999807876-62179999999999999999999999834798-0799862053356767157755326
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-CC
Q ss_conf 88999999999999999752011210--0235678999863024302654043311123431034312355312343-32
Q gi|254780866|r 84 ISILLVVLTTFLTPFCILSSWKSIQE--NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS-ER 160 (499)
Q Consensus 84 ls~~f~~l~~~i~~l~~~ys~~~~~~--~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~-~~ 160 (499)
+|..+..+++.++.++.+||.+|+++ +.+||+.+++++..+|++++.|+|++++|++||.+++++|.||++|+++ ++
T Consensus 81 ls~~m~~~v~~is~lv~iYS~~Ym~~d~~~~rf~~~l~lf~~~Ml~lv~s~nl~~lfvgWE~vgl~SylLI~~~~~~~~a 160 (618)
T MTH00210 81 LTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKA 160 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 38999999999999999999998168998028999999999999999997249999999999999999999750886889
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC--CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3210001135544556776665544321000100344321013--30378999985410344455400023201010002
Q gi|254780866|r 161 IYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKF--PFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQ 238 (499)
Q Consensus 161 ~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~--~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ 238 (499)
.+|+.||++++++|+..++.|+..+|..+||+|+.++.+..+. +.....+...++++|+..|+|++|||.||||++ |
T Consensus 161 ~~aa~ka~i~nrvGd~~lllgi~~l~~~~Gtl~~~~l~~~~~~~~~~~~~~~i~~ll~iga~~KsAqfPlh~WLPdAm-~ 239 (618)
T MTH00210 161 NKAAIKAMLVNRVGDIGLVLAMIKILKEFGSLEFSTIYSLLSLVINKESITIICLLLFVGAVGKSAQLGLHTWLPDAM-E 239 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH-C
T ss_conf 999999999997879999999999999967861999999987402764599999999999999845065465226774-5
Q ss_pred CCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHH
Q ss_conf 2223443333-232233321110000111223310000000001222221221110000244322332100135402333
Q gi|254780866|r 239 APTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIG 317 (499)
Q Consensus 239 ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~ 317 (499)
+|||+||+++ ++++|+|+|.++|.. +++. ..+.+...+.++|.+|+++|++.|+.|+|+||++||||+||+|||+++
T Consensus 240 aPTPVSALlhaatmV~aGvyll~R~~-~l~~-~~~~~~~~v~~~G~~T~~~~~~~Al~Q~DiKrilAySTiSQlGym~~~ 317 (618)
T MTH00210 240 GPTPVSALIHAATMVTAGVFLIIRSG-PLFE-GSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMV 317 (618)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHH-HHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89961499999999998999885541-7753-178999999999999999999999978637788643159888899999
Q ss_pred HCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC-CCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHH
Q ss_conf 10487542210234555421023330356777764200-11110023556542023320134555530102444311228
Q gi|254780866|r 318 IFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLH-TRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEF 396 (499)
Q Consensus 318 l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g-~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~ 396 (499)
++.+. ..++++|+++|+++|+.+|+|+|.+.++++ ++|++|+||+.|+||.++.++.++.+|++|+||++||+||+
T Consensus 318 ~gl~~---~~~a~fHl~~Ha~fKalLFL~aG~vih~~~~~qdi~~mgGL~~~mP~t~~~~~i~~lsl~G~P~~sGF~SKd 394 (618)
T MTH00210 318 CGLSN---YSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKD 394 (618)
T ss_pred HHHCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHCHHHHHH
T ss_conf 86145---889999999899999999981349887537733998818853457589999999999982560313041189
Q ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999986599--99999999999999999999999728898765--5568788912689999999999999772488
Q gi|254780866|r 397 LVIMSVFQNSNT--VAVLASFGVVLSALYSLWLYRKVVFGVSKCEK--VQQLKDLSLRERCMVYPIAVLTVFFGIYPVP 471 (499)
Q Consensus 397 ~i~~~~~~~~~~--~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~ 471 (499)
.+++.+++++.. ...+..+++.+++.|++|.+..+|+|+++.++ ..+.+|.++.+..|+.++++.++..|....+
T Consensus 395 ~ile~~~~~~~~~~~~~~~~~~~~lT~~Ys~r~~~~~f~~~~~~~~~~~~~~he~~~~m~~Pl~~La~~sv~~G~~~~~ 473 (618)
T MTH00210 395 LILELVYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVLMGVHESSWNITIPLVLLAFGSIFVGYLGKE 473 (618)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999998762799999999999999999999999987337999987666678888789999999999999999989988
No 44
>MTH00020 ND5 NADH dehydrogenase subunit 5; Reviewed
Probab=100.00 E-value=0 Score=603.93 Aligned_cols=457 Identities=21% Similarity=0.345 Sum_probs=390.4
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCC---CEEEEEEEEH
Q ss_conf 9999999999999987203553035799999999999999999999863088881899986313485---4054665225
Q gi|254780866|r 7 SIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDY---FCSYHLGVDG 83 (499)
Q Consensus 7 ~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~iD~ 83 (499)
.+++++|++++++..+.++.. ++|....++.....+.++.+...+.....++.. ...+.++|++. ..++++.+|+
T Consensus 3 lLii~~Pli~a~i~~l~gr~~-~~~~~~~i~~~~~~~s~~~s~~~~~~~~~~~~~-~~~~~~~w~~~~~~~~~~~~~~D~ 80 (608)
T MTH00020 3 LLVLFFPLVGAVLSGLFGRKI-GEKGAGILTSSCLIISLSWSFLIFYEILLNSST-TYIKLWRWLDSDLLTVYFGLQFDG 80 (608)
T ss_pred HHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-EEEEEEEEEECCCCCEEEEEEEHH
T ss_conf 999999999999999827766-840899999999999999999999999738981-699876521227715278775076
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-CC
Q ss_conf 88999999999999999752011210--0235678999863024302654043311123431034312355312343-32
Q gi|254780866|r 84 ISILLVVLTTFLTPFCILSSWKSIQE--NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS-ER 160 (499)
Q Consensus 84 ls~~f~~l~~~i~~l~~~ys~~~~~~--~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~-~~ 160 (499)
+|..+..+++.++.++.+||.+|+++ +.+||+.+++++..+|.+++.|+|++++|++||.+++++|.||++|+++ ++
T Consensus 81 ls~~~~~~v~~is~lv~iYS~~Ym~~d~~~~rf~~~l~lF~~~Ml~lv~s~nl~~lfvgWE~~gl~SylLI~~~~~~~~a 160 (608)
T MTH00020 81 LVAIMLLVVTTISTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEA 160 (608)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 59999999999999999999998467998128999999999999999997169999999999999998857231687689
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 32100011355445567766655443210001003443210133037899998541034445540002320101000222
Q gi|254780866|r 161 IYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAP 240 (499)
Q Consensus 161 ~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap 240 (499)
.+|+.|+++++++|+..++.|+..+|..+|++|++++.+..... ....+..+++++|...|+||+|||.||||+ +|+|
T Consensus 161 ~~aa~ka~l~~rvGd~~~l~~i~~l~~~~gt~~~~~i~~~~~~~-~~~~~~~~~l~~g~~~KsAq~P~h~WLP~A-m~aP 238 (608)
T MTH00020 161 NKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVAPS-SDITLICLLLFIGAVGKSAQLGLHTWLPDA-MEGP 238 (608)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HCCC
T ss_conf 99999999999865899999999999982780699999873433-258999999999999986407550204566-4589
Q ss_pred CCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 23443333-23223332111000011122331000000000122222122111000024432233210013540233310
Q gi|254780866|r 241 TAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIF 319 (499)
Q Consensus 241 ~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~ 319 (499)
||+||+++ ++++|+|+|.++|.. +++.. .+.....+.++|.+|+++|++.|+.|+|+||++||||+||+|||+++++
T Consensus 239 TPvSALlhaatmV~aGvyll~R~~-~~~~~-~~~~~~~~~~iG~~T~~~~~~~Al~Q~DiKkilAyST~SQlG~m~~~~g 316 (608)
T MTH00020 239 TPVSALIHAATMVTAGVFLLIRSS-PLFDQ-APLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACG 316 (608)
T ss_pred CCHHHHHHHHHHHHHHHHEEEEEC-CCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC
T ss_conf 970588988999974473135305-41012-7789999999999999999999997877888762033868889999850
Q ss_pred CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH-HCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHH
Q ss_conf 4875422102345554210233303567777642-001111002355654202332013455553010244431122899
Q gi|254780866|r 320 SGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDR-LHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLV 398 (499)
Q Consensus 320 ~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~-~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i 398 (499)
.+. ..++++|+++|+++|+.+|+|+|.+.+. +|++|++++||+.|+||.++.++.++.+|++|+||++||+||+.+
T Consensus 317 l~~---~~~a~fHl~~Ha~fKalLFl~aG~vih~~~~~qdi~~mggl~~~mP~t~~~~~i~~lal~G~P~~~GF~SKd~i 393 (608)
T MTH00020 317 LSH---YSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDIRKMGGLISFLPLTYIMFVIGSLSLMGFPYLTGFYSKDLI 393 (608)
T ss_pred CCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 140---87889999999999999998435999834685038884794134839999999999998454124089879999
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999986599--99999999999999999999999728898765--55687889126899999999999997724889
Q gi|254780866|r 399 IMSVFQNSNT--VAVLASFGVVLSALYSLWLYRKVVFGVSKCEK--VQQLKDLSLRERCMVYPIAVLTVFFGIYPVPI 472 (499)
Q Consensus 399 ~~~~~~~~~~--~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~ 472 (499)
++.+++++.. ...+..+++.+++.|..|.+..+|+|+++.++ ..+.+|.++.+..|+.++++.++..|....+.
T Consensus 394 le~~~~~~~~~~~~~~~~~~~~lT~~y~~R~~~~~f~g~~~~~~~~~~~~hE~~~~M~~Pl~iLa~~si~~G~l~~~~ 471 (608)
T MTH00020 394 LELAFGQYYLIFAYWLGCFSALLTALYSIRLIYLTFLSNTNLKRAVFFFLHEGSWNLLLPLGILALGSIFVGYLAKEM 471 (608)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999986626999999999999999999999999999479999976555667687899999999999999999999988
No 45
>PRK02504 NAD(P)H-quinone oxidoreductase subunit 2; Provisional
Probab=100.00 E-value=0 Score=609.40 Aligned_cols=461 Identities=19% Similarity=0.303 Sum_probs=382.0
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEEHHH
Q ss_conf 89999999999999987203553035799999999999999999999863088881899986313485405466522588
Q gi|254780866|r 6 LSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLGVDGIS 85 (499)
Q Consensus 6 l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iD~ls 85 (499)
.++++.+|.++.++..+...+++ ++.... .+..++..+........+...... ..-.+..|+++
T Consensus 18 Peiil~~~~l~~Ll~~l~~~~~~-~~~~~~----is~~~l~~~~~~l~~~~~~~~~~~-----------f~g~~~~D~~s 81 (514)
T PRK02504 18 PEGIVLLTLLGVLLVDLIGGRTA-SRWLPY----IAIAGLGAALVLLALQWDNPNPIS-----------FLGAFNADNLS 81 (514)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCC-CHHHHH----HHHHHHHHHHHHHHHHHCCCCCCC-----------CCCCEEECHHH
T ss_conf 99999999999999999557430-079999----999999999999999955887521-----------02624436577
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCH---HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECC-CCCCC
Q ss_conf 9999999999999997520112100---2356789998630243026540433111234310343123553123-43323
Q gi|254780866|r 86 ILLVVLTTFLTPFCILSSWKSIQEN---FREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWG-GSERI 161 (499)
Q Consensus 86 ~~f~~l~~~i~~l~~~ys~~~~~~~---~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~-~~~~~ 161 (499)
..+..++.+.+.++.+++.+|.+++ .+||+.++++...|++.+..|+|++++|++||++++++|.|+++++ ++++.
T Consensus 82 ~~~~~ii~~~~~l~~l~S~~y~~~~~~~~~ef~~llL~~~lG~~~l~~s~dLi~lfv~~El~sl~sY~Li~~~~~~~~s~ 161 (514)
T PRK02504 82 IAFRAIIALSTLVTLLMSWRYVEQSGTPLGEFAAILLTATLGGMFLCGATDLVMIFISLETLSIASYLLSGYMKRDPRSS 161 (514)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99999999999999999999986178650599999999999999999971799999999999999999988754997899
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHC-CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2100011355445567766655443210-0010034432101-3303789999854103444554000232010100022
Q gi|254780866|r 162 YAAYKFFLYTFFGSIFMLFAIVVMCWEK-KTSSIIDLYAMSK-FPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQA 239 (499)
Q Consensus 162 ~aa~ky~i~~~~~s~~lL~g~~~l~~~~-gs~~~~~~~~~~~-~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~a 239 (499)
||++||++++.+++.++++|+.++|+.+ |+.+++++..... .+.....+..++++.|+++|++++|||.|+||+|++|
T Consensus 162 eAalKYfllg~~~s~~lL~Gi~llYg~t~g~~~l~~i~~~~~~~~~~~~~~~l~lil~G~~fK~a~~PfH~WlPDay~gA 241 (514)
T PRK02504 162 EAALKYLLIGAASAAIFLYGSSLLYGLSGGSTQLDAIALALITSPSLLLALALVFVLAGIAFKIAAVPFHQWTPDVYEGS 241 (514)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
T ss_conf 99999999988889999999999999970768899999987558628999999999999999974166543654576488
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 22344333323223332111000011122331000000000122222122111000024432233210013540233310
Q gi|254780866|r 240 PTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIF 319 (499)
Q Consensus 240 p~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~ 319 (499)
|+|+++++|++.++.|.+.++|+....++...++|...+.++|++|+++|++.|++|+|+||++|||||+|+||++++++
T Consensus 242 Ptpvsa~ls~~~k~a~~~llir~~~~~~~~~~~~~~~il~ilailSmi~G~l~Al~Q~diKRlLAYSSIsh~Gyillgl~ 321 (514)
T PRK02504 242 PTPVVAFLSVGSKAAGFALAIRLLVTAFPAFDEQWKLLFTVLAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLV 321 (514)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 67899999999999999999999998364247889999999999999988899999987749999989989999999999
Q ss_pred CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHH
Q ss_conf 48754221023455542102333035677776420011110023556542023320134555530102444311228999
Q gi|254780866|r 320 SGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVI 399 (499)
Q Consensus 320 ~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~ 399 (499)
.+++.|+.++++|+++|+++|.++|.+++.+.+++|++|++|++|+.|++|+++.++.++.+|++|+||++||+|||+++
T Consensus 322 ~gt~~g~~a~i~yl~~y~~~~~~~F~~i~~~~~~~gt~~i~~l~GL~~~~P~~a~~~~i~~lSLaGiPP~~GF~~K~~if 401 (514)
T PRK02504 322 AGTEAGYASMVLYLLAYLFMNLGAFACVILFSLRTGTDRISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLF 401 (514)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 66588999999999999999999999999999745844499861968774999999999999999787987999999999
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCCCCCCH------HHHHHHHHHHHHHHHHHHH
Q ss_conf 999986599-99999999999999999999999728898765--55687889126------8999999999999977248
Q gi|254780866|r 400 MSVFQNSNT-VAVLASFGVVLSALYSLWLYRKVVFGVSKCEK--VQQLKDLSLRE------RCMVYPIAVLTVFFGIYPV 470 (499)
Q Consensus 400 ~~~~~~~~~-~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~--~~~~~~~~~~~------~~~~~~l~~~~i~lGi~p~ 470 (499)
.++++++.+ +.++.++++++++.||+|+++.+|+++|+++. .++.++.+|++ ...+.++.+.++..|++|+
T Consensus 402 ~a~~~~g~~~la~~~~l~Svis~~YYlRii~~m~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~ 481 (514)
T PRK02504 402 WAGWQAGQYLLVLVGLVTSVISIYYYIRVIKMMVVKEPQEMSDVVKNYPEINWNLPGMPPLRVGLVLCVIATALAGILSN 481 (514)
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999493999999999999999999999999937998444532236898864345776089999999999998352761
Q ss_pred HHHHHHHHHHHH
Q ss_conf 899999999999
Q gi|254780866|r 471 PIRDTFSVPLSS 482 (499)
Q Consensus 471 ~~~~~~~~~~~~ 482 (499)
|+++..+++++.
T Consensus 482 p~~~~~~~av~~ 493 (514)
T PRK02504 482 PLFTLANTAVAG 493 (514)
T ss_pred HHHHHHHHHHHC
T ss_conf 699998877406
No 46
>PRK08042 formate hydrogenlyase subunit 3; Reviewed
Probab=100.00 E-value=0 Score=606.28 Aligned_cols=405 Identities=20% Similarity=0.344 Sum_probs=363.6
Q ss_pred ECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHH-HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCC
Q ss_conf 1348540546652258899999999999999975201121002-356789998630243026540433111234310343
Q gi|254780866|r 69 HWIDYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQENF-REYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIP 147 (499)
Q Consensus 69 ~~~~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~-~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~ 147 (499)
.|.-+...+++++|++|.+|..+++.++..+.+|+.+|++|++ ++++.++.++..+|.+++.++|+++++++||+++++
T Consensus 46 ~~~lp~~~~~~rlD~LSa~fllvi~~vg~~v~lYS~gY~~~~~~~~~~~~~~Lf~asM~~vvlA~nl~~f~vfwElmsL~ 125 (593)
T PRK08042 46 SGALSLVSYDVQITPLNAIWLITLGLCGLFVSLFNIDWHRHAQVKANGLLINLLMAAAVCAVVASNLGMFVVMAEIMALC 125 (593)
T ss_pred CCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 66788886356766778999999999999999991712116665514799999999999999997799999999999999
Q ss_pred CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 12355312343323210001135544556776665544321000100344321013303789999854103444554000
Q gi|254780866|r 148 MFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFP 227 (499)
Q Consensus 148 ~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~P 227 (499)
+|+|+.. .+++.||++++++|+..++.|+.++|..+||+|+.++....... ......+++.++||+.|+|++|
T Consensus 126 SyfLV~~------~~ag~~yf~~~~iG~~~ll~g~~ll~~~~Gsl~f~~~~~~~~~~-~~~~~v~ll~liGFg~Kagl~P 198 (593)
T PRK08042 126 AVFLTGN------SKEGKLWFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRAQQL-PLGSDIWLLGVIGFGLLAGIIP 198 (593)
T ss_pred HHHHHHC------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999864------23329999999999999999999999996780199887430245-4278999999999999861442
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCC
Q ss_conf 23201010002222344333323223332111000011122331000000000122222122111000024432233210
Q gi|254780866|r 228 FHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSS 307 (499)
Q Consensus 228 fH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySs 307 (499)
+|.|+||+|+++|+++|+++|++++|+|+|+++|+.. ..+..+.+|...+.++|.+|+++|++.|+.|+|+||++||||
T Consensus 199 LH~WLPdAh~~APs~vSaL~SgvmvKvGvYgliR~~~-~~~~~~~~~g~lll~lG~iTal~G~l~Al~Q~DlKRlLAYSS 277 (593)
T PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSL-LGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHT 277 (593)
T ss_pred CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6121010016786899999999999999999999998-615516799999999999999999999998888999999988
Q ss_pred CCCCCHHHHHHCCCC-----------CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCH
Q ss_conf 013540233310487-----------542210234555421023330356777764200111100235565420233201
Q gi|254780866|r 308 IAHMGYVTIGIFSGM-----------KSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVM 376 (499)
Q Consensus 308 i~~~G~i~~~l~~~~-----------~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~ 376 (499)
|+|+|||+++++.+. ..++.++++|++||+++|+++|+++|.+++++||+|++|+||+.|+||+++.++
T Consensus 278 IsqiGyIllglG~~~~~~a~~~~~l~~lgl~gal~HllnHalfKalLFL~AG~V~~~tgt~di~~lGGL~k~MP~ta~~f 357 (593)
T PRK08042 278 LENIGIILLGLGAGVTGIALEQPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAM 357 (593)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHH
T ss_conf 99999999999985542211421457889999999999999999999999999999968553889489755557999999
Q ss_pred HHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 3455553010244431122899999998659-----------99999999999999999999999972889876555687
Q gi|254780866|r 377 MVFTMANMGLPGTSGFIGEFLVIMSVFQNSN-----------TVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLK 445 (499)
Q Consensus 377 ~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~-----------~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~ 445 (499)
.++.+|++|+||++||+|||+++++.++... ...+...+...+++.++.|.+...|.|++|+++.++.+
T Consensus 358 lIgalAiaGlPPlnGFvSewli~qs~f~~~~~~~~~~~~~~~l~~~~lal~~aLa~~~fvK~~gv~FlG~pRs~~a~~a~ 437 (593)
T PRK08042 358 LVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAENAT 437 (593)
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
T ss_conf 99999980588735599999999999846777418999999999999999999999999999887422799982331566
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 889126899999999999997724889999999999
Q gi|254780866|r 446 DLSLRERCMVYPIAVLTVFFGIYPVPIRDTFSVPLS 481 (499)
Q Consensus 446 ~~~~~~~~~~~~l~~~~i~lGi~p~~~~~~~~~~~~ 481 (499)
|.++.|..++.+++..|+.+|+.|.++.+.......
T Consensus 438 e~p~~m~~~m~~LA~~c~~~g~~~~~~~p~~~~~~~ 473 (593)
T PRK08042 438 CAPLLMSVSVVALAICCVIGGVAAPWLLPMLSAAVP 473 (593)
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
T ss_conf 797767899999999999970457888999831500
No 47
>MTH00032 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=589.39 Aligned_cols=457 Identities=20% Similarity=0.332 Sum_probs=381.0
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC---CCEEEEEEEEH
Q ss_conf 999999999999998720355303579999999999999999999986308888189998631348---54054665225
Q gi|254780866|r 7 SIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWID---YFCSYHLGVDG 83 (499)
Q Consensus 7 ~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~iD~ 83 (499)
.+++++|++++++..+.++...+ +....++......+.+.+...+.....++... ..+.+.|++ ...++++.+|+
T Consensus 3 llii~lPl~~~~i~~~~gr~~~~-~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~-~~~~~~w~~~~~~~~~~~~~~D~ 80 (677)
T MTH00032 3 LLVLLLPFINAFLLGFFGRLIGT-IGSGILSTICMGSSTLIALFLAYEVLINDAVV-HIELYKWIESEIFITHIGLLYDT 80 (677)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE-EEEEEECCCCCCCCEEEEEEEHH
T ss_conf 99999999999999985052560-35799999999999999999999995589738-99985433456765257877521
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCH--HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-CC
Q ss_conf 889999999999999997520112100--235678999863024302654043311123431034312355312343-32
Q gi|254780866|r 84 ISILLVVLTTFLTPFCILSSWKSIQEN--FREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS-ER 160 (499)
Q Consensus 84 ls~~f~~l~~~i~~l~~~ys~~~~~~~--~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~-~~ 160 (499)
+|..+..+++.++.++.+||.+|++++ .+||+.+++++..+|.+++.|+|++++|++||.+++++|.||++|+++ ++
T Consensus 81 ls~~m~~~v~~is~lv~iYS~~Ym~~d~~~~rf~~~l~lF~~~Ml~lV~s~nl~~lfigWE~vgl~SylLI~~~~~r~~a 160 (677)
T MTH00032 81 LSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQA 160 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 17999999999999999996887379998517999999999999999995619999999999999989760626884789
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC----------------CCHHHHHHHHHHHHCCCCCCCC
Q ss_conf 321000113554455677666554432100010034432101----------------3303789999854103444554
Q gi|254780866|r 161 IYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSK----------------FPFSIQYWMWIAFFCSFAIKIP 224 (499)
Q Consensus 161 ~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~----------------~~~~~~~~~~~ll~~g~~~K~~ 224 (499)
.+|+.|++++|++|+..++.|+..+|...||+|++++..... .+........+++++|...|+|
T Consensus 161 ~~aa~ka~i~nrvGd~~~l~gi~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ga~~KSA 240 (677)
T MTH00032 161 NKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGGSVGSGIMDRGYGEGGAYESPLAPFAIIGILLLIGCIGKSA 240 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999985076999999999999996774299876554225665433554332014226899999999999988741
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCC
Q ss_conf 000232010100022223443333-2322333211100001112233100000000012222212211100002443223
Q gi|254780866|r 225 MFPFHTWLPNAHVQAPTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLI 303 (499)
Q Consensus 225 ~~PfH~WlP~~y~~ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~Krll 303 (499)
|+|+|.||||+ +|+|||+||++| ++++|+|+|.++|.. |++.. .+.....+.++|.+|+++|+..|+.|+|+||++
T Consensus 241 q~plh~WLPdA-MegPTPVSALiHaatmV~AGvyll~R~~-pl~~~-~~~~~~~i~~~G~~T~~~~a~~al~Q~DiKril 317 (677)
T MTH00032 241 QLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLMIRSF-PLFEK-APLTLLIITIFGALTAFFAATVGLVQNDLKKVI 317 (677)
T ss_pred HCCCCHHCHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHHC-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 06162206787-5589960478879999998999999974-03443-199999999999999999999998773155888
Q ss_pred CCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC--CCCCCHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 3210013540233310487542210234555421023330356777764200--11110023556542023320134555
Q gi|254780866|r 304 AYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLH--TRDIFAYGGLVHNMPRYAVVMMVFTM 381 (499)
Q Consensus 304 AySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g--~~~l~~l~Gl~~~~P~~~~~~~i~~l 381 (499)
||||++|+|||++++|... ++..+++|+++|+++|+.+|+|+|.+.+.++ ++|++++||+.|+||++..++.++.+
T Consensus 318 AyST~SQlGym~~~~Gl~g--~~~~a~fHl~~Ha~fKalLFl~aG~vih~~~~~~qd~r~mGgl~~~mP~t~~~~~i~~l 395 (677)
T MTH00032 318 AYSTCSQLGYMVLIIGIEG--SHNVGLFHLVNHAFFKALLFLSAGSVIHSTTVDEQDMRKMGGLIHSIPFTYTMMLIGSF 395 (677)
T ss_pred HHHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 8736888999999972220--79999999998999999999702288870474356899858973456499999999999
Q ss_pred HHCCCHHHHHHCCHHHHHHHHHHH--------------------------------------HHHHHHHHHHHHHHHHHH
Q ss_conf 530102444311228999999986--------------------------------------599999999999999999
Q gi|254780866|r 382 ANMGLPGTSGFIGEFLVIMSVFQN--------------------------------------SNTVAVLASFGVVLSALY 423 (499)
Q Consensus 382 sl~G~Pp~~GF~~k~~i~~~~~~~--------------------------------------~~~~~~~~~~~~~ls~~~ 423 (499)
|++|+||++||+||+.|+|.++.. +.+..++..+++.+++.|
T Consensus 396 al~G~P~~~GF~SKd~ile~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~aa~LTa~Y 475 (677)
T MTH00032 396 SIMGLPYLTGFYSKDLILELTYSGRNMGIPFGSSLLSIEGDIEIKKGGIRPWGGAGLSPSRGSAFAFWLGTVAALLTAFY 475 (677)
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 98068620114207999999986013454311100111100000122211000000133402499999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCC----CCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999997288987655----56878891268999999999999977248
Q gi|254780866|r 424 SLWLYRKVVFGVSKCEKV----QQLKDLSLRERCMVYPIAVLTVFFGIYPV 470 (499)
Q Consensus 424 ~l~~~~~~~~g~~~~~~~----~~~~~~~~~~~~~~~~l~~~~i~lGi~p~ 470 (499)
+.|....+|+++++.++. ++..+.++.+..|+.++++..++.|..-+
T Consensus 476 S~RLifltF~g~pn~~~~~~~~~~~~~~~~~ml~pL~iLa~gsIf~G~l~~ 526 (677)
T MTH00032 476 SIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYLIQ 526 (677)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999998168999976657676676778899999999999999999998
No 48
>PRK12668 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=598.65 Aligned_cols=435 Identities=20% Similarity=0.344 Sum_probs=357.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEEHHHHHH
Q ss_conf 99999999999987203553035799999999999999999999863088881899986313485405466522588999
Q gi|254780866|r 9 VTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLGVDGISILL 88 (499)
Q Consensus 9 ii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iD~ls~~f 88 (499)
+.++|+++++++++.+. + .| +...+....+.+.... ....+ ...+. ++.+.. -..+++|++|.+|
T Consensus 8 P~l~~iigAlllpfl~~--~-~r--~~~~l~~p~l~~~~~l----~~~~g-~~~~~----~~lg~~-l~~~rvD~LS~~F 72 (569)
T PRK12668 8 PALLFIAGALLLPFLPG--R-LR--HALLLLIPVLAVLAVW----TVPPG-THLTV----TFLGFT-LVLVRVDKLSRVF 72 (569)
T ss_pred HHHHHHHHHHHHHHCCC--H-HH--HHHHHHHHHHHHHHHH----HCCCC-CCCEE----EECCEE-EEEEEECHHHHHH
T ss_conf 89999999999998111--5-99--9999999999999999----57577-66404----553447-8888765768999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHH
Q ss_conf 99999999999975201121002356789998630243026540433111234310343123553123433232100011
Q gi|254780866|r 89 VVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFF 168 (499)
Q Consensus 89 ~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~ 168 (499)
..++++++.+..+|++.+.+ +.|. ...++..++++|++.|+|++++|++||++++++|.||.+++++++.+|++||+
T Consensus 73 ali~~ii~~l~~lYs~~~~~--~~~~-~~~lly~g~~lGvv~a~Dl~~lfvfwEl~sl~S~~LI~~~~~~~a~~Aa~kYl 149 (569)
T PRK12668 73 GLIFGIMAFIGVLYALHVKD--RGQH-VAALLYVGSALGAVFAGDLLTLFVFWELMAIASTFLVWARGTPEAYRAGFRYL 149 (569)
T ss_pred HHHHHHHHHHHHHHHHHCCC--HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 99999999999999853176--6789-99999999999999982499999999999999999862279867789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 35544556776665544321000100344321013303789999854103444554000232010100022223443333
Q gi|254780866|r 169 LYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLA 248 (499)
Q Consensus 169 i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls 248 (499)
+++.+|+.+++.|+.++|.++||+|++++.... .....++++|+++|+|++|||.|+||+|+++|+++|+++|
T Consensus 150 i~~~~G~~~lL~Gi~lly~~tGsl~~~~~~~~~-------~~~~~LiliGf~~Kaa~~P~H~WLPdAy~~at~~~s~llS 222 (569)
T PRK12668 150 LVHVLGGVLLLAGILLYYAETGSLAFGSIGGGG-------SLAAWLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLS 222 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH-------HHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHH
T ss_conf 999878999999999999980982099876014-------7999999999999846575465530014688659999999
Q ss_pred CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC
Q ss_conf 23223332111000011122331000000000122222122111000024432233210013540233310487542210
Q gi|254780866|r 249 GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEG 328 (499)
Q Consensus 249 ~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~ 328 (499)
+.++|+|+|+++|.. +. ...++++|.+|+++|++.|+.|+|+||++|||||+|+|||+++++.+++.++.|
T Consensus 223 a~~vK~gvY~l~R~~----~g-----~~~l~~lG~it~~~g~~~Al~Q~DlKRlLAYStvsQlGym~~giGigt~la~~g 293 (569)
T PRK12668 223 AFTTKTAVYALARAF----PG-----TELLIYIGAAMALYGVIYALLENDLRRLLSYHIVSQVGYMVAGVGIGTALAING 293 (569)
T ss_pred HHHHHHHHHHHHHHH----HH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 999999999999997----42-----799999999999999999998722899999989989999999997351989999
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 23455542102333035677776420011110023556542023320134555530102444311228999999986599
Q gi|254780866|r 329 AMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSNT 408 (499)
Q Consensus 329 ~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~~ 408 (499)
+++|++||+++|++||+++|.+++++|++|++|+||++|+||+++.++.++.+|++|+|||+||+|||++++++.+.+.+
T Consensus 294 a~~H~~nHa~~KalLFm~aGaV~~~tgt~~i~~lgGL~k~MP~t~~~~~igalsi~GvPpfsGF~SK~mI~~aa~~~~~~ 373 (569)
T PRK12668 294 AVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLYKSMPLTTVFCIVGALSISAFPLFSGFVSKSMIISAAGEGHLD 373 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCH
T ss_conf 99999999999999999876998981870389949933221899999999999987262304999999999998867967
Q ss_pred HHH-HHHHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999-9999999999999-99999997288987655568788912689999999999999772488999999999
Q gi|254780866|r 409 VAV-LASFGVVLSALYS-LWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRDTFSVPL 480 (499)
Q Consensus 409 ~~~-~~~~~~~ls~~~~-l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~~~~~~~ 480 (499)
+.. ...+++.-+..++ +|....+|+|+.+++ +.+|.|+.|..++.+++++|+..|++|+++.+.+.-++
T Consensus 374 ~~~~~l~~as~g~f~~~~~k~~~~~F~~~~~~~---~~~e~p~~m~~~m~ila~lci~~G~~p~~l~~~lp~~~ 444 (569)
T PRK12668 374 WVWLMLLFASAGTFLHAGIKFPYFAFFGHDSGL---RAKDAPRNMLAAMGIAAALCIAIGVYPQALYALLPYPV 444 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC---CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
T ss_conf 999999999999999999988883140689998---88999988998899999999730057687897589876
No 49
>MTH00014 ND4 NADH dehydrogenase subunit 4; Validated
Probab=100.00 E-value=0 Score=595.33 Aligned_cols=446 Identities=30% Similarity=0.542 Sum_probs=385.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEEHHHHH
Q ss_conf 99999999999998720355303579999999999999999999986308888189998631348540546652258899
Q gi|254780866|r 8 IVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLGVDGISIL 87 (499)
Q Consensus 8 lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iD~ls~~ 87 (499)
+-+++|+++.+...+.. |..+.+......+....... .. ...... ...+.++++|++|..
T Consensus 2 l~il~p~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~----------~~~~~~~~vD~lS~~ 61 (451)
T MTH00014 2 LKLIMPLISLLLLPLFK------KLYAWISILTLILSLLILIF--LY--MPSASI----------SMLTESLSSDMLSFP 61 (451)
T ss_pred HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHH--HH--CCCCCH----------HHHHHHHHHHHHHHH
T ss_conf 13899999999999998------69999999999999999999--85--654327----------787588834674799
Q ss_pred HHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECC-CCCCCCCC
Q ss_conf 999999999999975201121--002356789998630243026540433111234310343123553123-43323210
Q gi|254780866|r 88 LVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWG-GSERIYAA 164 (499)
Q Consensus 88 f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~-~~~~~~aa 164 (499)
+..++..++.++.+||+++.+ +++++|+.+++++..++.+.+.|+|++++|++||++++|+|.++..|+ ++||.+|+
T Consensus 62 l~~Ls~~i~~l~~l~S~~~~~~~~~~~~f~~l~l~l~~~m~~~f~s~nl~~fyif~E~~lip~~~LI~~~g~~~~r~~A~ 141 (451)
T MTH00014 62 LIILTLWITALMILASFKIFQNNKAPKTFMTNILILNLILILCFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQAG 141 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 99999999999999969998568637899999999999999999982799999999999999999999608979999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00113554455677666554432100010034432101330378999985410344455400023201010002222344
Q gi|254780866|r 165 YKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGS 244 (499)
Q Consensus 165 ~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~s 244 (499)
.||++++..|+..+++|+..+|..+|+.|+.......+.+.......+.+++.||++|+|++|||.|+||+|+|||+++|
T Consensus 142 ~~~~iyt~~gsl~lL~~i~~ly~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~aF~vK~p~~P~H~WLP~Ah~eAP~~~S 221 (451)
T MTH00014 142 FYLMIYTVTASLPLLMSILLIFYTNNSLNMFMSNTYTPPSIYSMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGS 221 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHH
T ss_conf 99999999999999999999998649699999998663445899999999999999970687201013431075977999
Q ss_pred CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 33332322333211100001112233100000000012222212211100002443223321001354023331048754
Q gi|254780866|r 245 VFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKS 324 (499)
Q Consensus 245 alls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~ 324 (499)
+++||++.|+|.|+++|+. +.+++....+...+..++++|+++|++.|++|+|+||++|||||+|+|++++|++.+++.
T Consensus 222 ~lLagvllK~G~YgliR~~-~~~~~~~~~~~~~l~~i~~~~~~~~~l~al~Q~DlKrllAYSSIshmG~i~~gi~~~~~~ 300 (451)
T MTH00014 222 MILAGILLKLGGYGLLRMS-SLFMSINKSLSAPLSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGAMSNTSW 300 (451)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999-853133699999999999999999999999983668354211798999999999974589
Q ss_pred CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHH
Q ss_conf 22102345554210233303567777642001111002355654202332013455553010244431122899999998
Q gi|254780866|r 325 GVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQ 404 (499)
Q Consensus 325 ~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~ 404 (499)
|..|+++|+++|++.|+++|+++|.+++|+||||++++||+.|++|.++..+.+++++++|+||++||+||++++.+.++
T Consensus 301 g~~gal~~mi~Hgl~~s~LF~~~g~i~~~~~tr~i~~~~Gl~~~~P~~~~~~~i~~la~~g~Pp~~gF~sE~~i~~~~~~ 380 (451)
T MTH00014 301 GWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPAMTMWWFLLSAANMAAPPSINLLSEIMLLTSILS 380 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999987577149985893400279999999999997626533619999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 65999999999999999999999999972889876555687889126899999999999997724889999
Q gi|254780866|r 405 NSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRDT 475 (499)
Q Consensus 405 ~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~~ 475 (499)
.+++..+.+.+++.+++.|++|.+.++++|+.++ ..++.+|.+.||...+.......+.+|++|+.+.+.
T Consensus 381 ~~~~~~~~~~~~~~lsa~Y~l~l~~~~~~G~~~~-~~~~~~~~~~re~~~~~~h~~pl~~l~~~p~~~~~w 450 (451)
T MTH00014 381 SSTSTAILLALTSFLAAAYSLFLYTSTQHGSPPS-FSNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 450 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 8699999999999999999999999987799801-040089984579999999999999999819999714
No 50
>MTH00044 ND4 NADH dehydrogenase subunit 4; Validated
Probab=100.00 E-value=0 Score=591.20 Aligned_cols=399 Identities=34% Similarity=0.598 Sum_probs=366.6
Q ss_pred CEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC----HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCE
Q ss_conf 405466522588999999999999999752011210----0235678999863024302654043311123431034312
Q gi|254780866|r 74 FCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQE----NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMF 149 (499)
Q Consensus 74 ~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~----~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~ 149 (499)
..++.+++|++|.+++.++..++.++.++|+++.++ |+++|+.+++++..++.+.+.|+|++.+|++||.+++|+|
T Consensus 52 ~~~~~~~~D~lS~~lilLt~~l~~l~~laS~~~l~~~~~~~~~~f~~lll~l~~~l~~~F~s~dl~~fyiffE~~lIp~~ 131 (460)
T MTH00044 52 NLSLSLATDSISTPLIILSCWLIPISLLASINHLSNYSLLNQRTFISLIIIILTALIITFSSLELSLFYIAFETTLIPTL 131 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 56599957676899999999999999999799986286421889999999999999999998389999999999999999
Q ss_pred EEEEECCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH---HHCCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 35531234-332321000113554455677666554432100010034432---10133037899998541034445540
Q gi|254780866|r 150 VIIGVWGG-SERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYA---MSKFPFSIQYWMWIAFFCSFAIKIPM 225 (499)
Q Consensus 150 ~Li~~~~~-~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~---~~~~~~~~~~~~~~ll~~g~~~K~~~ 225 (499)
.+|..||+ +||.+|+.||++++.+||..+++|+..+|..+|+.++..... ....+.......+..+++||++|+|+
T Consensus 132 ~LI~~wG~~~~r~~A~~~~~~yt~~gSl~lL~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~l~~~laF~vK~pl 211 (460)
T MTH00044 132 ILISRWGAQKERYQASLYFLFYTLFGSLPLLISLIAIYVSSSSLSIPSVNLNWNFTSSPTSLTSIWWLFCFLAFLVKMPI 211 (460)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99988399879999999999999998999999999999984875199999998875341669999999999999997368
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCC
Q ss_conf 00232010100022223443333232233321110000111223310000000001222221221110000244322332
Q gi|254780866|r 226 FPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAY 305 (499)
Q Consensus 226 ~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAy 305 (499)
+|||.|+||+|+|||+++|++++|++.|+|.|+++|+.....+.....+...+..+++.++++|++.|++|+|+||++||
T Consensus 212 ~P~H~WLP~Ah~eAP~~~SmlLAgvllKlG~YgliR~~~~~~~~~~~~~~~~l~~l~~~g~~~~s~~al~Q~DlKrliAY 291 (460)
T MTH00044 212 YGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLISLFSTPSLNNLSFPLITFCIWGALITSIICLRQTDLKALIAY 291 (460)
T ss_pred HHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 76012372643539806999999999999999999999986305689999999999999999999999986475299999
Q ss_pred CCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCC
Q ss_conf 10013540233310487542210234555421023330356777764200111100235565420233201345555301
Q gi|254780866|r 306 SSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMG 385 (499)
Q Consensus 306 Ssi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G 385 (499)
|||+|||++++|++.+++.|..|+++|+++|++.|+++|+++|.+++|+||||++++||+.+++|.++..+.++.+++.|
T Consensus 292 SSVsHmG~v~~gi~~~~~~g~~Gal~~miaHgl~ss~LF~lag~~y~rt~tr~i~~~~Gl~~~~P~~~~~~~i~~la~~g 371 (460)
T MTH00044 292 SSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANTLYERSGTRTLAITRGLKLITPLLTLWWLITCAANLG 371 (460)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 33998999999999705889999999999999999999999889997038673787388165637999999999999751
Q ss_pred CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 02444311228999999986599999999999999999999999997288987655568788912689999999999999
Q gi|254780866|r 386 LPGTSGFIGEFLVIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFF 465 (499)
Q Consensus 386 ~Pp~~GF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~l 465 (499)
+||+.||+||++++.+.++..++..+++.++..+++.|++|.++++++|+.++ ..++.+|.+.||...+....+..+.+
T Consensus 372 lPp~~gF~gE~~i~~s~~~~~~~~~~~~~~~~~lta~Y~L~~~~~~~~G~~~~-~~~~~~~~~~rE~~~l~~h~~p~~~l 450 (460)
T MTH00044 372 LPPLPNLIGELLIISSIIDWNILSFPIIGLATVFGAIYSLLIYQLTNSGTFPS-FISNISPITSREHLLIFLHLLPLILI 450 (460)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 64346099999999999999899999999999999999999999986799810-14338998578999999999999999
Q ss_pred HHHHHHHH
Q ss_conf 77248899
Q gi|254780866|r 466 GIYPVPIR 473 (499)
Q Consensus 466 Gi~p~~~~ 473 (499)
|++|+++.
T Consensus 451 ~~~P~~i~ 458 (460)
T MTH00044 451 IINPSLIL 458 (460)
T ss_pred HHCHHHHH
T ss_conf 97868886
No 51
>CHL00049 ndhB NADH dehydrogenase subunit 2
Probab=100.00 E-value=0 Score=585.59 Aligned_cols=454 Identities=18% Similarity=0.248 Sum_probs=371.1
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHH
Q ss_conf 99999998720355303579999999999999999999986308888189998631348540546652258899999999
Q gi|254780866|r 14 FLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLGVDGISILLVVLTT 93 (499)
Q Consensus 14 ll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iD~ls~~f~~l~~ 93 (499)
..+++++++.+...++++..+ ....+...++.+........+..+... + .-.+.+|+++..+..+..
T Consensus 25 ~~~~~~~ll~~~~~~~~~~~~--~~~ls~~~l~~~~~~l~~~~~~~~~~~---------f--~g~~~~D~~s~~~~~ii~ 91 (498)
T CHL00049 25 IFGLILLLMIDLTSDQKDIPW--LYFISSTSLVMSITALLFQWREEPMIS---------F--SGNFQTNNFNEIFRFLIL 91 (498)
T ss_pred HHHHHHHHHHHHHCCCCCHHH--HHHHHHHHHHHHHHHHHHHCCCCCCCC---------C--CCCEEECHHHHHHHHHHH
T ss_conf 999999999999636541169--999999999999999999658986543---------4--661687658899999999
Q ss_pred HHHHHHHHHHCCCCCC---HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECC-CCCCCCCCCHHHH
Q ss_conf 9999999752011210---02356789998630243026540433111234310343123553123-4332321000113
Q gi|254780866|r 94 FLTPFCILSSWKSIQE---NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWG-GSERIYAAYKFFL 169 (499)
Q Consensus 94 ~i~~l~~~ys~~~~~~---~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~-~~~~~~aa~ky~i 169 (499)
..+.++.+++.+|.++ +..||+.++++...|++.+..|+|++++|++||++++++|.|+++++ ++++.||+.||++
T Consensus 92 ~~~~l~~l~s~~y~~~~~~~~~Ef~~l~l~a~lG~~~l~~a~dl~~lfl~lEl~sl~sY~Lv~~~~~~~~s~eAalKYfl 171 (498)
T CHL00049 92 LCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDVRSNEATMKYLL 171 (498)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 99999999999999756776648999999999989999986279999999999999999998943378678999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHC----CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 55445567766655443210-0010034432101----330378999985410344455400023201010002222344
Q gi|254780866|r 170 YTFFGSIFMLFAIVVMCWEK-KTSSIIDLYAMSK----FPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGS 244 (499)
Q Consensus 170 ~~~~~s~~lL~g~~~l~~~~-gs~~~~~~~~~~~----~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~s 244 (499)
++.+++.++++|+.++|+.+ |+.+++++..... .+.....+...++++|+++|.+++|||+|+||+|++||+|++
T Consensus 172 lg~~ss~~lL~GisllYg~tggs~~l~~i~~~~~~~~~~~~~~~~~~l~lil~G~~fK~a~~PFH~WlPDvY~gAPtpvs 251 (498)
T CHL00049 172 MGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGSPTPVV 251 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH
T ss_conf 99888999999999999993680009999999875344440799999999999999986225323223557447978999
Q ss_pred CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCC-CC
Q ss_conf 33332322333211100001112233100000000012222212211100002443223321001354023331048-75
Q gi|254780866|r 245 VFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSG-MK 323 (499)
Q Consensus 245 alls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~-~~ 323 (499)
+++|++.+|++.+.++|+....++.....|...+.++|++|+++|++.|++|+|+||++|||||+|+||+++++..+ ++
T Consensus 252 a~ls~~~K~a~~~~l~Rl~~~~~~~~~~~~~~~l~ila~lSmi~G~l~Al~Q~~iKRlLAYSSIsh~Gyillgl~~g~~~ 331 (498)
T CHL00049 252 AFLSVTSKVAASALATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSN 331 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 99999999999999999999873403789999999999999999999999886430777678687768999999966458
Q ss_pred CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHH
Q ss_conf 42210234555421023330356777764200111100235565420233201345555301024443112289999999
Q gi|254780866|r 324 SGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVF 403 (499)
Q Consensus 324 ~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~ 403 (499)
.+..+.++|+++|+++|.++|.+++.+.+++|++|++|++|+.|++|+++.++.++.+|++|+||++||+||++++.+++
T Consensus 332 ~g~~~~~~yl~~y~~~~~~~F~~i~~~~~~~g~~~i~~l~GL~~~~P~~a~~~~i~~lSLaGiPP~~GF~~K~~if~~~~ 411 (498)
T CHL00049 332 DGYASMITYMLFYIFMNLGTFACIILFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGW 411 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999999999999998317204998771876469999999999999847201105999999999999
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCC------CCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 86599-9999999999999999999999972889876555--687889------12689999999999999772488999
Q gi|254780866|r 404 QNSNT-VAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQ--QLKDLS------LRERCMVYPIAVLTVFFGIYPVPIRD 474 (499)
Q Consensus 404 ~~~~~-~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~--~~~~~~------~~~~~~~~~l~~~~i~lGi~p~~~~~ 474 (499)
+++.+ +.++++++++++..||+|+++.+|+++++++... +.++.+ ......+.++.+..+..|++|+|+++
T Consensus 412 ~~g~~~l~~i~~l~Svis~~YYlrii~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~gi~~~pi~~ 491 (498)
T CHL00049 412 QAGLYFLVSIGLLTSVVSIYYYLKIIKLLMTGRNQEITPYVRNYRRSPWSLRSNNSIELSMIVCVIASTIPGISMNPIIA 491 (498)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_conf 86969999999999999999999999999328997667543457887400255564999999999999998825168999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780866|r 475 TFSVPL 480 (499)
Q Consensus 475 ~~~~~~ 480 (499)
..+++.
T Consensus 492 ~a~~~~ 497 (498)
T CHL00049 492 IAQDTL 497 (498)
T ss_pred HHHHHC
T ss_conf 998726
No 52
>MTH00206 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=587.99 Aligned_cols=444 Identities=34% Similarity=0.609 Sum_probs=381.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEEHHHHH
Q ss_conf 99999999999998720355303579999999999999999999986308888189998631348540546652258899
Q gi|254780866|r 8 IVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLGVDGISIL 87 (499)
Q Consensus 8 lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iD~ls~~ 87 (499)
+.+++|.+.+....+... ++..+......+.+....+..... .+.. | ...+..+++|++|..
T Consensus 2 L~iiip~~~~~~~~~~~~----~~~~w~~~~~~~~~~~~~~~~~~~----~~~~--------~--~~~~~~~~~D~lS~~ 63 (452)
T MTH00206 2 LKLILPYVMLIPMVLLCK----KKWLWRSTYVSSLLLALLVLLLWS----MNMS--------W--SSPNSYLSIDQVSAP 63 (452)
T ss_pred HHHHHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHHHHHHHH----CCCC--------C--CHHHHHHHHHHHHHH
T ss_conf 548999999999999827----699999999999999999999872----3777--------0--103378855575799
Q ss_pred HHHHHHHHHHHHHHHHCCCCCC----HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCC-CCCCC
Q ss_conf 9999999999999752011210----023567899986302430265404331112343103431235531234-33232
Q gi|254780866|r 88 LVVLTTFLTPFCILSSWKSIQE----NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGG-SERIY 162 (499)
Q Consensus 88 f~~l~~~i~~l~~~ys~~~~~~----~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~-~~~~~ 162 (499)
+..++..++.++.+|++++.++ +++.|+.++..+..++.+.+.|+|++++|++||.+++|+|.|+..||+ +||.+
T Consensus 64 l~~L~~~i~~l~~l~S~~~~~~~~~~~~~~f~~l~~~l~~~l~~~f~s~nl~~ffvf~E~~lip~~~LI~~wg~~~~r~~ 143 (452)
T MTH00206 64 LVILSCWLLPLMLLASQQHMKKEPGSRQRIYIFCLIFLQLFLILAFLATDLLLFYIAFEATLIPTLLLITRWGAQKERLQ 143 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 99999999999999989987408312789999999999999999999979999999999999999999997099889999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10001135544556776665544321000100344321013303789999854103444554000232010100022223
Q gi|254780866|r 163 AAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTA 242 (499)
Q Consensus 163 aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~ 242 (499)
|+.||++++.+|+..+++|+..+|..+|+.|+.++....+ ...+...+..+++||++|+|++|||.|+||+|+|||++
T Consensus 144 A~~~~~i~t~~gs~~lL~~i~~l~~~~gs~~~~~~~~~~~--~~~~~~~~~~~~l~f~vK~~~~pfH~WLP~Ah~eAP~~ 221 (452)
T MTH00206 144 AGTYFLFYTLVGSLPLLIALLKLYNSLGSLSMPIILENLS--SYSDNFWWLACLLAFLVKLPLYGLHLWLPKAHVEAPIA 221 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCH
T ss_conf 9999999999999999999999998827148999998846--66899999999999999987861001068777889809
Q ss_pred CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 44333323223332111000011122331000000000122222122111000024432233210013540233310487
Q gi|254780866|r 243 GSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGM 322 (499)
Q Consensus 243 ~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~ 322 (499)
+|++++|+.+|+|.|+++|+.....+ ....+...+..+|+.|+++|++.|++|+|+||++|||||+|+|+++.|++.++
T Consensus 222 ~S~iLagvllK~G~ygliR~~~~~~~-~~~~~~~~~~~l~~~~~~~~s~~al~Q~DlKrllAYSSishmG~i~~gl~~~~ 300 (452)
T MTH00206 222 GSMVLAGVLLKLGGYGMMRLSQLLGP-STKLSSEPFLILGLWGMIVTSSICLRQTDLKSLIAYSSVSHMGLVAAGIMSGT 300 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999871243-15899999999999999999999998733789999967999999999997378
Q ss_pred CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHH
Q ss_conf 54221023455542102333035677776420011110023556542023320134555530102444311228999999
Q gi|254780866|r 323 KSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSV 402 (499)
Q Consensus 323 ~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~ 402 (499)
+.|..|+++|+++|++.|+++|+.+|.+++|+||||++++||+.+++|.++..+.++.++++|+||+.||+||+.++.+.
T Consensus 301 ~~g~~gal~~mi~Hgl~~~~LF~~~g~i~~~~~tr~i~~~~GL~~~~P~~~~~~~i~~ls~~GiPp~~gF~se~~i~~~~ 380 (452)
T MTH00206 301 PWGFSGALMLMIAHGLVSSALFCLANLLYERSHTRTLLLNRGLQSIFPLMSFWWLLMFLANLALPPSINFFGELLIISSL 380 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_conf 88888889988999999999999988999334980299984558778999999999999987331205399999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98659999999999999999999999999728898765556878891268999999999999977248899
Q gi|254780866|r 403 FQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIR 473 (499)
Q Consensus 403 ~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~ 473 (499)
++.+++..+++.+++.+++.|++|.+.++++|+.++ +.++.+|.+.+|..++..+.+..+.+|++|+++.
T Consensus 381 ~~~~~~~~~~~~~~~~lsa~Y~l~l~~~~~~G~~~~-~~~~~~~~~~~e~~~~~~~~~p~~~l~~~p~~~~ 450 (452)
T MTH00206 381 FSWSNWTILLLGLGVLLTAVYSLYMFVMTQHGPTSK-HLKNLSPSTTREHLLLFLHLLPYILLILFPELIL 450 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 998499999999999999999999999998599931-2514899837799999999999999998479860
No 53
>COG0651 HyfB Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=0 Score=581.48 Aligned_cols=476 Identities=25% Similarity=0.473 Sum_probs=393.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEE
Q ss_conf 98307899999999999999872035530357999999999999999999998630888818999863134854054665
Q gi|254780866|r 1 MNLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLG 80 (499)
Q Consensus 1 m~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (499)
||. ++...+..|++...+.......+. ++..+..+..........+...+..... . ......|.++ .++.+.
T Consensus 1 ~~~-~~~~~i~~~l~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~-~gi~~~ 72 (504)
T COG0651 1 MNN-LLLLPIILPLLAAALLLLFLGLRR-LKAKRFLALLGALGLLLLSILGFLEVGG--P---VGGLGGWLAP-FGIVLA 72 (504)
T ss_pred CCH-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCC--C---CCCCCCCCCC-CEEEEE
T ss_conf 960-477899999999999999987767-8899999999999999999999999466--4---2001456787-106874
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 22588999999999999999752011210--0235678999863024302654043311123431034312355312343
Q gi|254780866|r 81 VDGISILLVVLTTFLTPFCILSSWKSIQE--NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS 158 (499)
Q Consensus 81 iD~ls~~f~~l~~~i~~l~~~ys~~~~~~--~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~ 158 (499)
.|.+|..|...++.++.++.+|+.+++++ +.+.|+.+++++..|+.+.+.++|++++|++||++++++|.|+.+++++
T Consensus 73 ~D~ls~~f~l~~~lv~~~~~iys~~~~~~~~~~~~~~~l~~l~~~g~~g~~~t~dlfnl~Vf~Ei~~isS~~Li~~~~~~ 152 (504)
T COG0651 73 ADPLSAIFLLIIALVGLLASLYSIGYMRHEKERAYYYFLLLLLLAGMLGAFLTGDLFNLYVFFEIMTLSSYFLVAHYGGR 152 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 20457999999999999999982898623330039999999999999999997559999999999999999999980876
Q ss_pred -CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC--CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf -32321000113554455677666554432100010034432101--330378999985410344455400023201010
Q gi|254780866|r 159 -ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSK--FPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNA 235 (499)
Q Consensus 159 -~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~--~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~ 235 (499)
++.++++||++++.+++.+++.|+.++|..+||+|+.++..... .+......++.++++|++.|+|+||+|.|+||+
T Consensus 153 ~~~~~a~~~Y~i~~~~~~~l~L~gv~lly~~tGtln~~~i~~~~~~~~~~~~~~~~~~L~ligf~~KaglfPlh~WLP~A 232 (504)
T COG0651 153 RRQASAGFKYLILGHIGTLLLLIGVGLLYAATGTLNFADIALKLSSELDPGLGIAAFLLLLIGFGVKAGLFPLHFWLPDA 232 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHEECHHH
T ss_conf 56664577887788689999999999999971720299887554203463589999999999999963765112331012
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC--CCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCH
Q ss_conf 002222344333323223332111000011122331--000000000122222122111000024432233210013540
Q gi|254780866|r 236 HVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLAS--QYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGY 313 (499)
Q Consensus 236 y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~--~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~ 313 (499)
|.+||+|+|+++|++++|+|+|+++|+....++... .++.+++..+|.+|+++|.++|+.|+|+||++|||||+|+||
T Consensus 233 ~~~ap~pvSAllS~v~~k~g~y~i~ril~~~~~~~~~~~~~~~~l~~~~~~t~i~G~~~Al~q~d~KRlLAYsti~q~G~ 312 (504)
T COG0651 233 HSEAPSPVSALLSGVLVKVGVYGILRILYLVFPLLGGAYLWGNLLIALGILTILFGVLYALLQKDIKRLLAYSTVSQMGY 312 (504)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 06796169999989999999999999999992640003578999999999999999999999999999999999988999
Q ss_pred HHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHC
Q ss_conf 23331048754221023455542102333035677776420011110023556542023320134555530102444311
Q gi|254780866|r 314 VTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFI 393 (499)
Q Consensus 314 i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~ 393 (499)
++++++.+++.++.++++|.+||++.|+.+|+++|.+.+++|+||+++++|+.|+||+++.++.++.++++|+||++||+
T Consensus 313 illg~~ig~~~~l~~ai~~~l~H~l~K~~LFL~aG~v~~~~g~~~i~~~gGl~~~~P~~~~~~~i~~lsl~GlPp~~GF~ 392 (504)
T COG0651 313 ILLGLGIGTPLGLAGAIFHLLNHALVKALLFLGAGAVLYRTGTRDLEKLGGLAKRMPLTAVAFLIGALSLAGLPPFNGFI 392 (504)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 99999966805799999999999999999999711899972733197703747545399999999999980798505389
Q ss_pred CHHHHHHHHHH-----HHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 22899999998-----6599-99999999999999999999999728898765556878891268999999999999977
Q gi|254780866|r 394 GEFLVIMSVFQ-----NSNT-VAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGI 467 (499)
Q Consensus 394 ~k~~i~~~~~~-----~~~~-~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi 467 (499)
|||+++++..+ ...+ ...+..+.+.....++.|...+.++++.++ ...+.++.+..+..++.+++..++.+|+
T Consensus 393 sk~~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ila~~~i~~g~ 471 (504)
T COG0651 393 SKFLLIQALFKANALLAILIILAALILLASLATFISLARIFMLLFFGQGAP-IERDVPEVPLLMLAPMVILAILCLVLGL 471 (504)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-HHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999987622236999999999999999999999999999986034674-1015542148888879999999999986
Q ss_pred HHHHHHHHHH-HHHHHHHH
Q ss_conf 2488999999-99999985
Q gi|254780866|r 468 YPVPIRDTFS-VPLSSIIE 485 (499)
Q Consensus 468 ~p~~~~~~~~-~~~~~l~~ 485 (499)
.|+++.+... +.....++
T Consensus 472 ~~~~~~~~~~~~~~~~~~~ 490 (504)
T COG0651 472 APDPLLPKILQAAAAILLV 490 (504)
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 1799999888899998712
No 54
>MTH00068 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=573.62 Aligned_cols=399 Identities=33% Similarity=0.570 Sum_probs=363.2
Q ss_pred EEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC----HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEE
Q ss_conf 05466522588999999999999999752011210----02356789998630243026540433111234310343123
Q gi|254780866|r 75 CSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQE----NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFV 150 (499)
Q Consensus 75 ~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~----~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~ 150 (499)
.+..+++|++|.+++.+++.++.+..++|+++.++ |.+.|+.+++.+..++.+.+.|+|++.+|++||.+.+|+|.
T Consensus 52 ~~~~~gvD~lS~~li~Lt~~l~~l~ilaS~~~~~~~~~~r~~~f~~l~l~l~~~l~~~F~s~dl~lFyiffE~~LIp~~~ 131 (458)
T MTH00068 52 TNKYLGIDQISSPLLILTCWLLPLMILASQNHLKNNPLNRQRMYISMLIILQLTLILAFSATELILFYIAFEATLIPTLI 131 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 72888017868999999999999999995799841852038899999999999999999996899999999999999999
Q ss_pred EEEECCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC--CCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 5531234-332321000113554455677666554432100010034432101--3303789999854103444554000
Q gi|254780866|r 151 IIGVWGG-SERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSK--FPFSIQYWMWIAFFCSFAIKIPMFP 227 (499)
Q Consensus 151 Li~~~~~-~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~--~~~~~~~~~~~ll~~g~~~K~~~~P 227 (499)
+|..||+ +||.+|+.|+++++.+||..++.|+..+|..+|++|+..+..... .....+...+..+++||++|+|++|
T Consensus 132 LI~~wG~~~~r~~A~~~~~~yT~~gSl~lL~~i~~ly~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~llaF~vK~p~~p 211 (458)
T MTH00068 132 IITRWGNQAERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLTLLELMPPMQLMTYTNKIWWLACLLAFMVKMPLYG 211 (458)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99986997689999999999999999999999999999759973999999887754367999999999999999767888
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCC
Q ss_conf 23201010002222344333323223332111000011122331000000000122222122111000024432233210
Q gi|254780866|r 228 FHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSS 307 (499)
Q Consensus 228 fH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySs 307 (499)
+|.|+||+|.|||+++|++++|++.|+|.|+++|+.. .+++....+...+.++|.+++++|++.|++|+|+||++||||
T Consensus 212 ~H~WLP~Ah~eAP~~~S~ilagvllK~G~YgliR~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~al~Q~DlKrliAYSS 290 (458)
T MTH00068 212 LHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISI-MLTPLSKELSYPFIILALWGVLMTSLICMRQTDLKSLIAYSS 290 (458)
T ss_pred CCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 8866616544598078999999999998999999975-144258999999999999999999999998236669999987
Q ss_pred CCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCH
Q ss_conf 01354023331048754221023455542102333035677776420011110023556542023320134555530102
Q gi|254780866|r 308 IAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLP 387 (499)
Q Consensus 308 i~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~P 387 (499)
|+|||+++.|+..+++.|..|+++|+++|++.|+++|+.+|.+++|+||||++++||+.+++|.++..+.++.++..|+|
T Consensus 291 vshmG~i~~gi~~~~~~g~~Gal~~mi~Hgl~ss~LF~l~g~~y~r~~tr~i~~~~Gl~~~~P~~~~~~~i~~la~~g~P 370 (458)
T MTH00068 291 VSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLINLSNMALP 370 (458)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999973768899999999999999999999999999704862488848955554899999999999971788
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 44431122899999998659999999999999999999999999728898765556878891268999999999999977
Q gi|254780866|r 388 GTSGFIGEFLVIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGI 467 (499)
Q Consensus 388 p~~GF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi 467 (499)
|++||+||++++.+.++..++...++.++..+++.|++|.+.+.++|+.+. ..+...|.+.||...+....+..+.+|+
T Consensus 371 p~~gF~gE~~il~~~~~~~~~~~~~~~~~~~lsa~YsL~l~~~~~~G~~~~-~~~~~~~~~~rE~~ll~lh~~pl~~l~~ 449 (458)
T MTH00068 371 PSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPN-HLKTLFPTYTREHLLLALHILPMLLLIL 449 (458)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH-HCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 756489999999999998499999999999999999999999997699815-2015899718999999999999999998
Q ss_pred HHHHHHHH
Q ss_conf 24889999
Q gi|254780866|r 468 YPVPIRDT 475 (499)
Q Consensus 468 ~p~~~~~~ 475 (499)
+|+.+.+.
T Consensus 450 ~p~li~~~ 457 (458)
T MTH00068 450 KPELISGM 457 (458)
T ss_pred HHHHHHCC
T ss_conf 39998334
No 55
>MTH00150 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=572.24 Aligned_cols=398 Identities=32% Similarity=0.572 Sum_probs=364.7
Q ss_pred CEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEE
Q ss_conf 40546652258899999999999999975201121--0023567899986302430265404331112343103431235
Q gi|254780866|r 74 FCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVI 151 (499)
Q Consensus 74 ~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~L 151 (499)
..++.+.+|++|..++.++..++.++.+++.++.+ ++.++|+.+++++..++.+++.|+|++++|++||++++|+|.|
T Consensus 46 ~~~~~f~~D~lS~~~i~L~~~i~~l~~l~S~~~~~~~~~~~~f~~l~lll~~~m~~~f~s~dl~~fyif~E~~lip~~~L 125 (447)
T MTH00150 46 SLNGLFSVDSMSGLLIFLSLWISGLMLLASQYSVKLENKSSSFSLCVLLLCLILVLAFSSSNFFMFYIFFEASLIPTLLL 125 (447)
T ss_pred HHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 42442201250699999999999999999889986053116999999999999999999979999999999999999999
Q ss_pred EEECCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 5312343-323210001135544556776665544321000100344321013303789999854103444554000232
Q gi|254780866|r 152 IGVWGGS-ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHT 230 (499)
Q Consensus 152 i~~~~~~-~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~ 230 (499)
+..|+++ +|.+|+.|+++++..|+..+++|+..+|..+|++|+.++....+. ........+++.|+++|+|++|||.
T Consensus 126 I~~~g~~~~~~~A~~~~~~~t~~gsl~lL~~i~~ly~~~gs~~~~~~~~~~~~--~~~~~~~~~~~l~f~vK~p~fPfH~ 203 (447)
T MTH00150 126 IIGWGYQPERLQAGMYMMLYTVGASLPLLLVLLWLSVSYGSSFMLLISYLLSY--SVMWLWGLGVFLAFLVKLPMYPFHL 203 (447)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHEEC
T ss_conf 99838987999999999999999999999999999998087489999987221--0799999999999999838982111
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
Q ss_conf 01010002222344333323223332111000011122331000000000122222122111000024432233210013
Q gi|254780866|r 231 WLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAH 310 (499)
Q Consensus 231 WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~ 310 (499)
|+||+|+|||+++|++++|+++|+|.|+++|+. +.++.....+...+..+++.|+++|++.|++|+|+||++|||||+|
T Consensus 204 WLPdAh~eAP~~~S~lLagvl~K~G~ygliR~~-~~~~~~~~~~~~~l~~l~~~~~v~g~l~al~Q~DlKrllAYSSIsh 282 (447)
T MTH00150 204 WLPKAHVEAPVAGSMILAGVLLKLGGYGIMRMM-SVFNLSSSSFSVLLISLSLWGGVLTSIICLRQSDLKSLIAYSSVGH 282 (447)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 076323648769999999999999999999999-8510018999999999999999999999999999869998970987
Q ss_pred CCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHH
Q ss_conf 54023331048754221023455542102333035677776420011110023556542023320134555530102444
Q gi|254780866|r 311 MGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTS 390 (499)
Q Consensus 311 ~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~ 390 (499)
+|+++++++.+++.|..|+++|+++|++.|+++|+++|.+++|+||||++++||+.+++|.++..+.++.++++|+||++
T Consensus 283 mG~il~gi~~~~~~g~~gal~~mi~Hgl~~~~LF~~~g~i~~~~~tr~i~~~~Gl~~~~P~~~~~~~i~~la~~GiPp~~ 362 (447)
T MTH00150 283 MSLVLAGVLSNTSWGWEGALIMMVSHGFCSSGLFCLANLTYEKVHSRSLFLMKGMLNVYPMLSLWWFLFCIANMGAPPFL 362 (447)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 89999999823789999999999999999999999974887325876557339984420899999999999975143105
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 31122899999998659999999999999999999999999728898765556878891268999999999999977248
Q gi|254780866|r 391 GFIGEFLVIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPV 470 (499)
Q Consensus 391 GF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~ 470 (499)
||+||++++.+.++.+++..+++.++..+++.|++|.+.++++|+.++ ..++..|.+.+|...+.........++++|+
T Consensus 363 gF~se~~i~~~~~~~~~~~~~~~~l~~~lsa~Ysl~l~~~~~~G~~~~-~~~~~~~~~~~e~~~~~~h~~p~~~~~~~~~ 441 (447)
T MTH00150 363 NLLGEIMLFPSLYFYSPWFLVILGLMVFLSGLYNLYLYTSIQHGSVSS-FLKPSFVNKSSEYLLLFLHFYPLLLLFLNPG 441 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCEECCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 099999999999999799999999999999999999999975798842-3611899836999999999999999998499
Q ss_pred HHHHH
Q ss_conf 89999
Q gi|254780866|r 471 PIRDT 475 (499)
Q Consensus 471 ~~~~~ 475 (499)
.+.+.
T Consensus 442 ~~~~~ 446 (447)
T MTH00150 442 FLSKI 446 (447)
T ss_pred HHHCC
T ss_conf 98367
No 56
>MTH00110 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=569.71 Aligned_cols=398 Identities=34% Similarity=0.593 Sum_probs=361.9
Q ss_pred EEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC----HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEE
Q ss_conf 5466522588999999999999999752011210----023567899986302430265404331112343103431235
Q gi|254780866|r 76 SYHLGVDGISILLVVLTTFLTPFCILSSWKSIQE----NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVI 151 (499)
Q Consensus 76 ~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~----~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~L 151 (499)
+..+++|++|.+++.++..+..++.++|+++.++ ++|.|+.+++++..++.+.+.++|++++|++||.+.+|+|.+
T Consensus 53 ~~~~~~D~lS~~li~Ls~~i~~l~~laS~~~~~~~~~~~~~~f~~~~l~l~~~l~~~F~~~dl~~FYiffE~~LIP~~~L 132 (459)
T MTH00110 53 SLLFFSDSLSTPLLILTTWLLPLMLMASQNHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLII 132 (459)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 15760148689999999999999999968988417512567999999999999999999848999999999999999999
Q ss_pred EEECCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC-CCH-HHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 531234-332321000113554455677666554432100010034432101-330-37899998541034445540002
Q gi|254780866|r 152 IGVWGG-SERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSK-FPF-SIQYWMWIAFFCSFAIKIPMFPF 228 (499)
Q Consensus 152 i~~~~~-~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~-~~~-~~~~~~~~ll~~g~~~K~~~~Pf 228 (499)
|..||+ +||.+|+.||++++.+||..+++++..+|..+|++|+..+..... .+. ..+.+.++.+++||++|+|++|+
T Consensus 133 I~~wG~~~er~~A~~~~~~yT~~gSl~lL~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~l~~~laF~vK~p~fp~ 212 (459)
T MTH00110 133 ITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGL 212 (459)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99849957999999999999999999999999999997598609999988751450479999999999999997488888
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCC
Q ss_conf 32010100022223443333232233321110000111223310000000001222221221110000244322332100
Q gi|254780866|r 229 HTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSI 308 (499)
Q Consensus 229 H~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi 308 (499)
|.|+||+|.|||+++|++++|++.|+|.|+++|+..++.|.. ......+..+++.+++++++.|++|+|+||++|||||
T Consensus 213 H~WLP~AhveAP~~gSmiLAgvLlKlG~YGl~R~~~~~~~~~-~~~~~~~i~l~l~g~i~~s~~~l~Q~DlK~LiAYSSV 291 (459)
T MTH00110 213 HLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITILLNPLT-EFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSV 291 (459)
T ss_pred CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 665725325097599999999999998999999999984789-9999999999999999999999999999999999779
Q ss_pred CCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHH
Q ss_conf 13540233310487542210234555421023330356777764200111100235565420233201345555301024
Q gi|254780866|r 309 AHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPG 388 (499)
Q Consensus 309 ~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp 388 (499)
+|||+++.|+..+++.|..|+++|+++|++.|+++|+++|.+|+|+||||++++||+.+++|.++..+.++.++..|+||
T Consensus 292 sHMG~v~~gi~~~~~~g~~Ga~~~miaHgl~ss~LF~lag~~y~r~~tR~l~~~~Gl~~~~P~~~~~~~l~~lan~g~Pp 371 (459)
T MTH00110 292 SHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPP 371 (459)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999755899999999999999999999998879988618606787198045658999999999998717987
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 44311228999999986599999999999999999999999997288987655568788912689999999999999772
Q gi|254780866|r 389 TSGFIGEFLVIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIY 468 (499)
Q Consensus 389 ~~GF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~ 468 (499)
+.||+||++++.+.++..++...++.++..+++.|++|.+.++++|+.+++ .+..+|.+.||...+....+..+.+|++
T Consensus 372 ~~~F~gE~~il~~~~~~~~~~~~~~~~~~~lsa~Ysl~l~~~~~~G~~~~~-~~~~~~~~~re~~~~~~h~~pl~~l~l~ 450 (459)
T MTH00110 372 TINLIGELFVIMSSFSWSNITIILMGLNIVITALYSLYMLITTQRGKLTHH-INNIKPSFTRENTLMALHLLPLLLLSLN 450 (459)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 464899999999999985999999999999999999999999877998021-2478996088999999999999999978
Q ss_pred HHHHHHH
Q ss_conf 4889999
Q gi|254780866|r 469 PVPIRDT 475 (499)
Q Consensus 469 p~~~~~~ 475 (499)
|+.+.++
T Consensus 451 P~~ilg~ 457 (459)
T MTH00110 451 PKIILGP 457 (459)
T ss_pred HHHHHCC
T ss_conf 7987189
No 57
>MTH00124 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=567.06 Aligned_cols=398 Identities=34% Similarity=0.584 Sum_probs=361.6
Q ss_pred EEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC----HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEE
Q ss_conf 05466522588999999999999999752011210----02356789998630243026540433111234310343123
Q gi|254780866|r 75 CSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQE----NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFV 150 (499)
Q Consensus 75 ~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~----~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~ 150 (499)
.+..+++|++|..++.++..+..+..++|+++.++ |.+.|+.+++++..++.+.+.|+|++++|++||.+.+|+|.
T Consensus 52 ~~~~~g~D~lS~~li~Lt~~i~~l~il~S~~~~~~~~~~~~~~F~~~~l~l~~~l~~~F~s~dl~~FyiffE~~lIp~~l 131 (457)
T MTH00124 52 SNQWLGIDQISAPLLVLSCWLLPLMIMASQNHLQHEPTQRKRTFITTLILLQPFLILAFSATELMLFYIMFEATLIPTLI 131 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87999258878999999999999999998799852740028899999999999999999995899999999999999999
Q ss_pred EEEECCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH--CCCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 5531234-33232100011355445567766655443210001003443210--13303789999854103444554000
Q gi|254780866|r 151 IIGVWGG-SERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMS--KFPFSIQYWMWIAFFCSFAIKIPMFP 227 (499)
Q Consensus 151 Li~~~~~-~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~--~~~~~~~~~~~~ll~~g~~~K~~~~P 227 (499)
||..||+ +||.+|+.|+++++.+||..++.|+..+|..+|+.|+..+.... ..+...+.+.++.++.||++|+|++|
T Consensus 132 LI~~wG~~~er~~A~~~~~~yT~~gSl~lL~~i~~l~~~~gt~~~~~~~~~~~~~~~~~~~~~~~l~~~laF~vK~p~fp 211 (457)
T MTH00124 132 LITRWGNQPERLNAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLALLTAFMVKMPLYG 211 (457)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99886895899999999999999989999999999999769862999997624212417999999999999998668998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCC
Q ss_conf 23201010002222344333323223332111000011122331000000000122222122111000024432233210
Q gi|254780866|r 228 FHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSS 307 (499)
Q Consensus 228 fH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySs 307 (499)
+|.|+||+|.|||+++|++++|+..|+|.|+++|+... ++.....+...+..+++.+++++++.|++|+|+||++||||
T Consensus 212 ~H~WLP~Ah~eAP~~gSmiLAgvllKlG~YgliR~~~~-~~~~~~~~~~~~i~l~l~g~i~~sl~al~Q~DlKrliAYSS 290 (457)
T MTH00124 212 LHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLL-LPPLSNTLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSS 290 (457)
T ss_pred CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88762056433870799999999999999999999998-51568999999999999999999999976101999999989
Q ss_pred CCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCH
Q ss_conf 01354023331048754221023455542102333035677776420011110023556542023320134555530102
Q gi|254780866|r 308 IAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLP 387 (499)
Q Consensus 308 i~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~P 387 (499)
|+|||+++.++..+++.|..|+++|+++|++.|+++|+.+|.+|+|+||||++++||+.+++|.++..+.++.++..|+|
T Consensus 291 VsHMG~v~~gi~~~~~~g~~Ga~~~miaHgl~ss~LF~lag~iy~r~~tr~i~~~~Gl~~~~P~~~~~~~i~~la~~g~P 370 (457)
T MTH00124 291 VSHMGLVIAAILIQTQWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALP 370 (457)
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999967950068999999989999999999999999961871599849905557889999999999975064
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 44431122899999998659999999999999999999999999728898765556878891268999999999999977
Q gi|254780866|r 388 GTSGFIGEFLVIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGI 467 (499)
Q Consensus 388 p~~GF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi 467 (499)
|+.||+||.+++.+.++..++....+.++..+++.|.+|.+.++++|+.++ +.+..+|.+.||...+....+..+.+|+
T Consensus 371 p~~gF~gE~lil~~~~~~~~~~~~~~~~~~~lsa~YsL~l~~~~~~G~~~~-~~~~~~~~~~re~~~l~~h~~pl~~l~~ 449 (457)
T MTH00124 371 PTINLMGELTIISSLFNWSPTTIILTGLGTLLTASYTLYMFLSTQRGTLPT-HITTIQPTHTREHLLMTLHILPLLLLIL 449 (457)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH-HCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 426199999999999999799999999999999999999999987599804-1247899838999999999999999996
Q ss_pred HHHHHHH
Q ss_conf 2488999
Q gi|254780866|r 468 YPVPIRD 474 (499)
Q Consensus 468 ~p~~~~~ 474 (499)
+|+.+..
T Consensus 450 ~p~l~~~ 456 (457)
T MTH00124 450 KPELISG 456 (457)
T ss_pred HHHHHCC
T ss_conf 3567248
No 58
>MTH00066 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=556.24 Aligned_cols=399 Identities=20% Similarity=0.334 Sum_probs=347.8
Q ss_pred EEEEECCC---CCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHH
Q ss_conf 98631348---540546652258899999999999999975201121--0023567899986302430265404331112
Q gi|254780866|r 65 IEYYHWID---YFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYI 139 (499)
Q Consensus 65 ~~~~~~~~---~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v 139 (499)
...++|.+ ..+++++.+|.+|..|..++.+++..+..||..|++ ++.+||+.+++++..+|.+++.|+|++++|+
T Consensus 61 ~~~~~w~~~~~~~~~~~f~~D~~S~~f~~vv~~Is~~V~~yS~~YM~~d~~~~rF~~~l~lF~~sMl~lv~s~Nl~~lfi 140 (598)
T MTH00066 61 TTNFHWMSINNFNINSSFKFDQYSILFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFI 140 (598)
T ss_pred EEEEECCEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 77525402477361777532862899999999999999999789707899814899999999999999999805999999
Q ss_pred HHHHCCCCCEEEEEECC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCC
Q ss_conf 34310343123553123-43323210001135544556776665544321000100344321013303789999854103
Q gi|254780866|r 140 FFEASLIPMFVIIGVWG-GSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCS 218 (499)
Q Consensus 140 ~~El~~l~~~~Li~~~~-~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g 218 (499)
+||.+++++|.||++|. ++++.+|+.|+++++++|+..++.|+..++...|++|++++....+. .......+++|
T Consensus 141 gWEgvgl~SylLI~~~~~~~~a~~aa~~a~l~nriGd~~lll~i~~l~~~~gs~~~~~~~~~~~~----~~~~~l~lila 216 (598)
T MTH00066 141 GWEGVGIMSFLLIGWWHARSDANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLYDN----STLPLLGLILA 216 (598)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCH----HHHHHHHHHHH
T ss_conf 99999999999998874976789999999999977599999999999998398109999874640----69999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEC
Q ss_conf 44455400023201010002222344333-32322333211100001112233100000000012222212211100002
Q gi|254780866|r 219 FAIKIPMFPFHTWLPNAHVQAPTAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQT 297 (499)
Q Consensus 219 ~~~K~~~~PfH~WlP~~y~~ap~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~ 297 (499)
...|+||+|||.||||+ +||||||||++ |++++|+|+|.++|+. +++.. ++.....+..+|.+|+++|+..|+.|+
T Consensus 217 a~~KSAQfP~h~WLP~A-MeaPTPVSALlHSsTmV~AGVylLiR~~-~~~~~-~~~~~~~~l~lG~lT~l~a~~~Al~Q~ 293 (598)
T MTH00066 217 ATGKSAQFGLHPWLPAA-MEGPTPVSALLHSSTMVVAGIFLLIRFH-PLLEN-NQTALTICLCLGALTTLFTAACALTQN 293 (598)
T ss_pred HHHHHCCCCCCHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 98743318670422666-1489960233312589885088989988-78741-699999999999999999999998632
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH-HCCCCCCHHHHHHHHHHCCCCCH
Q ss_conf 44322332100135402333104875422102345554210233303567777642-00111100235565420233201
Q gi|254780866|r 298 DIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDR-LHTRDIFAYGGLVHNMPRYAVVM 376 (499)
Q Consensus 298 d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~-~g~~~l~~l~Gl~~~~P~~~~~~ 376 (499)
|+||++||||+||+|+|+++++.+.+ ..+++|+++|+++|+.+|+|+|.+.++ .+++|+|++||+.|++|++..++
T Consensus 294 DiKkilAyST~SQLG~M~~~iglg~~---~lA~fHl~~HA~FKAlLFL~aG~iIh~~~~~qDir~mGgl~~~mP~T~~~~ 370 (598)
T MTH00066 294 DIKKIVAFSTSSQLGLMMVTIGLNQP---QLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQNMLPMTTSCL 370 (598)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHH
T ss_conf 18899998999899999999872519---899999999999999999830489863577135988089887766999999
Q ss_pred HHHHHHHCCCHHHHHHCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 345555301024443112289999999865--999999999999999999999999972889876555687889126899
Q gi|254780866|r 377 MVFTMANMGLPGTSGFIGEFLVIMSVFQNS--NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCM 454 (499)
Q Consensus 377 ~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 454 (499)
.++.+|++|+||++||+||+.|+|+...++ .+...+..+++.+++.|+.|....++.++++.+.....+|.++.+..|
T Consensus 371 ~ig~laL~G~PflsGF~SKD~Ile~~~~~~~n~~~~~~~~~~~~lT~~Ys~Rl~~~~~~~~~~~~~~~~~~E~~~~m~~p 450 (598)
T MTH00066 371 TIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNKLIINP 450 (598)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99999996440432887589999998857458999999999999999999999999964899888777878896789999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999977248899
Q gi|254780866|r 455 VYPIAVLTVFFGIYPVPIR 473 (499)
Q Consensus 455 ~~~l~~~~i~lGi~p~~~~ 473 (499)
+..++..+|..|..-.+..
T Consensus 451 l~~La~gsI~~G~~~~~~~ 469 (598)
T MTH00066 451 IKRLAWGSIIAGLLIINNI 469 (598)
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999987
No 59
>PRK07234 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=557.11 Aligned_cols=416 Identities=20% Similarity=0.325 Sum_probs=341.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEE
Q ss_conf 98307899999999999999872035530357999999999999999999998630888818999863134854054665
Q gi|254780866|r 1 MNLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLG 80 (499)
Q Consensus 1 m~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (499)
||- +..+.+.+|++++++..+.+.. .+..+...+.+....+........+. .. .|.+ ..+++++
T Consensus 1 M~~-L~il~I~lP~l~a~~~~llp~~------~r~lal~~~ll~~~~~~~l~~~~~~~--~~------~~~~-~~gi~l~ 64 (456)
T PRK07234 1 MTS-LTIVWIALPFLLGFAIYLLPKL------DRYLALGVALLSAVYAVGIVASMVPL--EL------VLLD-NFGVTLR 64 (456)
T ss_pred CCC-HHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHCCCC--CE------EECC-CCEEEEE
T ss_conf 970-7999999999999999980530------59999999999999999999953775--21------4358-7607988
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf 22588999999999999999752011210023567899986302430265404331112343103431235531234332
Q gi|254780866|r 81 VDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSER 160 (499)
Q Consensus 81 iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~ 160 (499)
+|++|..|..++++++..+.+|++++ ++.++|+.+++++.+++++++.|+|++++|++||++++++|.|+++++++++
T Consensus 65 vD~lS~~flll~~lv~~~v~lys~~~--~~~~~f~~llll~~~~m~~~f~s~dl~~lfv~~E~~~i~sy~LI~~~~~~~~ 142 (456)
T PRK07234 65 IDALSGYFILTNALVTLAVIFYCWES--AKTAFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVTYPRTDRS 142 (456)
T ss_pred ECHHHHHHHHHHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 65766999999999999999997077--8750899999999999999999826999999999999999886431898999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 32100011355445567766655443210001003443210133037899998541034445540002320101000222
Q gi|254780866|r 161 IYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAP 240 (499)
Q Consensus 161 ~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap 240 (499)
.+|+.||++++.+|+.++++|+..+|..+||+|++++....+ ....++++|+++|+|++|||.|+||+|+++|
T Consensus 143 ~~Aa~kyli~~~~g~~~~L~gi~lly~~~Gt~~~~~l~~~~~-------~~~~li~~g~~~K~a~fP~H~WLPda~~~ap 215 (456)
T PRK07234 143 IWVGLRYLFLSNVAMLFYLIGAVLVYQANGSFAFSGLAGADP-------EALALIFLGLLVKGGIFVSGLWLPLTHSEAE 215 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
T ss_conf 999999999999999999999999999981199999987647-------8999999999999707303877620406898
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 23443333232233321110000111223310000000001222221221110000244322332100135402333104
Q gi|254780866|r 241 TAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFS 320 (499)
Q Consensus 241 ~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~ 320 (499)
+++|+++|++++|+|+|+++|+..... ....++.++|++|+++|++.|+.|+|+||++|||||+|+|||+++...
T Consensus 216 ~~~s~llSg~~vk~Gvy~liR~~~~~~-----~~~~il~~lg~~t~l~g~~~Al~Q~DiKrlLAYSsISq~G~il~a~~~ 290 (456)
T PRK07234 216 PPVSALLSGVVVKAGVFPLVRCALDVY-----GLDPVVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV 290 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999876-----189999999999999999999863313699999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHH
Q ss_conf 87542210234555421023330356777764200111100235565420233201345555301024443112289999
Q gi|254780866|r 321 GMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIM 400 (499)
Q Consensus 321 ~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~ 400 (499)
+.+|.++|+++|+.+|+++|.+++|+||+|++|++|+.|+||.+ ++.+|++|+||++||+|||++++
T Consensus 291 --------g~~~~l~Hal~Ka~LFl~aG~i~~~~~t~~i~~~gGl~~~mPl~-----i~~lsi~GiPp~~GF~sK~lil~ 357 (456)
T PRK07234 291 --------GGLYALAHGLVKSTLFLCAGALPSRNFKELIQKMIGRGKWIPLV-----MASFSISGFPLLAGFVAKALTLK 357 (456)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHH-----HHHHHHHCCCCCCHHHHHHHHHH
T ss_conf --------99999999999999999998999824874599838868898999-----99999870542038999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99986599999999999999999999999997288987655568788912689999999999999772488
Q gi|254780866|r 401 SVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVP 471 (499)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~ 471 (499)
+... |......++++.++.|+.|.++..+++..++ +.....+...+..+++.-|++++.
T Consensus 358 ~~~~---w~~~~~~ia~v~ta~~~~r~i~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 416 (456)
T PRK07234 358 NLLP---WQAIALNIAAVGTAASFAKFIFLPFFESEKK---------PGFWPAVLLLLGGLFLANGVYYEA 416 (456)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 7788---9999999999999999999999997424678---------984088999996699886767987
No 60
>MTH00004 ND5 NADH dehydrogenase subunit 5; Validated
Probab=100.00 E-value=0 Score=551.70 Aligned_cols=397 Identities=21% Similarity=0.345 Sum_probs=347.5
Q ss_pred EEEEECC---CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHH
Q ss_conf 9863134---8540546652258899999999999999975201121--0023567899986302430265404331112
Q gi|254780866|r 65 IEYYHWI---DYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYI 139 (499)
Q Consensus 65 ~~~~~~~---~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v 139 (499)
...++|+ +..+++++.+|.+|..|..++.+++..+..||.+|++ ++.+||+.+++++..+|.+++.|+|++++++
T Consensus 63 ~~~~~w~~~~~~~i~~~f~~D~lS~~f~~vv~~Is~~I~~yS~~YM~~d~~~~rF~~~l~lF~~sMl~lV~s~Nl~~lfi 142 (604)
T MTH00004 63 TTNWEWKFTPNFNIPISFKLDQYSLMFLPIALFVTWSILEFATWYMASDPHITKFFKYLLIFLIAMLILTTANNMFQLFI 142 (604)
T ss_pred EEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 99736102087160677632863999999999999999999689707899916899999999999999999730999999
Q ss_pred HHHHCCCCCEEEEEECCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCC
Q ss_conf 3431034312355312343-323210001135544556776665544321000100344321013303789999854103
Q gi|254780866|r 140 FFEASLIPMFVIIGVWGGS-ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCS 218 (499)
Q Consensus 140 ~~El~~l~~~~Li~~~~~~-~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g 218 (499)
+||.+++++|.||++|+++ ++.+|+.|+++++++|+..++.|+..++...|++|++++....+ ...+..+.++++
T Consensus 143 gWEgvGl~SylLI~~~~~r~~a~~aa~ka~i~nRiGD~~lll~i~~l~~~~gt~~~~~~~~~~~----~~~l~~l~lila 218 (604)
T MTH00004 143 GWEGVGIMSFLLIGWWHGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFSQTQ----TPLLPLLGLILA 218 (604)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHCCC----HHHHHHHHHHHH
T ss_conf 9999999999888450697688999999999983126999999999999948843999883640----589999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEC
Q ss_conf 444554000232010100022223443333-2322333211100001112233100000000012222212211100002
Q gi|254780866|r 219 FAIKIPMFPFHTWLPNAHVQAPTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQT 297 (499)
Q Consensus 219 ~~~K~~~~PfH~WlP~~y~~ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~ 297 (499)
...|+||+|||.||||+ +||||||||++| ++++|+|+|.++|+. +++.. ++.....+.++|.+|+++|+..|+.|+
T Consensus 219 a~gKSAQfPfh~WLP~A-MeaPTPVSALlHssTmV~AGVylliR~~-~l~~~-~~~~~~~~l~~G~lT~l~aa~~Al~Q~ 295 (604)
T MTH00004 219 ATGKSAQFGLHPWLPAA-MEGPTPVSALLHSSTMVVAGIFLLIRTH-PILQN-NQTALTICLCLGALTTLFAATCALTQN 295 (604)
T ss_pred HHHHCCCCCCCCCCHHH-HCCCCCHHHHHCCCHHHHHHHHHHHHHH-HHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99840427772014677-5589936766244301246799999999-99865-799999999999999999999997223
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH-HCCCCCCHHHHHHHHHHCCCCCH
Q ss_conf 44322332100135402333104875422102345554210233303567777642-00111100235565420233201
Q gi|254780866|r 298 DIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDR-LHTRDIFAYGGLVHNMPRYAVVM 376 (499)
Q Consensus 298 d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~-~g~~~l~~l~Gl~~~~P~~~~~~ 376 (499)
|+||++||||++|+|+|+.+++.+.+ ..+++|+++|+++|+.+|+|+|.+.+. .|++|++++||+.|++|+++.++
T Consensus 296 DiKkiiAyST~SQLG~M~~~iglg~~---~lA~fHl~~HA~FKAlLFL~aGsiIH~~~~~qDir~mGgl~~~mP~t~~~~ 372 (604)
T MTH00004 296 DIKKIIAFSTSSQLGLMMVTIGLNQP---QLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITTSCL 372 (604)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHH
T ss_conf 18789998899899999999974639---999999998899999999810599970578620998679862038999999
Q ss_pred HHHHHHHCCCHHHHHHCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 345555301024443112289999999865--999999999999999999999999972889876555687889126899
Q gi|254780866|r 377 MVFTMANMGLPGTSGFIGEFLVIMSVFQNS--NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCM 454 (499)
Q Consensus 377 ~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 454 (499)
.++.+|++|+||++||+||+.|+|....++ .+...+..+++.+++.|++|.+..+++++++.+.....+|.++.+..|
T Consensus 373 ~igslsL~G~PflsGFySKD~IlE~~~~s~~n~~~~~~~~~~~~lT~~Ys~Rl~~~~~~~~~~~~~~~~~~E~~~~m~~P 452 (604)
T MTH00004 373 TIGNLALMGTPFLAGFYSKDLIIETLNTSYLNAWALLLTLLATSFTATYSLRMTLLVQTGFPRTPPLTPINENNPTITNP 452 (604)
T ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99999852677432241169999999857508999999999999999999999999980899888878878896899999
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 99999999999772488
Q gi|254780866|r 455 VYPIAVLTVFFGIYPVP 471 (499)
Q Consensus 455 ~~~l~~~~i~lGi~p~~ 471 (499)
+..++..+|..|..-.+
T Consensus 453 l~~La~~sI~~G~l~~~ 469 (604)
T MTH00004 453 ITRLALGSIIAGLLISS 469 (604)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999
No 61
>MTH00114 consensus
Probab=100.00 E-value=0 Score=553.79 Aligned_cols=399 Identities=22% Similarity=0.361 Sum_probs=349.6
Q ss_pred EEEEEECC---CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHH
Q ss_conf 99863134---8540546652258899999999999999975201121--002356789998630243026540433111
Q gi|254780866|r 64 MIEYYHWI---DYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFY 138 (499)
Q Consensus 64 ~~~~~~~~---~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~ 138 (499)
....++|+ +..+++++.+|.+|..|..++.+++..+..||.+|++ ++.+||+.+++++..+|.+++.|+|+++++
T Consensus 58 ~~~~~~w~~~~~~~i~~sf~~D~lS~~f~~vv~~Is~~V~~yS~~YM~~d~~~~rF~~~l~lF~~sMl~Lv~s~Nl~~lf 137 (600)
T MTH00114 58 TITNFPWINTSTFNINISFTFDTYSLMFIPIALFVTWSILEFSHWYMSTDPNINKFFKYLLIFLIAMLILITANNMFQLF 137 (600)
T ss_pred EEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88403022059988065220686499999999999999999989972699982369999999999999999972499999
Q ss_pred HHHHHCCCCCEEEEEECCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHC
Q ss_conf 2343103431235531234-332321000113554455677666554432100010034432101330378999985410
Q gi|254780866|r 139 IFFEASLIPMFVIIGVWGG-SERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFC 217 (499)
Q Consensus 139 v~~El~~l~~~~Li~~~~~-~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~ 217 (499)
++||.+++++|.||++|++ +++.+||.|+++++++|+..++.|+..++...|++|++++....+. ......+++++
T Consensus 138 igWEgvgl~SylLI~~~~~~~~a~~aa~~a~i~nriGd~~lll~i~~l~~~~gs~~~~~~~~~~~~---~~~~~~l~lil 214 (600)
T MTH00114 138 IGWEGVGIMSFLLIGWWFARSDANTSALQAIIYNRIGDIGLILTMAWLAMNLSTWNLQEMFTQTNT---TPLLPLLGLIL 214 (600)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCH---HHHHHHHHHHH
T ss_conf 999999999999999983888899999999999999899999999999998378439999873750---78999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEE
Q ss_conf 344455400023201010002222344333-3232233321110000111223310000000001222221221110000
Q gi|254780866|r 218 SFAIKIPMFPFHTWLPNAHVQAPTAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQ 296 (499)
Q Consensus 218 g~~~K~~~~PfH~WlP~~y~~ap~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q 296 (499)
|...|+||+|||.||||+ +||||||||++ |++++|+|+|.++|+. +++.. ++.....+.++|.+|+++|+..|+.|
T Consensus 215 aa~~KSAQfPfh~WLP~A-MeaPTPVSALlHsstmV~AGVylliR~~-pl~~~-~~~~~~~il~lG~lT~l~a~~~Al~Q 291 (600)
T MTH00114 215 AATGKSAQFGLHPWLPAA-MEGPTPVSALLHSSTMVVAGIFLLIRLH-PILQT-NNTALTICLCLGATTTLFAALCALTQ 291 (600)
T ss_pred HHHHHHHCCCCCHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999875007771413777-3689808999973054250166887642-17413-76899999999999999999999853
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH-CCCCCCHHHHHHHHHHCCCCC
Q ss_conf 2443223321001354023331048754221023455542102333035677776420-011110023556542023320
Q gi|254780866|r 297 TDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRL-HTRDIFAYGGLVHNMPRYAVV 375 (499)
Q Consensus 297 ~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~-g~~~l~~l~Gl~~~~P~~~~~ 375 (499)
+|+||++||||++|+|+|++++|.+.+ ..+++|+++|+++|+.+|+|+|.+.++. |++|+|++||+.|++|++..+
T Consensus 292 ~DiKkilAyST~SQLG~M~~~iGlg~~---~lA~fHl~~HA~FKalLFL~aG~iIh~~~~~qDir~mGgl~~~mP~T~~~ 368 (600)
T MTH00114 292 NDIKKIIAFSTSSQLGLMMVTIGLNQP---QLAFLHMSTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLHKTLPITSSC 368 (600)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHH
T ss_conf 527789887359887899999864649---99999999899999999996258986068852499748986665899999
Q ss_pred HHHHHHHHCCCHHHHHHCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 134555530102444311228999999986--599999999999999999999999997288987655568788912689
Q gi|254780866|r 376 MMVFTMANMGLPGTSGFIGEFLVIMSVFQN--SNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERC 453 (499)
Q Consensus 376 ~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~--~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 453 (499)
+.++.+|++|+||++||+||+.++|....+ +.+...+..+++.+++.|++|.+..+++|+++.+.....+|.++.+..
T Consensus 369 ~~igslsL~G~PflsGFySKD~Ile~~~~s~~n~~~~~l~~~~~~lTa~Ys~Rl~~~~~~~~~~~~~~~~~~e~~~~m~~ 448 (600)
T MTH00114 369 LTIGSLALMGMPFLSGFYSKDTIIETMNTSHLNAWALLLTLIATMLTAAYSLRIIFYTQTGHPRHKPTTLLNENNPTQIN 448 (600)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
T ss_conf 99999998467411146438999999984752899999999999999999999999997289988988888889888999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999772488
Q gi|254780866|r 454 MVYPIAVLTVFFGIYPVP 471 (499)
Q Consensus 454 ~~~~l~~~~i~lGi~p~~ 471 (499)
|+..++..++..|..-.+
T Consensus 449 pl~~L~~~si~~G~ll~~ 466 (600)
T MTH00114 449 PITRLALGSIIAGLLISL 466 (600)
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999
No 62
>MTH00127 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=556.30 Aligned_cols=399 Identities=33% Similarity=0.554 Sum_probs=363.4
Q ss_pred CEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC----CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCE
Q ss_conf 40546652258899999999999999975201121----00235678999863024302654043311123431034312
Q gi|254780866|r 74 FCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ----ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMF 149 (499)
Q Consensus 74 ~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~----~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~ 149 (499)
..++++++|++|.+++.++..+..+..++|+++.+ +|.+.|+.+++.....+.+.+.|.|++.+|++||.+.+|+|
T Consensus 52 ~~~~~lg~D~lS~~li~Lt~~l~~l~ilaS~~~~~~~~~~~~~~f~~l~l~l~~~li~~F~s~dl~lFYiffE~~LIP~~ 131 (459)
T MTH00127 52 SLNPYMATDPLSTPLLVLTCWLLPLMILASQNHTSPEPINRQRTYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTL 131 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76399837687999999999999999999558862162005889999999999999999999789999999999999999
Q ss_pred EEEEECCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH--HCCCHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 35531234-3323210001135544556776665544321000100344321--01330378999985410344455400
Q gi|254780866|r 150 VIIGVWGG-SERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAM--SKFPFSIQYWMWIAFFCSFAIKIPMF 226 (499)
Q Consensus 150 ~Li~~~~~-~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~--~~~~~~~~~~~~~ll~~g~~~K~~~~ 226 (499)
.+|..||+ +||.+|+.|+++++..||..++.++..+|..+|++++..+... ...+...+.+.+..+++||++|++++
T Consensus 132 ~LI~~WG~q~eR~~A~~~~l~YTl~gSl~lL~~i~~l~~~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~~laF~vK~Plf 211 (459)
T MTH00127 132 IIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQPLQLSSWGDKLWWAGCLLAFLVKMPLY 211 (459)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99998289488999999999999999999999999999855884099998743301204789999999999999965888
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCC
Q ss_conf 02320101000222234433332322333211100001112233100000000012222212211100002443223321
Q gi|254780866|r 227 PFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYS 306 (499)
Q Consensus 227 PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAyS 306 (499)
|+|.|+||+|.|||+++|++++|+..|+|.|+++|+..++.|.. ......++.+++.+++++++.|++|+|+||++|||
T Consensus 212 p~H~WLPkAHvEAP~~gSmiLAgvLlKlG~YGliR~~~~l~p~~-~~~~~~~i~l~l~g~i~~slicl~Q~DlK~liAYS 290 (459)
T MTH00127 212 GVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLT-KELAYPFIILALWGIIMTGSICLRQTDLKSLIAYS 290 (459)
T ss_pred CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 88665836435197499999999999888999999999885889-99999999999999999999999801768998886
Q ss_pred CCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCC
Q ss_conf 00135402333104875422102345554210233303567777642001111002355654202332013455553010
Q gi|254780866|r 307 SIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGL 386 (499)
Q Consensus 307 si~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~ 386 (499)
||+|||+++.|+..+++.|..|+++|+++|++.|+++|..+|.+++|+||||++++||+.+++|..+..+.++.++..|+
T Consensus 291 SVsHMG~v~~gi~~~~~~g~~Gal~~miaHGl~ss~LF~lag~~y~r~~tR~i~~~~Gl~~~~P~~~~~~~l~~lan~gl 370 (459)
T MTH00127 291 SVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLAL 370 (459)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 69999999999997667789999999999999999999999999995176158883997877589999999999987279
Q ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 24443112289999999865999999999999999999999999972889876555687889126899999999999997
Q gi|254780866|r 387 PGTSGFIGEFLVIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFG 466 (499)
Q Consensus 387 Pp~~GF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lG 466 (499)
||+.||+||++++.+.++..++..+++.++..+++.|.+|.+.++.+|+.+++ .+..+|.+.||...+....+..+.++
T Consensus 371 Pp~~nF~gE~~i~~~~~~~~~~~~~~~~~~~~lsa~YsL~l~~~~~~G~~~~~-~~~~~~~~~rE~~~l~~h~~pl~ll~ 449 (459)
T MTH00127 371 PPLPNLMGELMIITSLFNWSPWTLALTGAGTLITAGYSLYMFLMTQRGPLPAH-IIALEPSHTREHLLMALHLIPLLLLI 449 (459)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH-CCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 87464889999999999985999999999999999999999999664998040-23689972789999999999999999
Q ss_pred HHHHHHHH
Q ss_conf 72488999
Q gi|254780866|r 467 IYPVPIRD 474 (499)
Q Consensus 467 i~p~~~~~ 474 (499)
++|+.+..
T Consensus 450 l~p~li~~ 457 (459)
T MTH00127 450 LKPELIWG 457 (459)
T ss_pred HHHHHHHC
T ss_conf 91999940
No 63
>MTH00211 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=548.36 Aligned_cols=400 Identities=21% Similarity=0.350 Sum_probs=352.9
Q ss_pred EEEEECC---CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHHCCCEEEEECCCCCHHH
Q ss_conf 9863134---854054665225889999999999999997520112--10023567899986302430265404331112
Q gi|254780866|r 65 IEYYHWI---DYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSI--QENFREYMIAFLVLESMVIGAFLSLDMLLFYI 139 (499)
Q Consensus 65 ~~~~~~~---~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~--~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v 139 (499)
...++|. +..+++++.+|.+|..|..++..++..+..||..|+ |++.+||+.++.++..+|.+++.|+|++++++
T Consensus 55 ~~~~~w~~~~~~~i~~~~~~D~~S~~f~~~v~~is~~V~~yS~~YM~~d~~~~rF~~~l~lF~~sMl~Lv~s~Nl~~l~i 134 (595)
T MTH00211 55 LTGWEWLNLGGFSLNLSFRYDFYSIFFFVVALYVTWSILEFSLWYMSTDPNVNRFFKYLLLFLISMLILVSANNLFQLLI 134 (595)
T ss_pred EEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88615114488472765115830899999999999999999688737899957899999999999999999836999999
Q ss_pred HHHHCCCCCEEEEEECCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCC
Q ss_conf 3431034312355312343-323210001135544556776665544321000100344321013303789999854103
Q gi|254780866|r 140 FFEASLIPMFVIIGVWGGS-ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCS 218 (499)
Q Consensus 140 ~~El~~l~~~~Li~~~~~~-~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g 218 (499)
+||.+++++|.||++|+++ ++..++.|+++++++|+..++.|+..++...|++|++++.... .........++++|
T Consensus 135 gWEgvgl~SylLI~~~~~r~~a~~aa~~a~i~nriGd~~lll~i~~l~~~~~s~~~~~i~~~~---~~~~~~~~~~l~la 211 (595)
T MTH00211 135 GWEGVGIMSFLLISWWYGRSDANTAALQAIIYNRIGDIGLILSMFWLLMNLNSWTMQQLFILS---DMVNTLPLLGFLLA 211 (595)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC---CHHHHHHHHHHHHH
T ss_conf 999999999998923189589999999999999389999999999999992772499998636---43889999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEC
Q ss_conf 44455400023201010002222344333-32322333211100001112233100000000012222212211100002
Q gi|254780866|r 219 FAIKIPMFPFHTWLPNAHVQAPTAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQT 297 (499)
Q Consensus 219 ~~~K~~~~PfH~WlP~~y~~ap~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~ 297 (499)
...|+||+|||.||||+ +|||||+||++ |++++|+|+|.++|+. +++. .++.+...+.++|.+|+++|++.|+.|+
T Consensus 212 a~~KSAQfPlh~WLP~A-M~aPTPVSALlHsstmV~AGvylliR~~-~~~~-~~~~~~~~~l~lG~lT~l~a~~~Al~q~ 288 (595)
T MTH00211 212 AMGKSAQFGLHPWLPAA-MEGPTPVSALLHSSTMVVAGVFLLIRLS-PLIL-NNFLVLGAVLCLGALTTLFAALCALTQN 288 (595)
T ss_pred HHHHHCCCCCCHHHHHH-HCCCCCHHHHHHHHHHHHCCHHHEECCC-HHHH-HCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99874316572545876-0699928999987589980631001105-2744-1789999999999999999999998777
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH-CCCCCCHHHHHHHHHHCCCCCH
Q ss_conf 443223321001354023331048754221023455542102333035677776420-0111100235565420233201
Q gi|254780866|r 298 DIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRL-HTRDIFAYGGLVHNMPRYAVVM 376 (499)
Q Consensus 298 d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~-g~~~l~~l~Gl~~~~P~~~~~~ 376 (499)
|+||++||||++|+|+|+++++.+.+ ..+++|+++|+++|+.+|+|+|.+.+.. |++|+|++||+.+++|.+..++
T Consensus 289 DiKkilAyST~SQlG~M~~aiglg~~---~~a~fHl~~HA~fKalLFL~aG~iIh~~~~~qDir~mGgl~~~mP~t~~~~ 365 (595)
T MTH00211 289 DMKKIVAFSTTSQLGLMVVALGLGQP---QLAFLHICTHAFFKAMLFLCSGSIIHSLNNEQDIRKMGGLSKALPFTSSCL 365 (595)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHH
T ss_conf 78788874269888899999876589---999999997899999999831288774477137987079887638999999
Q ss_pred HHHHHHHCCCHHHHHHCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 345555301024443112289999999865--999999999999999999999999972889876555687889126899
Q gi|254780866|r 377 MVFTMANMGLPGTSGFIGEFLVIMSVFQNS--NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCM 454 (499)
Q Consensus 377 ~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 454 (499)
.++.+|++|+||++||+||+.|+|+...++ .|...+..+++.+++.|++|.+..++.++++.+...+..|.++.+..|
T Consensus 366 ~ig~lsL~G~P~lsGF~SKD~IlE~~~~s~~n~~~l~l~liat~lTa~YS~Rli~~v~~~~~~~~~~~~~~e~~~~~~~P 445 (595)
T MTH00211 366 IIGSLALMGFPFLAGFFSKDSILENMNMSNLNSWALLLTLLATSLTAAYSLRLIYLSLGGNPRMLPLSPINEENNSLKNP 445 (595)
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99999984676002251168999999866246999999999999999999999999994898899888888998899999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999977248899
Q gi|254780866|r 455 VYPIAVLTVFFGIYPVPIR 473 (499)
Q Consensus 455 ~~~l~~~~i~lGi~p~~~~ 473 (499)
+..++..++..|..-.+..
T Consensus 446 l~~La~~Si~~G~~~~~~~ 464 (595)
T MTH00211 446 LKRLAYGSIIGGVFFTLFL 464 (595)
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999888
No 64
>TIGR01770 NDH_I_N proton-translocating NADH-quinone oxidoreductase, chain N; InterPro: IPR010096 This entry describes the 14th (based on Escherichia coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This entry does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This entry also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone.; GO: 0008137 NADH dehydrogenase (ubiquinone) activity, 0042773 ATP synthesis coupled electron transport.
Probab=100.00 E-value=0 Score=548.61 Aligned_cols=394 Identities=22% Similarity=0.370 Sum_probs=346.7
Q ss_pred EEEEHHHHHHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEEC
Q ss_conf 65225889999999999999997520112---100235678999863024302654043311123431034312355312
Q gi|254780866|r 79 LGVDGISILLVVLTTFLTPFCILSSWKSI---QENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVW 155 (499)
Q Consensus 79 l~iD~ls~~f~~l~~~i~~l~~~ys~~~~---~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~ 155 (499)
+..|+++........+.+.....++.++. +.+..||+.++++...|+..+++|+|++.+|++.|++++|.|.|++..
T Consensus 71 f~~D~~~~~~k~~~ll~~~~~~~~~~~~~~~~~~~~~EF~~L~l~~~lG~~~~vS~~~Ll~~y~gLEl~SL~~Y~L~~~~ 150 (491)
T TIGR01770 71 FIVDNFALLIKLILLLSTLLLFLLALSYLSKEKINKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAALK 150 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 66746899999999999999999874467751132047899999999999999999999999999999999999998632
Q ss_pred C-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC---CCHH-------HHHHHHHHHHCCCCCCCC
Q ss_conf 3-4332321000113554455677666554432100010034432101---3303-------789999854103444554
Q gi|254780866|r 156 G-GSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSK---FPFS-------IQYWMWIAFFCSFAIKIP 224 (499)
Q Consensus 156 ~-~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~---~~~~-------~~~~~~~ll~~g~~~K~~ 224 (499)
+ ++++.|||.||++.|+++|.++++|+.++|+.|||+|++++....+ .+.+ .-....+++++|+++|.+
T Consensus 151 r~s~~S~EAglKYfiLGa~sS~llLfG~sliYg~tG~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~G~~f~~~gl~FKl~ 230 (491)
T TIGR01770 151 RKSEFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNLEKNISNILINSSLLLLGIVFILVGLLFKLS 230 (491)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHH
T ss_conf 11121235668999999999999999999999867677799999985211023430310488999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCC
Q ss_conf 00023201010002222344333323223332111000011122331000000000122222122111000024432233
Q gi|254780866|r 225 MFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIA 304 (499)
Q Consensus 225 ~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllA 304 (499)
.+|||+|.||+|++||+++++++|.+++-.+.+.++|+........+..|+.++.+++.+||++|++.|+.|+|+||+||
T Consensus 231 avPFH~W~PDVYeGaP~~vt~f~s~vpKIa~f~~~~rl~~~~~~~~~~~~~~~~~~~a~~Sm~~G~~~Al~Q~~~KRlLA 310 (491)
T TIGR01770 231 AVPFHMWVPDVYEGAPTSVTAFFSIVPKIAIFAVLLRLFLYILFEFSAVWQIFLLIIAVLSMLIGNFGALAQKKVKRLLA 310 (491)
T ss_pred HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 61333437864136549999999999999999999999988865334689999999999999999999973104037778
Q ss_pred CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH-------HHC---CCCCCHHHHHHHHHHCCCC
Q ss_conf 210013540233310487542210234555421023330356777764-------200---1111002355654202332
Q gi|254780866|r 305 YSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYD-------RLH---TRDIFAYGGLVHNMPRYAV 374 (499)
Q Consensus 305 ySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~-------~~g---~~~l~~l~Gl~~~~P~~~~ 374 (499)
||||+|+||+++|+..++.+|.++.++|++-|+++..+.|.+.-.+.+ +.+ .+.++|++|+.+++|..|.
T Consensus 311 YSSI~H~Gy~l~~~~~~~~~g~~a~l~Y~~~Y~~~~~g~F~~l~~L~~~rnv~~~~~~~ry~~~~~~~~gL~~~~p~~A~ 390 (491)
T TIGR01770 311 YSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFGVLLLLRSIRNVYKKKDEERYIEYISDLAGLAKTNPLLAI 390 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 86799999999999973031489999999999999999999999983144420127762133328999989988299999
Q ss_pred CHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCHH
Q ss_conf 0134555530102444311228999999986599-9999999999999999999999972889-8765556878891268
Q gi|254780866|r 375 VMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSNT-VAVLASFGVVLSALYSLWLYRKVVFGVS-KCEKVQQLKDLSLRER 452 (499)
Q Consensus 375 ~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~~-~~~~~~~~~~ls~~~~l~~~~~~~~g~~-~~~~~~~~~~~~~~~~ 452 (499)
.+.+..+|++|+||+.||+||..++.++.+++.+ +.+++++.+++++.||+|+.+.+|+.++ .+++.....+.+..+.
T Consensus 391 ~~~i~~FSlaGIPP~aGF~~K~~vf~~~~~~~~~~L~~~~v~~S~~~~fYYlR~~k~myf~~~~~~~~~~~~~~~~~~~~ 470 (491)
T TIGR01770 391 LILIILFSLAGIPPLAGFFGKFYVFFALLKSGLVLLAVIAVLISVISAFYYLRVVKVMYFDKPEVLERRIIIAPISKAQS 470 (491)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHH
T ss_conf 99999999630232689999999999999678155799999999999999999999998076421202321455542567
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999997724889
Q gi|254780866|r 453 CMVYPIAVLTVFFGIYPVPI 472 (499)
Q Consensus 453 ~~~~~l~~~~i~lGi~p~~~ 472 (499)
.++...+...+.+|++|+++
T Consensus 471 ~~l~~~~~~~~~~gl~P~~~ 490 (491)
T TIGR01770 471 LLLSITALFLVFLGLFPSLI 490 (491)
T ss_pred HHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999710114
No 65
>PRK06591 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=549.80 Aligned_cols=411 Identities=17% Similarity=0.259 Sum_probs=341.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEEHH
Q ss_conf 78999999999999998720355303579999999999999999999986308888189998631348540546652258
Q gi|254780866|r 5 FLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLGVDGI 84 (499)
Q Consensus 5 ~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iD~l 84 (499)
++.+++++|++++++..+..+. ++..+.++.......++.++..+...+++. ...+...|.++ .++.+++|.+
T Consensus 7 lpil~IliPl~~all~~l~~r~---~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~---~~~~~g~w~~~-~GI~~~~d~l 79 (433)
T PRK06591 7 FPIIQILFPLFGALLSIISFRF---IEFARIITRICILSSLLVSIYGYSIIQNTE---LSYTMGGWTSK-IGIEYRLNSL 79 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---EEEEEECCCCC-CCEEEEECCH
T ss_conf 8999999999999999998641---689999999999999999999999956884---49986055787-7738887603
Q ss_pred HHHHHHHHHHHHHHHHHHHCCC---------CCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEEC
Q ss_conf 8999999999999999752011---------2100235678999863024302654043311123431034312355312
Q gi|254780866|r 85 SILLVVLTTFLTPFCILSSWKS---------IQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVW 155 (499)
Q Consensus 85 s~~f~~l~~~i~~l~~~ys~~~---------~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~ 155 (499)
+..++.+++.++++...|+..+ .++|+++||.+++++..|++|++.|+|++++|++||++++++|.|+++|
T Consensus 80 ~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~fy~~~l~~~~g~~g~~~s~Dlf~lfVf~Ei~~i~sy~Li~~~ 159 (433)
T PRK06591 80 NQAIIVYLNLVLLFFLVFCHKITNQTILKYINNNRKSLFYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASG 159 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 38999999999999999999887466653025665374999999999999999999379999999999999999999809
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC--CHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 343323210001135544556776665544321000100344321013--303789999854103444554000232010
Q gi|254780866|r 156 GGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKF--PFSIQYWMWIAFFCSFAIKIPMFPFHTWLP 233 (499)
Q Consensus 156 ~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~--~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP 233 (499)
+++++.+|+.||++++.+|+.++|.|+.++|..+||+|+.|+.+..+. +.....+...++++|+++|+|++|||+|+|
T Consensus 160 ~~~~~~~aa~kY~i~~~~gs~~~L~gi~~ly~~tGtl~~~~i~~~~~~~~~~~~~~~~~~l~~ig~~~K~a~fPlH~WLP 239 (433)
T PRK06591 160 NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYLQEHTNSRIITIAIGFFLIGAILKTAFFPMHFWMM 239 (433)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 98899999999999999999999999999999976856999999876366752899999999999999972643616036
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC--CCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 1000222234433332322333211100001112233--10000000001222221221110000244322332100135
Q gi|254780866|r 234 NAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLA--SQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHM 311 (499)
Q Consensus 234 ~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~--~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~ 311 (499)
|+|+++|+++++++|++++|+|.|+++|+...+++.. ...+.+++.++|.+|+++|++.|++|+|+||++|||||+|+
T Consensus 240 day~~ap~~~s~lls~~~~k~g~y~l~R~~~~~~~~~~~~~~~~~~i~~l~~~t~i~g~~~Al~Q~diKrllAYSsIsq~ 319 (433)
T PRK06591 240 RAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYETIKTAITNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQI 319 (433)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 63478978999999999999999999999999746224689999999999999999999999987219999999999999
Q ss_pred CHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHH
Q ss_conf 40233310487542210234555421023330356777764200111100235565420233201345555301024443
Q gi|254780866|r 312 GYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSG 391 (499)
Q Consensus 312 G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~G 391 (499)
||++++.+ +..+..++..|+++|++.|..+|+..+ .+|..|++| .+..+.++.+|++|+||++|
T Consensus 320 Gyi~l~~~--~~~~~~~~~~~l~~~~~~k~~lfl~~~-------------~~~~~~~~~-~~~~f~i~~lsl~GiPp~~G 383 (433)
T PRK06591 320 GYVFLLYV--TENGIIILPSLLLADSINKIALFLIDA-------------YNESYKRSP-NKVLFIIAIICSCGLPISPL 383 (433)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHCCCCH-HHHHHHHHHHHHHCCHHHHH
T ss_conf 99999999--899999999999999999999999998-------------777604898-99999999999974014424
Q ss_pred HCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 1122899999998659999-9999999999999999999997288987
Q gi|254780866|r 392 FIGEFLVIMSVFQNSNTVA-VLASFGVVLSALYSLWLYRKVVFGVSKC 438 (499)
Q Consensus 392 F~~k~~i~~~~~~~~~~~~-~~~~~~~~ls~~~~l~~~~~~~~g~~~~ 438 (499)
|+|||.+++++++++.++. ++.++++++++.|++|+++.+|++++++
T Consensus 384 F~sK~~il~a~~~~~~~~~~~~~li~s~lt~~Y~~rii~~~f~~~~~~ 431 (433)
T PRK06591 384 FFIKVNILELLLQQNLLLDFIIILLSSVGSLFYHYKMVLLLFSTKQES 431 (433)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999999838199999999999999999999999998599866
No 66
>MTH00199 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=545.89 Aligned_cols=386 Identities=20% Similarity=0.327 Sum_probs=337.2
Q ss_pred EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 65225889999999999999997520112100235678999863024302654043311123431034312355312343
Q gi|254780866|r 79 LGVDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS 158 (499)
Q Consensus 79 l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~ 158 (499)
+..|+.+..+..+.......+.+. +.++++.||+.++++...|+++++.|+|++++|++||++++|+|.|+++++++
T Consensus 61 ~~~d~~~~~~k~~~~~~~~~~~~~---~~~~~~~e~~~l~L~~~~Gm~~~vss~dli~lfl~lEl~sl~~Y~L~~~~r~~ 137 (454)
T MTH00199 61 LLINGWVLISKLIIIIGSISILLM---GLKESLFSVPVLILIVALGSLLLVSSINWLSIYLALELQTLSLFILVALKRDS 137 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 347489999999999999999998---46656268999999999999999986269999999999999999999836898
Q ss_pred -CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -3232100011355445567766655443210001003443210133037899998541034445540002320101000
Q gi|254780866|r 159 -ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHV 237 (499)
Q Consensus 159 -~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~ 237 (499)
++.||+.||++++.++|.++++|+.++|+.+|++|++++...... .....++++|+++|++++|||.|+||+|+
T Consensus 138 ~~s~eAalKYfilg~~~s~~lL~Gi~liY~~tGs~~~~~i~~~~~~-----~~g~~li~~gl~fK~a~~PfH~W~PDvYe 212 (454)
T MTH00199 138 AYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGINSLLSG-----DVGKILITISLLFKLSAAPFHMWAPDVYE 212 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHCCCCCCHHHHHC
T ss_conf 5589999999999878899999999999999578049999998864-----57899999999999966323154157757
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHH
Q ss_conf 22223443333232233321110000111223310000000001222221221110000244322332100135402333
Q gi|254780866|r 238 QAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIG 317 (499)
Q Consensus 238 ~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~ 317 (499)
+||++++++++ +..|+|.|.+++...+ ..+.+.+++++|+++|++.|++|+|+||++|||||+|+||++++
T Consensus 213 gaPt~vta~la-~~~Kia~~~~l~~~~~--------~~~il~~~~~lSmi~G~l~Al~Q~diKRlLAYSSIsh~Gyil~g 283 (454)
T MTH00199 213 GAPTITTALLA-TVPKIGVFSILVQIGP--------VTNVVLWCAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFG 283 (454)
T ss_pred CCCHHHHHHHH-HHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99789999999-9999999999999888--------99999999999999999999821436799999999899999999
Q ss_pred HCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHH
Q ss_conf 10487542210234555421023330356777764200111100235565420233201345555301024443112289
Q gi|254780866|r 318 IFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFL 397 (499)
Q Consensus 318 l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~ 397 (499)
++.++..+.+++++|+++|++++.++|.+.....+ ++++++|++|+.|++|.++.++.++.+|++|+||++||++||+
T Consensus 284 l~~~~~~g~~~~l~y~~~y~~~~~~~F~~i~~~~~--~~~~i~~l~GL~~~~P~~a~~~~i~~lSlaGiPP~~GF~~K~~ 361 (454)
T MTH00199 284 VAIGSFESIQASLIYMIIYVIMSICSFSIILSLKL--RRGLIVELSGLSRKNPVMALTLALTFLSIAGIPPLAGFLSKWL 361 (454)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 99754578999999999999999999999999982--7526999874875489999999999999839741202999999
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-----CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999986599-99999999999999999999999728898765-----5568788912689999999999999772488
Q gi|254780866|r 398 VIMSVFQNSNT-VAVLASFGVVLSALYSLWLYRKVVFGVSKCEK-----VQQLKDLSLRERCMVYPIAVLTVFFGIYPVP 471 (499)
Q Consensus 398 i~~~~~~~~~~-~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~ 471 (499)
++.++.+++.+ +.+++++++++++.||+|+++.+|+++++++. .++.++.+..+...+...+..++++|++|++
T Consensus 362 i~~a~i~~g~~~laii~vl~Svis~~YYlRiik~myF~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~ilf~~i~P~~ 441 (454)
T MTH00199 362 ILLSGVSSGYYLICIVAVISSVIAGVYYVRVVQIIYFQADSPLLIWQKVLNREERLDLSKSILIGMTLFFILFLMISPNF 441 (454)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHH
T ss_conf 99999986959999999999999999999999999508996202310000001355467899999999999998808099
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780866|r 472 IRDTFSVPLSSI 483 (499)
Q Consensus 472 ~~~~~~~~~~~l 483 (499)
+++..++++.++
T Consensus 442 ll~~~~~~a~~L 453 (454)
T MTH00199 442 LLQITHDATIGL 453 (454)
T ss_pred HHHHHHHHHHHC
T ss_conf 999999997644
No 67
>MTH00205 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=552.63 Aligned_cols=399 Identities=30% Similarity=0.524 Sum_probs=365.3
Q ss_pred CCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEE
Q ss_conf 5405466522588999999999999999752011210--02356789998630243026540433111234310343123
Q gi|254780866|r 73 YFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQE--NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFV 150 (499)
Q Consensus 73 ~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~--~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~ 150 (499)
..+++.+++|++|..++.++..+..++..+++++.++ +.++|+.+++++..++.+.+.+.|++.+|++||.+.+|+|.
T Consensus 48 ~~is~~~~~D~lS~~li~Lt~~i~~l~~l~S~~~~~~~~~~~~f~~l~lll~~~li~~F~s~dll~FyiffE~~LIP~~l 127 (452)
T MTH00205 48 SSISSSFSVDSVSLPLIMLSFWISVLMILSSFFILKSSNNSSLFTVTVIMLCLILILSFSSDNLLLFYILFEASLIPTLI 127 (452)
T ss_pred CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 21348881017259999999999999999877998646205799999999999999999997899999999999999999
Q ss_pred EEEECC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC--CHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 553123-43323210001135544556776665544321000100344321013--303789999854103444554000
Q gi|254780866|r 151 IIGVWG-GSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKF--PFSIQYWMWIAFFCSFAIKIPMFP 227 (499)
Q Consensus 151 Li~~~~-~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~--~~~~~~~~~~ll~~g~~~K~~~~P 227 (499)
+|..|| ++||.+|+.|+++++..||..++.|+..+|..+|+.++.+....... +.......+..+++||++|.|++|
T Consensus 128 LI~~wG~~~er~~A~~~~~~yT~~gSl~lL~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~laF~vK~Plfp 207 (452)
T MTH00205 128 LIMVWGYQPERLQASMYMLLYTLFASLPLLIGIIFFSDLNFHSSMFFMMDMGIGWSSDLVLSLYWIFCMLAFLVKMPLYL 207 (452)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99870998789999999999999989999999999999929951999998876444168999999999999998601501
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCC
Q ss_conf 23201010002222344333323223332111000011122331000000000122222122111000024432233210
Q gi|254780866|r 228 FHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSS 307 (499)
Q Consensus 228 fH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySs 307 (499)
+|.|+||+|+|||+++|++++|+..|+|.|+++|+..++++. ...+...+..+|++++++|++.|++|+|+||++||||
T Consensus 208 ~H~WLP~Ah~eAP~~~S~ilagvllK~G~ygl~R~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~al~Q~D~K~liAYSS 286 (452)
T MTH00205 208 THLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVSMILYSV-NYKVSELFFSVSLLGGVMTSMICLRQSDLKSLIAYSS 286 (452)
T ss_pred CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 503073532539818999999999986188999998873045-8999999999999999999999999987889999943
Q ss_pred CCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCH
Q ss_conf 01354023331048754221023455542102333035677776420011110023556542023320134555530102
Q gi|254780866|r 308 IAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLP 387 (499)
Q Consensus 308 i~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~P 387 (499)
|+|||+++.|+..+++.|.+|+++|+++|++.|+++|+.+|.+|+|+||||++++||+.+++|..+..+.+..++..|.|
T Consensus 287 vshmG~v~~g~~~~~~~g~~ga~~~mi~Hgl~s~~LF~lag~~y~r~~tR~i~~~~Gl~~~~P~~~~~~~l~~~~n~g~P 366 (452)
T MTH00205 287 VGHMGLMVVGVVSMTSWGYNGAIIMMVAHGLCSSGMFCLANNWYERSNSRSMMMTKGMLNIFPSLVLFWFLLFSCNMSAP 366 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99981899999987299999999999999988899999751567444869988849838788999999999999987255
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 44431122899999998659999999999999999999999999728898765556878891268999999999999977
Q gi|254780866|r 388 GTSGFIGEFLVIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGI 467 (499)
Q Consensus 388 p~~GF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi 467 (499)
|+.||+||.+++.+.++..++..+.+.++..+++.|++|.+.++++|+..+ ..++.+|.+.||...+.........+++
T Consensus 367 p~~nF~gE~~i~~~~~~~~~~~~~~~~~~~~lsa~Ysl~l~~~~~~G~~~~-~~~~~~~~~~re~~~l~~h~~Pl~~l~l 445 (452)
T MTH00205 367 PSINLLSEIGLAMSLLSSSKVSGVPLALISFFVGVYSMYLYSQSSHGSVSS-QFSSFLEIKEVEYFVGALHWFPLFILIL 445 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH-HHHCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 126199999999999998799999999999999999999999975699835-3003899726799999999999999998
Q ss_pred HHHHHH
Q ss_conf 248899
Q gi|254780866|r 468 YPVPIR 473 (499)
Q Consensus 468 ~p~~~~ 473 (499)
+|+.+.
T Consensus 446 ~p~l~~ 451 (452)
T MTH00205 446 VPKIFI 451 (452)
T ss_pred HHHHHC
T ss_conf 488872
No 68
>MTH00137 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=534.09 Aligned_cols=398 Identities=21% Similarity=0.322 Sum_probs=347.8
Q ss_pred EEEEEECC---CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHH
Q ss_conf 99863134---8540546652258899999999999999975201121--002356789998630243026540433111
Q gi|254780866|r 64 MIEYYHWI---DYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFY 138 (499)
Q Consensus 64 ~~~~~~~~---~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~ 138 (499)
....++|+ +..+++++.+|.+|..|..++.+++..+..|+..|++ ++.+||+.+++++..+|.+++.|+|+++++
T Consensus 66 ~~~~~~w~~~~~~~i~~~f~~D~~S~~f~~vv~~Is~~I~~yS~~YM~~d~~~~RF~~~l~lF~~sMl~LV~s~Nl~~lf 145 (611)
T MTH00137 66 IITNWHWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLLFLIAMIILVTANNMFQLF 145 (611)
T ss_pred EEEEHHHHEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 25412453238815176632185389999999999999999978970799982279999999999999999974399999
Q ss_pred HHHHHCCCCCEEEEEECC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHC
Q ss_conf 234310343123553123-4332321000113554455677666554432100010034432101330378999985410
Q gi|254780866|r 139 IFFEASLIPMFVIIGVWG-GSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFC 217 (499)
Q Consensus 139 v~~El~~l~~~~Li~~~~-~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~ 217 (499)
++||.+++++|.||++|. ++++.+||.|+++++++|+..++.++..++...|++|++++....+.... ......+++
T Consensus 146 iGWEgvGl~SylLI~~w~~r~~a~~aa~~a~l~nRiGDiglll~i~~l~~~~gs~~~~~i~~~~~~~~~--~~~~~~l~l 223 (611)
T MTH00137 146 IGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWFAMNLNSWEIQQIFALSKDFDL--TLPLLGLIL 223 (611)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCH--HHHHHHHHH
T ss_conf 999999999999999953986789999999999934389999999999999777449999986121035--999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEE
Q ss_conf 3444554000232010100022223443333-232233321110000111223310000000001222221221110000
Q gi|254780866|r 218 SFAIKIPMFPFHTWLPNAHVQAPTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQ 296 (499)
Q Consensus 218 g~~~K~~~~PfH~WlP~~y~~ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q 296 (499)
|...|+||+|||.||||| +||||||||++| ++++++|+|.++|+. |++.. .+.....+..+|.+|+++++..|+.|
T Consensus 224 aa~~KSAQfPfh~WLP~A-MegPTPVSALlHSsTmV~AGVyLliR~~-pl~~~-~~~~l~~~l~lG~lT~l~aa~~Al~Q 300 (611)
T MTH00137 224 AATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAGIFLLIRLS-PLMEN-NQTALTTCLCLGALTTLFTATCALTQ 300 (611)
T ss_pred HHHHHHCCCCCCHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 997542317560523888-6589816799988899996189999985-78762-69999999999999999999999731
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH-HCCCCCCHHHHHHHHHHCCCCC
Q ss_conf 244322332100135402333104875422102345554210233303567777642-0011110023556542023320
Q gi|254780866|r 297 TDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDR-LHTRDIFAYGGLVHNMPRYAVV 375 (499)
Q Consensus 297 ~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~-~g~~~l~~l~Gl~~~~P~~~~~ 375 (499)
+|+||++||||++|+|+|+.++|.+.+ ..|++|+++|+++|+.+|+|+|.+.+. .+++|+|++||+.+++|.+..+
T Consensus 301 ~DiKkiiAyST~SQLGlM~~~iGlg~~---~lA~fHL~tHA~FKAlLFL~aG~iIH~~~~~QDir~mGgl~~~mP~t~~~ 377 (611)
T MTH00137 301 NDIKKIVAFSTSSQLGLMMVTIGLNQP---QLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHNLTPFTSSC 377 (611)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHH
T ss_conf 218789998788899999999874628---89999999999999999983069999637853199867974102899999
Q ss_pred HHHHHHHHCCCHHHHHHCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 1345555301024443112289999999865--99999999999999999999999997288987655568788912689
Q gi|254780866|r 376 MMVFTMANMGLPGTSGFIGEFLVIMSVFQNS--NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERC 453 (499)
Q Consensus 376 ~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 453 (499)
+.++.+|++|+||++||+||+.|+|+...++ .|...+..+++.+++.|++|.+..++.|+++.+......|.++.+..
T Consensus 378 ~~igsLaL~G~PflsGFySKD~IlE~~~~s~~n~~~~~l~~~at~lT~~Ys~Rl~~~~~~~~~~~~~~~~~~E~~~~m~~ 457 (611)
T MTH00137 378 LTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFLPLSPINENNPAVIN 457 (611)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
T ss_conf 99999998534231378758999999986670899999999999999999999999995589988787888889778999
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999997724
Q gi|254780866|r 454 MVYPIAVLTVFFGIYP 469 (499)
Q Consensus 454 ~~~~l~~~~i~lGi~p 469 (499)
|+..++..+|..|..=
T Consensus 458 pl~~La~gSI~~G~ll 473 (611)
T MTH00137 458 PIKRLAWGSIIAGLLI 473 (611)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999999
No 69
>COG1007 NuoN NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]
Probab=100.00 E-value=0 Score=531.05 Aligned_cols=403 Identities=21% Similarity=0.346 Sum_probs=355.7
Q ss_pred EEEEHHHHHHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEEC
Q ss_conf 65225889999999999999997520112---100235678999863024302654043311123431034312355312
Q gi|254780866|r 79 LGVDGISILLVVLTTFLTPFCILSSWKSI---QENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVW 155 (499)
Q Consensus 79 l~iD~ls~~f~~l~~~i~~l~~~ys~~~~---~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~ 155 (499)
+..|..+..+.............++.++. ++++.||+.++++...|++.+..|+|+..+|+++|+.++++|.|++++
T Consensus 64 ~~~d~~a~~~~~~~l~~s~~~l~~s~~~~~~~~~~~~Efy~L~l~a~lG~~~~~sa~~l~~lfiglEl~Sl~~Y~L~a~~ 143 (475)
T COG1007 64 FIVDALALLMKIVVLLASLAALILSLPYLERAGTFKGEFYALLLFATLGMIVMASANNLLLLFIGLELLSLALYVLAALR 143 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 87746899999999999999999857999966875258999999999999999984109999999999999999999841
Q ss_pred CCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHH--HHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 34332-32100011355445567766655443210001003443210133037--8999985410344455400023201
Q gi|254780866|r 156 GGSER-IYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSI--QYWMWIAFFCSFAIKIPMFPFHTWL 232 (499)
Q Consensus 156 ~~~~~-~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~--~~~~~~ll~~g~~~K~~~~PfH~Wl 232 (499)
+++++ .|++.||++.+.+++.++++|+.++|..+||+++.++.+..+..... .....++++.|+++|.+.+|||.|.
T Consensus 144 r~~~~s~EaalKYfvlGalsS~~~l~G~al~Y~~tGsl~l~~i~~~~~~~~~~~~l~~g~vfii~gl~FKlsavPFH~W~ 223 (475)
T COG1007 144 RDSKRSSEAALKYFVLGALSSAFLLYGIALVYGATGSLSLSGIAAYLNGGGEPLGLLLGLVFIIAGLGFKLSAVPFHMWT 223 (475)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 77641257778999889899999999999999617887617888651267642499999999999999997347620157
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
Q ss_conf 01000222234433332322333211100001112233100000000012222212211100002443223321001354
Q gi|254780866|r 233 PNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMG 312 (499)
Q Consensus 233 P~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G 312 (499)
||+|++||+|+++++|++.+.++...++|+....++...+.|..++.+++++||++||+.|+.|+|+||++|||||+|+|
T Consensus 224 PDVYeGApt~v~afls~a~Kia~f~vl~Ri~~~~~~~~~~~~~~i~~iiAv~SM~~GN~~Al~Q~nvKRlLAYSSIah~G 303 (475)
T COG1007 224 PDVYEGAPTPVTAFLSTAPKIAAFAVLLRIFVTAFGPDAPDWYLIFAIIAVASMLVGNFAALSQTNVKRLLAYSSIAHMG 303 (475)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_conf 40116999307899875278999999999999706764215999999999999999999999851599999984898899
Q ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC-CCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHH
Q ss_conf 0233310487542210234555421023330356777764200-111100235565420233201345555301024443
Q gi|254780866|r 313 YVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLH-TRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSG 391 (499)
Q Consensus 313 ~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g-~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~G 391 (499)
|+++++..++..|..+.++|.+.|.+++.+.|.+.....++.+ ..++++++|+.+++|+.+.++.+..+|++|+||+.|
T Consensus 304 y~L~gl~a~~~~g~~a~~~y~l~Y~~~~lgaf~~v~~~~~~~~~~~~~~~~~GL~~~~P~~A~~~~i~m~SLaGIPP~~G 383 (475)
T COG1007 304 YLLVGLAAVTVGGYAAVLFYLLAYAFMSLGAFGVVALLSSKEGGAESISDLAGLSKRHPLLAALLTILMLSLAGIPPLAG 383 (475)
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHH
T ss_conf 99999997030222369999999999998999999998667887532464405033686899999999999758984012
Q ss_pred HCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 112289999999865-9999999999999999999999999728898765556878891268999999999999977248
Q gi|254780866|r 392 FIGEFLVIMSVFQNS-NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPV 470 (499)
Q Consensus 392 F~~k~~i~~~~~~~~-~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~ 470 (499)
||+|+.++.++.+++ +|+.+++++++++++.||+|+.+.+++.+++++..+.. . ...++.......+.++.+|++|+
T Consensus 384 F~gK~~vf~~av~~~~~~Laii~vl~S~isa~YYlRvv~~m~~~~~~~~~~~~~-~-~~~~~~~~~~~~i~~~~lgi~~~ 461 (475)
T COG1007 384 FWGKFYVFLAAVQAGLWWLAVIAVLNSAISAYYYLRVVKAMYFEEPEGAFRDAP-Q-YTALKAVLLVAAILVLVLGILPQ 461 (475)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-C-CCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999738699999999997998999999999997078644455544-5-55037999999999999997039
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 8999999999999
Q gi|254780866|r 471 PIRDTFSVPLSSI 483 (499)
Q Consensus 471 ~~~~~~~~~~~~l 483 (499)
++++....+++.+
T Consensus 462 ~~~~~~~~a~~~~ 474 (475)
T COG1007 462 PVIDLAAQAAAVL 474 (475)
T ss_pred HHHHHHHHHHHHC
T ss_conf 8999999987742
No 70
>MTH00163 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=530.57 Aligned_cols=394 Identities=32% Similarity=0.542 Sum_probs=357.6
Q ss_pred EEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEE
Q ss_conf 0546652258899999999999999975201121--00235678999863024302654043311123431034312355
Q gi|254780866|r 75 CSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVII 152 (499)
Q Consensus 75 ~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li 152 (499)
.++.+.+|.+|..++.++..+..++.++++++.+ +++++|+.+..++..++.+.+.++|++++|++||.+++|+|.+|
T Consensus 48 ~s~~f~~D~lS~~li~Ls~~I~~l~~l~S~~~~~~~~~~~~f~~l~l~l~~~l~~~F~s~nl~~FyiffE~~lip~~~LI 127 (446)
T MTH00163 48 ISYFFGVDLLSFGLILLSLWICLLMILSSESVYKYNNYSNLFLFLVLLLLLFLFLTFSSMNLLLFYIFFESSLIPTLILI 127 (446)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 74998207868999999999999999996688742640689999999999999999999689999999999999999999
Q ss_pred EECC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 3123-433232100011355445567766655443210001003443210133037899998541034445540002320
Q gi|254780866|r 153 GVWG-GSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTW 231 (499)
Q Consensus 153 ~~~~-~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~W 231 (499)
..|| ++||.+|+.|+++++.+|+..++.++..+|..+|++++...... ...+...+..++.||++|.|++|+|.|
T Consensus 128 ~~wG~~~er~~A~~y~~~yt~~~Sl~lL~~i~~l~~~~gs~~~~~~~~~----~~~~~~~~~~~~laF~vK~p~fp~H~W 203 (446)
T MTH00163 128 LGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNSLGSLSFYLLNSF----GFNSFLLYLSMILAFLVKMPMFLVHLW 203 (446)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH----HHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 9838977889999999999999999999999999997272379999875----779999999999999996480446340
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 10100022223443333232233321110000111223310000000001222221221110000244322332100135
Q gi|254780866|r 232 LPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHM 311 (499)
Q Consensus 232 lP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~ 311 (499)
+||||.|||+++|+++||+..|+|.|+++|+. +.++.....+...+..+|+.++++|++.|++|+|+||++|||||+||
T Consensus 204 LP~AhveAP~~gSmiLAgvllKlG~YGliR~~-~~~~~~~~~~~~~l~~l~l~~~~~~sl~al~Q~DlK~LiAYSSVsHM 282 (446)
T MTH00163 204 LPKAHVEAPVSGSMILAGVLLKLGGYGLLRVM-PLFSSLGLKFSYIWISISLVGGVLVSLICLRQTDLKSLIAYSSVAHM 282 (446)
T ss_pred CCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 50655238814689999999988887789999-87000578999999999999999999999987637899999889999
Q ss_pred CHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHH
Q ss_conf 40233310487542210234555421023330356777764200111100235565420233201345555301024443
Q gi|254780866|r 312 GYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSG 391 (499)
Q Consensus 312 G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~G 391 (499)
|+++.|+..+++.|..|+++|+++|++.|+++|..+|.+++|+||||+.++||+.+++|..+..+.+.+++..|.||+.|
T Consensus 283 G~v~~gi~~~~~~g~~gal~~mi~Hgl~ss~LF~~~g~~y~~~~sR~i~~~~Gl~~~~P~l~~~~~l~~~~n~g~Pp~~~ 362 (446)
T MTH00163 283 GLVLGGLMTFSYWGLNGSLLMMIAHGLCSSGLFCLANIVYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLN 362 (446)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999825999999999999999999999999999999707622998499476628999999999999844787441
Q ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 11228999999986599999999999999999999999997288987655568788912689999999999999772488
Q gi|254780866|r 392 FIGEFLVIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVP 471 (499)
Q Consensus 392 F~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~ 471 (499)
|+||++++.+.++..++......++..+++.|+++.+.++.+|+..+ .....++.+.+|...+.........+-+.|+.
T Consensus 363 F~gE~~i~~s~~~~~~~~~~~~~~~~~ls~~Ysl~ly~~~~hG~~~~-~~~~~~~~~~~e~~~l~~H~~Pl~~l~~~~~~ 441 (446)
T MTH00163 363 LLGEISLLNSILSWSWLSMIMLMLLSFFSAAYSLYLYSYSQHGKYYS-GLYSCSSGKVREYLLLFLHWFPLNLLILKSDL 441 (446)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH-HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999699999999999999999999999965699756-32178987189999999999999999983999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780866|r 472 IRD 474 (499)
Q Consensus 472 ~~~ 474 (499)
...
T Consensus 442 ~~~ 444 (446)
T MTH00163 442 FML 444 (446)
T ss_pred HHH
T ss_conf 883
No 71
>MTH00208 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=520.28 Aligned_cols=421 Identities=20% Similarity=0.286 Sum_probs=362.2
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEEECCC---CCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHH
Q ss_conf 999999999986308888189998631348---540546652258899999999999999975201121--002356789
Q gi|254780866|r 43 INFIFSLFVWSVFDKGRSSFQMIEYYHWID---YFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIA 117 (499)
Q Consensus 43 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~l 117 (499)
..+..++.-...+.+.+.+......++|.+ ..+++++..|.+|..|..++..++..+..|+..|++ ++.+||+.+
T Consensus 66 ~~~~~sl~pl~~~~~~g~~~~~~~~~~W~~~~~f~i~~sf~~D~~S~~F~~vvl~Vs~sI~~fS~~YM~~Dp~~~rF~~~ 145 (631)
T MTH00208 66 SLAFLSLIPLFLYISLGCPEINITLSNWLSNNGFSFSLSFIFDFYFNLFFSVALIVTWSIIEFSHYYMSNDPNKNAFFRL 145 (631)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 99999999999998189852412075776238815063121694299999999999999999967870089992169999
Q ss_pred HHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 99863024302654043311123431034312355312343-32321000113554455677666554432100010034
Q gi|254780866|r 118 FLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS-ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIID 196 (499)
Q Consensus 118 lll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~-~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~ 196 (499)
++++..+|..++.|+|+++++++||..++++|.||++|.++ ++.+|+.|.++++++|+..++.++.......|++|+++
T Consensus 146 l~lF~~sM~~Lv~s~Nl~~lfiGWeGvGl~SflLI~~w~~r~~a~~aal~a~l~NRiGD~glll~~~~~~~~~~s~~~~~ 225 (631)
T MTH00208 146 LIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRSDANSSALQAVIYNRIGDIGLLLFFSLSLLNFNSWNLSE 225 (631)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99999999999997139999999999999998967664795899999999999998879999999999999958812999
Q ss_pred HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCC
Q ss_conf 4321013303789999854103444554000232010100022223443333-232233321110000111223310000
Q gi|254780866|r 197 LYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFA 275 (499)
Q Consensus 197 ~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~ 275 (499)
+....+...........++++|...|+||+|||.||||| +|+||||||++| +.++++|+|.++|+. |++. .++...
T Consensus 226 ~~~~~~~~~~~~~~~~~~l~laa~~KSAQfplh~WLP~A-MegPTPVSALlHssTmVtAGVyLliR~~-p~~~-~~~~~~ 302 (631)
T MTH00208 226 ILLINNNNSFLINLLLFGLLLAAAGKSAQFGLHPWLPAA-MEGPTPVSALLHSSTMVVAGVFLLIRTS-PLYS-NSPFFN 302 (631)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHCC-CHHH-HHHHHH
T ss_conf 998705530489999999999998652307574210566-4699818888856578762166642107-5143-009999
Q ss_pred CHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH-H
Q ss_conf 000001222221221110000244322332100135402333104875422102345554210233303567777642-0
Q gi|254780866|r 276 PVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDR-L 354 (499)
Q Consensus 276 ~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~-~ 354 (499)
..+..+|.+|+++++..|+.|+|+||++||||.||.|+|+.+++.+.+ ..+++|+.+|+++|+.+|+|+|.+.+. .
T Consensus 303 ~~~l~iG~~T~l~a~~~Al~q~DiKkIiA~ST~SQLG~M~~~iglg~~---~la~fHl~tHA~FKAlLFLcaGsiIH~~~ 379 (631)
T MTH00208 303 SWCLILGGITALFAASTAISQHDIKKIVAYSTTSQLGLMVVAIGLGQP---IIAFFHICTHAFFKAMLFLCSGSIIHSLN 379 (631)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999999999999999878878741103078999999971308---89999999999999999982338998268
Q ss_pred CCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 011110023556542023320134555530102444311228999999986--599999999999999999999999997
Q gi|254780866|r 355 HTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQN--SNTVAVLASFGVVLSALYSLWLYRKVV 432 (499)
Q Consensus 355 g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~--~~~~~~~~~~~~~ls~~~~l~~~~~~~ 432 (499)
+++|+|++||+.+++|.+..++.++.+|++|+||++||+||+.|+|....+ +.+...+..+++.+++.|++|.+..++
T Consensus 380 ~~QDiRkMGgl~~~~P~t~~~~~igslaL~G~PflsGFySKD~IiE~~~~s~~n~~~~~l~liat~lTa~YS~Rlif~~f 459 (631)
T MTH00208 380 DEQDIRKMGGLSFLLPVTSACIILGSLALSGTPFLAGFYSKDLILEAGLASLSNFLGIILAFLATLLTAVYSFRIIFFCF 459 (631)
T ss_pred CHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 74479986798642739999999999998286222115037999999997510799999999999999999999999874
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 2889876555687889126899999999999997724
Q gi|254780866|r 433 FGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYP 469 (499)
Q Consensus 433 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p 469 (499)
+|+++.++.....|.++.+..|+..++..++..|..-
T Consensus 460 ~g~~~~~~~~~i~E~~~~m~~Pl~~La~gSI~~G~l~ 496 (631)
T MTH00208 460 SLPPSFSPLSPISEENNNLTNALNRLALGTIISGWFF 496 (631)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4789887411177798989999999999999999999
No 72
>MTH00108 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=515.38 Aligned_cols=400 Identities=21% Similarity=0.353 Sum_probs=347.3
Q ss_pred EEEEECC---CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHH
Q ss_conf 9863134---8540546652258899999999999999975201121--0023567899986302430265404331112
Q gi|254780866|r 65 IEYYHWI---DYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYI 139 (499)
Q Consensus 65 ~~~~~~~---~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v 139 (499)
...++|+ +..+++++.+|.+|..|..++.+++..+..|+..|++ ++.+||+.+++++..+|.+++.|+|++++++
T Consensus 63 ~~~~~w~~~~~~~~~~sf~~D~~S~~f~~~vl~Is~~V~~yS~~YM~~d~~~~rF~~~l~lF~~sMl~LV~s~Nl~~lfi 142 (602)
T MTH00108 63 ISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFI 142 (602)
T ss_pred EEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 77546137777252888743743899999999999999999799807998936599999999999999999721999999
Q ss_pred HHHHCCCCCEEEEEECC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCC
Q ss_conf 34310343123553123-43323210001135544556776665544321000100344321013303789999854103
Q gi|254780866|r 140 FFEASLIPMFVIIGVWG-GSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCS 218 (499)
Q Consensus 140 ~~El~~l~~~~Li~~~~-~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g 218 (499)
+||.+++++|.||++|. ++++.+|+.|.++++++|+..++.++..++...|++|++++....... ......++++|
T Consensus 143 GWEgvGl~SylLI~~w~~r~~a~~aa~~a~l~nRiGD~~lll~i~~l~~~~~s~~~~~i~~~~~~~---~~~~l~~llla 219 (602)
T MTH00108 143 GWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNN---LNLPLMGLLLA 219 (602)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCH---HHHHHHHHHHH
T ss_conf 999999999999999639867899999999999156899999999999981662299999735523---79999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEC
Q ss_conf 444554000232010100022223443333-2322333211100001112233100000000012222212211100002
Q gi|254780866|r 219 FAIKIPMFPFHTWLPNAHVQAPTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQT 297 (499)
Q Consensus 219 ~~~K~~~~PfH~WlP~~y~~ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~ 297 (499)
...|+||+|||.||||+ +||||||||++| ++++++|+|.++|+. +++. ..+.+...+..+|.+|+++++..|+.|+
T Consensus 220 a~~KSAQfPfh~WLP~A-MegPTPVSALlHSsTmV~AGVyLliR~~-pl~~-~~~~~~~~~l~lG~~T~l~aa~~Al~q~ 296 (602)
T MTH00108 220 ATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAGVFLLIRFH-PLME-NNKTIQTLTLCLGAITTLFTAICALTQN 296 (602)
T ss_pred HHHHHHHCCCHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99865207453420676-3589909999987689986099999998-8874-1799999999999999999999998523
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC-CCCCCHHHHHHHHHHCCCCCH
Q ss_conf 4432233210013540233310487542210234555421023330356777764200-111100235565420233201
Q gi|254780866|r 298 DIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLH-TRDIFAYGGLVHNMPRYAVVM 376 (499)
Q Consensus 298 d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g-~~~l~~l~Gl~~~~P~~~~~~ 376 (499)
|+||++||||+||+|+|+.+++.|.+ ..+++|+++|+++|+.+|+|+|.+.+..+ ++|+|++||+.+.+|.+..++
T Consensus 297 DiKkiiAyST~SQLGlMm~~iglg~~---~lA~fHL~tHA~FKAlLFL~aG~iIH~~~~~QDir~mGgl~~~~P~t~~~~ 373 (602)
T MTH00108 297 DIKKIVAFSTSSQLGLMMVTIGINQP---HLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTAL 373 (602)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHH
T ss_conf 18789999889899999999855738---899999999999999999823099982588541898759752047999999
Q ss_pred HHHHHHHCCCHHHHHHCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 34555530102444311228999999986--5999999999999999999999999972889876555687889126899
Q gi|254780866|r 377 MVFTMANMGLPGTSGFIGEFLVIMSVFQN--SNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCM 454 (499)
Q Consensus 377 ~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~--~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 454 (499)
.++.+|++|+||++||+||+.|+|....+ +.|......+++.+++.|++|....++.++++.+......|.++.+..|
T Consensus 374 ~i~slaL~G~PflsGFySKD~IlE~~~~s~~n~~~~~l~~~~~~lT~~YS~Rl~~~~~~~~~~~~~~~~~~e~~~~~~~p 453 (602)
T MTH00108 374 IIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINP 453 (602)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99999984763210787689999999865628999999999999999999999999970899888878767796789999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999977248899
Q gi|254780866|r 455 VYPIAVLTVFFGIYPVPIR 473 (499)
Q Consensus 455 ~~~l~~~~i~lGi~p~~~~ 473 (499)
+..++..+|..|..-.+.+
T Consensus 454 l~~L~~gsI~~G~l~s~~i 472 (602)
T MTH00108 454 IKRLLLGSIFAGFLISNNI 472 (602)
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999987
No 73
>MTH00165 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=510.25 Aligned_cols=407 Identities=22% Similarity=0.300 Sum_probs=349.0
Q ss_pred CCCCCEEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 088881899986313485405466522588999999999999999752011210--023567899986302430265404
Q gi|254780866|r 56 DKGRSSFQMIEYYHWIDYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQE--NFREYMIAFLVLESMVIGAFLSLD 133 (499)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~--~~~~f~~llll~~~~~~~~~~s~d 133 (499)
..+.......+.....+...++.+.+|.+|..|..++..++..+..|+.+|+++ +.+||+.++.++..+|.+++.|+|
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~S~~f~~~v~~Is~~V~~yS~~YM~~d~~~~rF~~~l~lFv~sM~~lv~s~n 104 (571)
T MTH00165 25 LNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPN 104 (571)
T ss_pred HCCCEEEEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 75815689644201267063887734852899999999999999999889837999842899999999999999999804
Q ss_pred CCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH
Q ss_conf 33111234310343123553123433232100011355445567766655443210001003443210133037899998
Q gi|254780866|r 134 MLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWI 213 (499)
Q Consensus 134 l~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ 213 (499)
+++++++||..++++|.||.+++++++.+|+.++++.+++|+..++.++.... +.|++|+.......... ........
T Consensus 105 l~~l~lgWEglGl~SylLI~fy~~~~s~~a~~~t~l~nRiGD~~ll~~i~~~~-~~gs~~~~~~~~~~~~~-~~~~~~~~ 182 (571)
T MTH00165 105 LISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVAILLSIAWML-NFGSWNFIFYLDSMSNS-FEMLLIGF 182 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHCCC-HHHHHHHH
T ss_conf 99999999999999999981368868999999999999876999999999999-95772699998763033-08999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
Q ss_conf 5410344455400023201010002222344333-323223332111000011122331000000000122222122111
Q gi|254780866|r 214 AFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLV 292 (499)
Q Consensus 214 ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~ 292 (499)
++++|...|+||+|||.|||||+ ||||||||++ |++++++|+|.++|+. +.+.. ..+...+..+|.+|+++|++.
T Consensus 183 ll~laa~~KSAQ~Pfh~WLP~AM-~aPTPVSALvHssTlVtAGvylliR~~-~~~~~--~~~~~~l~~ig~~T~l~a~~~ 258 (571)
T MTH00165 183 LIILAAMTKSAQIPFSAWLPAAM-AAPTPVSALVHSSTLVTAGVYLLIRFN-PLLSG--SFFSKLLLLISSLTMFMAGLG 258 (571)
T ss_pred HHHHHHHHHHCCCCCCHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHCC--HHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999988732177622116764-589728999987689988899999988-98521--689999999999999999999
Q ss_pred CCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH-HCCCCCCHHHHHHHHHHC
Q ss_conf 0000244322332100135402333104875422102345554210233303567777642-001111002355654202
Q gi|254780866|r 293 SMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDR-LHTRDIFAYGGLVHNMPR 371 (499)
Q Consensus 293 al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~-~g~~~l~~l~Gl~~~~P~ 371 (499)
|+.|+|+||++||||++|+|+++.+++.+.+ ..+++|+++|++.|+.+|+|+|.+.+. .|++|+|++||+.+++|.
T Consensus 259 Al~q~DiKkiiAyST~SQlG~M~~~~glg~~---~la~fHl~~HA~fKAlLFl~aG~vIh~~~~~qDir~mggl~~~~P~ 335 (571)
T MTH00165 259 ANFEFDLKKIIALSTLSQLGLMMSILSLGFY---KLAFFHLLTHALFKALLFMCAGVIIHSMGGSQDIRFMGGLSKSMPL 335 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHH
T ss_conf 9976407789898789899999999980559---9999999999999999998332999972797308886696542469
Q ss_pred CCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 3320134555530102444311228999999986--59999999999999999999999999728898765556878891
Q gi|254780866|r 372 YAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQN--SNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSL 449 (499)
Q Consensus 372 ~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~--~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~ 449 (499)
+..++.++.+|++|+||++||+||+.++|..... +.....+..+++.+++.|+.|....+++++++.+.....+|.+.
T Consensus 336 t~~~~~i~~lsL~G~PflsGFySKD~IlE~~~~~~~~~~~~~~~~~~~~lT~~YS~Rl~~~~~~~~~~~~~~~~~~~~~~ 415 (571)
T MTH00165 336 TSSCFNVSNLALCGFPFLAGFYSKDLILEMVFMSNLNMFSFLLFIFSTGLTVSYSFRLMYYSMTGDFNLSSLNNLSDESY 415 (571)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
T ss_conf 99999999999853505418988899999998744559999999999997899999999999818998987861888989
Q ss_pred CHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2689999999999999772488
Q gi|254780866|r 450 RERCMVYPIAVLTVFFGIYPVP 471 (499)
Q Consensus 450 ~~~~~~~~l~~~~i~lGi~p~~ 471 (499)
.+..|+..++..++..|-+-++
T Consensus 416 ~m~~pl~~L~~~si~~G~~~~~ 437 (571)
T MTH00165 416 IMLKSMILLLFMSIFGGSFLSW 437 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8999999999999999999999
No 74
>MTH00151 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=499.51 Aligned_cols=406 Identities=22% Similarity=0.318 Sum_probs=345.5
Q ss_pred CCCCCEEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 088881899986313485405466522588999999999999999752011210--023567899986302430265404
Q gi|254780866|r 56 DKGRSSFQMIEYYHWIDYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQE--NFREYMIAFLVLESMVIGAFLSLD 133 (499)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~--~~~~f~~llll~~~~~~~~~~s~d 133 (499)
..+......++.....+..+++.+.+|.+|..|..++..++..+..|+..|+++ +.+||+.++.++..+|.+++.|+|
T Consensus 29 ~~~~~~~~ew~~~~~~~~~~~~~~~~D~~S~~F~~~V~~Is~~V~~yS~~YM~~d~~~~rF~~~~~lFv~sM~~lv~s~N 108 (566)
T MTH00151 29 LNNISYIFEWELLSVSSCSFSFDLVLDWVSLSFSGVVCLISGCVFLFSDSYMKEDPFLKRFMWLVMLFVLSMNLLIFIPS 108 (566)
T ss_pred HCCEEEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 38948999766235288473875206831899999999999999999889706899802799999999999999999837
Q ss_pred CCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH
Q ss_conf 33111234310343123553123433232100011355445567766655443210001003443210133037899998
Q gi|254780866|r 134 MLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWI 213 (499)
Q Consensus 134 l~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ 213 (499)
++.++++||..++++|.||.+|+++++.+|+.|+++.+++|+.+++.++... ...|+++...... .........
T Consensus 109 li~l~lgWEglGl~SylLI~~y~~~~s~~ag~~t~l~nRvGD~~ll~~i~~~-~~~g~~~~~~~~~-----~~~~~~~~~ 182 (566)
T MTH00151 109 LFSLLLGWDGLGIVSFLLVIYYQNKKSLSAGMLTVLTNRIGDVFILISISLF-VLLGHWSILCMWD-----FELFGLLGL 182 (566)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-----HHHHHHHHH
T ss_conf 9999999999999999998770982899999999999988899999999999-9996699998865-----578999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
Q ss_conf 5410344455400023201010002222344333-323223332111000011122331000000000122222122111
Q gi|254780866|r 214 AFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLV 292 (499)
Q Consensus 214 ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~ 292 (499)
++.+|...|+||+|||.|||||+ +|||||||++ |++++++|+|.++|+. +.+. ..+.....+.++|.+|++++++.
T Consensus 183 ~l~~a~~tKSAQ~Pf~~WLP~AM-aaPTPVSALvHSsTmVtAGvylliR~~-~~~~-~~~~~~~~ll~ig~~T~l~a~~~ 259 (566)
T MTH00151 183 FLVLAGMTKSAQIPFSSWLPAAM-AAPTPVSALVHSSTLVTAGVFLIIRFF-YYLS-SSPGFSSFLLFISLLTLLMAGVS 259 (566)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHH-CCCCCHHHHHHCCHHHHHHHHHHHHHH-HHHH-HCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998750077723026762-699946777601134353488999862-7875-06999999999999999999999
Q ss_pred CCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH-HHCCCCCCHHHHHHHHHHC
Q ss_conf 000024432233210013540233310487542210234555421023330356777764-2001111002355654202
Q gi|254780866|r 293 SMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYD-RLHTRDIFAYGGLVHNMPR 371 (499)
Q Consensus 293 al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~-~~g~~~l~~l~Gl~~~~P~ 371 (499)
|+.|+|+||++||||++|+|+++.+++.+. ...|++|+++|++.|+.+|+|+|.+.+ ..|+||+|++||+.+++|.
T Consensus 260 A~~q~DiKkiiA~STlSQLG~M~~~lglg~---~~la~fHL~~HA~FKalLFl~aG~vIh~~~~~QDir~mggl~~~~P~ 336 (566)
T MTH00151 260 AVYEYDLKKIIALSTLSQLGVMMFSLGLGM---PMLALFHLYTHALFKALLFLCAGNIIHCYSGKQDIRQLGSLFSLLPV 336 (566)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHH
T ss_conf 996541766877727988899999986520---88999999875899999999768999715633159985798654399
Q ss_pred CCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 33201345555301024443112289999999865--9999999999999999999999999728898765556878891
Q gi|254780866|r 372 YAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNS--NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSL 449 (499)
Q Consensus 372 ~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~ 449 (499)
+..++.++.+|++|+||++||+||+.++|....++ .+...+..+++.+++.|+.|....+++++++.+......|.+.
T Consensus 337 t~~~~~i~~lsL~G~PflsGFySKD~Ile~~~~~~~n~~~~~~~~~s~~lT~~Ys~Rl~~~~~~~~~~~~~~~~~~e~~~ 416 (566)
T MTH00151 337 TSWFLNVSNMSLCGAPFLSGFYSKDLILESMLFSNMNLLMVLLGLVGVCLTALYSARLSFFVLWGSPTSNSYSNSSDEDL 416 (566)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
T ss_conf 99999999999873526509988899999999740589999999999999999999999999808998887767766877
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 268999999999999977248899
Q gi|254780866|r 450 RERCMVYPIAVLTVFFGIYPVPIR 473 (499)
Q Consensus 450 ~~~~~~~~l~~~~i~lGi~p~~~~ 473 (499)
.+..|+..+...++..|-+-.+..
T Consensus 417 ~m~~p~~~L~~~si~~G~~~~~~~ 440 (566)
T MTH00151 417 YVSFPMLLLSIGAIVGGFFLQSLF 440 (566)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 789999999999999999999987
No 75
>MTH00209 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=501.01 Aligned_cols=398 Identities=19% Similarity=0.272 Sum_probs=341.8
Q ss_pred EEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH
Q ss_conf 998631348540546652258899999999999999975201121--002356789998630243026540433111234
Q gi|254780866|r 64 MIEYYHWIDYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFF 141 (499)
Q Consensus 64 ~~~~~~~~~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~ 141 (499)
.+++....+...++.+.+|.+|..|..++..++..+..|+..|++ ++.+||+.++.++..+|.+++.|+|+++++++|
T Consensus 34 ~w~~~~~~~~~~~~~~~~D~~S~~f~~~v~~Is~~V~~yS~~YM~~d~~~~rF~~~l~lFv~sMl~Lv~s~Nl~~l~lGW 113 (565)
T MTH00209 34 EWELLELNSMSISFPLIIDWMSLSFSSVVLFISGSVMWFSNFYMAGEKFPNRFCLITLLFVLSMNFLIFVPNLISLLLGW 113 (565)
T ss_pred EEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 86645667827387520584289999999999999999989970599981259999999999999999981599999999
Q ss_pred HHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCC
Q ss_conf 31034312355312343323210001135544556776665544321000100344321013303789999854103444
Q gi|254780866|r 142 EASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAI 221 (499)
Q Consensus 142 El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~ 221 (499)
|..++++|.||.+|+++++.+|+.|+++.+++|+..++.++.... ..|+++..+... ..........++++|...
T Consensus 114 eglGl~SylLI~~y~~~~s~~a~~~t~l~nRiGD~~lll~i~~~~-~~~~~~~~~~~~----~~~~~~~i~lll~laa~~ 188 (565)
T MTH00209 114 DGLGLVSFCLVIYYQNSKSLSAGMITILSNRVGDACLILSIAGML-CFGNWNIFTLNY----QKGIGIVLSVLMVVAAMT 188 (565)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_conf 999999999975409769999999999999999999999999999-976399999988----522899999999999987
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCC
Q ss_conf 554000232010100022223443333-2322333211100001112233100000000012222212211100002443
Q gi|254780866|r 222 KIPMFPFHTWLPNAHVQAPTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIK 300 (499)
Q Consensus 222 K~~~~PfH~WlP~~y~~ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~K 300 (499)
|+||+|||.||||| +|||||+||++| ++++++|+|.++|+.. .+. ..+.....+..+|.+|++++++.|+.|+|+|
T Consensus 189 KSAQ~Pfh~WLP~A-MaaPTPVSALvHssTlVtAGVylliR~~~-~~~-~~~~~~~~ll~ig~~T~~~a~~~Al~q~DlK 265 (565)
T MTH00209 189 KSAQIPFSAWLPAA-MAAPTPVSALVHSSTLVTAGVYLMIRFSD-QFF-SSPFVGWYVLLIGSLTTLMASMVANFESDLK 265 (565)
T ss_pred HHCCCCCCHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 62207673112787-46998099999987999976776645038-877-4599999999999999999999998444052
Q ss_pred CCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH-HCCCCCCHHHHHHHHHHCCCCCHHHH
Q ss_conf 22332100135402333104875422102345554210233303567777642-00111100235565420233201345
Q gi|254780866|r 301 KLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDR-LHTRDIFAYGGLVHNMPRYAVVMMVF 379 (499)
Q Consensus 301 rllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~-~g~~~l~~l~Gl~~~~P~~~~~~~i~ 379 (499)
|++||||++|+|+++.+++.+.+ ..+++|+++|++.|+.+|+|+|.+.+. .|++|+|++||+.+++|.+..++.++
T Consensus 266 kiiA~STlSQLG~M~~~iglg~~---~~a~fHL~~HA~fKalLFl~aG~vIh~~~~~QDir~mggl~~~~P~t~~~~~i~ 342 (565)
T MTH00209 266 KVIALSTLSQLGLMMCSISLGGP---ELCLFHLVTHALFKALLFICAGNMIHSHGHSQDIRSVGMLWYQMPITSICLNIS 342 (565)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHH---HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHH
T ss_conf 57662489899999999976719---999999998899999999704078860588641887559975229999999999
Q ss_pred HHHHCCCHHHHHHCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 555301024443112289999999865--999999999999999999999999972889876555687889126899999
Q gi|254780866|r 380 TMANMGLPGTSGFIGEFLVIMSVFQNS--NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYP 457 (499)
Q Consensus 380 ~lsl~G~Pp~~GF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 457 (499)
.+|++|+||++||+||+.|+|....++ .....+..+++.+++.|+.|....++.++++.+..+...|.+..+..|+..
T Consensus 343 ~lsL~G~PflsGFySKd~Ile~~~~~~~~~~~~~~~~~~~~~T~~Ys~Rl~~~~~~~~~~~~~~~~~~e~~~~m~~p~~~ 422 (565)
T MTH00209 343 NLALCGIPFLAGFYSKDLILESMLESKINFMTLIMFFIATALTVSYSLRMSYFSLWGSNSSKSLSSLLEENKDMLKPMLV 422 (565)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99985661640899999999999877627999999999999999999999999981899998723064477358999999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999997724889
Q gi|254780866|r 458 IAVLTVFFGIYPVPI 472 (499)
Q Consensus 458 l~~~~i~lGi~p~~~ 472 (499)
++..++..|-.-.+.
T Consensus 423 L~~~Si~~G~~~~~~ 437 (565)
T MTH00209 423 LTLGSIVGGSVLSWV 437 (565)
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999998
No 76
>MTH00196 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=508.32 Aligned_cols=352 Identities=21% Similarity=0.334 Sum_probs=309.3
Q ss_pred HHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 63024302654043311123431034312355312343-32321000113554455677666554432100010034432
Q gi|254780866|r 121 LESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS-ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYA 199 (499)
Q Consensus 121 ~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~-~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~ 199 (499)
...|+++++.|+|++++|++||++++|+|.|+++++++ ++.||+.||++++.+|+.++++|+.++|..+|++|++++..
T Consensus 2 ~~lG~l~lv~s~dl~~~~v~~El~~l~~y~Li~~~~~~~~~~eAa~KYfi~~~~~s~~lL~gi~lly~~tGs~~~~~l~~ 81 (365)
T MTH00196 2 VALGSLCLISSSNWLSVYLAIELSTLCLFILVAQKGGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGLTGGTHISYIEL 81 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 79999999999899999999999999999998548999899999999999999999999999999999982946999999
Q ss_pred HHCC----CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC
Q ss_conf 1013----303789999854103444554000232010100022223443333232233321110000111223310000
Q gi|254780866|r 200 MSKF----PFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFA 275 (499)
Q Consensus 200 ~~~~----~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~ 275 (499)
..+. +.........++..|+++|+|++|||+|+||+|+++|++++++++ ++.|+|.|.+++...+ ..
T Consensus 82 ~~~~~~~~~~~~~~~~~~li~~~l~~K~~~~PfH~WlPda~~~ap~~~salla-~~~K~~~~~il~~~~~--------~~ 152 (365)
T MTH00196 82 LLNSGQSFSEVRVPIGYLLITVALLFKLSVAPFHMWAPDVYEGAPTTTTALLA-IVPKVGVFSILVSIGL--------PV 152 (365)
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHHHHHHHHHHHHH--------HH
T ss_conf 97355444047899999999999999845265556777646799879999999-9999999999999857--------89
Q ss_pred CHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC
Q ss_conf 00000122222122111000024432233210013540233310487542210234555421023330356777764200
Q gi|254780866|r 276 PVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLH 355 (499)
Q Consensus 276 ~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g 355 (499)
..+.+.+++|+++|++.|++|+|+||++|||||+|+||++++++.++..+.+++++|+++|++.|..+|.+.+.. +++
T Consensus 153 ~~~~~~~~~s~i~G~~~al~Q~dlKrllAYSSIsh~G~i~l~i~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~--~~~ 230 (365)
T MTH00196 153 NILLVGALFSLFVGALGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESLQASLVYLFLYIIMSICVFSIILAL--GVY 230 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCC
T ss_conf 999999999999999999864355745766888799999999998317899999999999999999999999999--814
Q ss_pred CCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 11110023556542023320134555530102444311228999999986599-99999999999999999999999728
Q gi|254780866|r 356 TRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSNT-VAVLASFGVVLSALYSLWLYRKVVFG 434 (499)
Q Consensus 356 ~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~~-~~~~~~~~~~ls~~~~l~~~~~~~~g 434 (499)
+++++|++|+.|++|.++.++.++.+|++|+||++||++||+++++..+++.+ +..++.+++++++.|++|.++++|++
T Consensus 231 ~~~i~~~~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~~K~~il~~~~~~~~~~~~~~~~~~s~ls~~Yylrl~~~~~f~ 310 (365)
T MTH00196 231 KNLLVEFSGLSRRLPFLALTLALTFLSIAGIPPLVGFLGKWLVLLSGVVSQYYLIFLLAVVCSVIAGVYYVRIVKIIFFQ 310 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 78999997178873999999999999986535344589999999999986879999999999999999999999999908
Q ss_pred CCCCCC-----CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 898765-----5568788912689999999999999772488999999999999
Q gi|254780866|r 435 VSKCEK-----VQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRDTFSVPLSSI 483 (499)
Q Consensus 435 ~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~~~~~~~~~l 483 (499)
+++.+. .++.+|.+.+|...+......+..+|++|+++.+....++.++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~i~~~~i~P~~ll~~~~~~~~~l 364 (365)
T MTH00196 311 ANSFLLISTKALKKENKINLRKALLIGASLYLIGFTILSPNLLFQLAHWAIGGL 364 (365)
T ss_pred CCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC
T ss_conf 997543332654013677588999999999999999858799999999998751
No 77
>MTH00207 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=497.08 Aligned_cols=404 Identities=19% Similarity=0.332 Sum_probs=345.1
Q ss_pred CCCCEEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 88881899986313485405466522588999999999999999752011210--0235678999863024302654043
Q gi|254780866|r 57 KGRSSFQMIEYYHWIDYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQE--NFREYMIAFLVLESMVIGAFLSLDM 134 (499)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~--~~~~f~~llll~~~~~~~~~~s~dl 134 (499)
.+......++.....+...++.+.+|.+|..|..++..++..+..|+.+|+++ +.+||+.++.++..+|.+++.|+|+
T Consensus 31 ~~~~~~~ew~~~~~~~~~~~~~~~~D~~S~~F~~~v~~Is~~V~~YS~~YM~~d~~~~RF~~~l~lFv~sM~~Lv~s~Nl 110 (572)
T MTH00207 31 CNKTILIEWELFTISSSPINFPIIFDPTGTLFSSTVLFISANVLKFATIYMKDDKFLNRFISLVLLFVLSMNMLIFFPHL 110 (572)
T ss_pred CCEEEEEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89377885310121783639751078338999999999999999998887358989135999999999999999998009
Q ss_pred CCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 31112343103431235531234332321000113554455677666554432100010034432101330378999985
Q gi|254780866|r 135 LLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIA 214 (499)
Q Consensus 135 ~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~l 214 (499)
++++++||..++++|.||.+|+++++.+|+.|.++.+++|+..++.++.... ..++++..+.. ..........+
T Consensus 111 ~~l~lgWeglGl~SylLI~~y~~~~s~~a~~~t~l~nRiGD~~ll~~i~~~~-~~~~~~~~~~~-----~~~~~~~~~~~ 184 (572)
T MTH00207 111 MTLLLGWDGLGLVSFILVIYYQNPKSLAAGMITALTNRIGDVMLLLSIGWTL-NQGHWSITNMW-----ATDMSNLIILA 184 (572)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-----HHHHHHHHHHH
T ss_conf 9999999999999999982569889999999999999988999999999999-80479999998-----64068999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
Q ss_conf 4103444554000232010100022223443333-232233321110000111223310000000001222221221110
Q gi|254780866|r 215 FFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVS 293 (499)
Q Consensus 215 l~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~a 293 (499)
+++|...|+||+|||.||||| +||||||||++| ++++++|+|.++|+. +++. ..+.+...+.++|.+|++++++.|
T Consensus 185 l~l~a~tKSAQ~Pfh~WLP~A-M~aPTPVSALvHSsTmVtAGVyLliR~~-~~~~-~~~~~~~~l~~ig~~T~l~a~~~A 261 (572)
T MTH00207 185 ITIAAMTKSAQMPFSSWLPAA-MAAPTPVSALVHSSTLVTAGVFLLIRFY-PFLS-STTWFNPTLLLIASMTMLMAGLSA 261 (572)
T ss_pred HHHHHHHHHHHCCCCHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999997763017672313676-1799819999999999997899998852-7644-129999999999999999999999
Q ss_pred CEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH-HHCCCCCCHHHHHHHHHHCC
Q ss_conf 00024432233210013540233310487542210234555421023330356777764-20011110023556542023
Q gi|254780866|r 294 MVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYD-RLHTRDIFAYGGLVHNMPRY 372 (499)
Q Consensus 294 l~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~-~~g~~~l~~l~Gl~~~~P~~ 372 (499)
+.|+|+||++||||++|.|+++.+++.|.+ ..+++|+++|+++|+.+|+|+|.+.+ ..|++|+|++||+.+++|.+
T Consensus 262 ~~q~DlKkiiA~STlSQLG~M~~~lglg~~---~la~fHL~~HA~FKAlLFl~aG~iIh~~~~~QDiR~mGgl~~~~P~t 338 (572)
T MTH00207 262 MTECDMKKIIALSTLSQLGVMMASLGLGMP---KLAFFHLLTHALFKALLFICAGSIIHSHHHSQDLRWMGNLTNQMPLT 338 (572)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHH
T ss_conf 986224024441139899999999867879---99999998899999999981069997147986099875986544899
Q ss_pred CCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 3201345555301024443112289999999865--99999999999999999999999997288987655568788912
Q gi|254780866|r 373 AVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNS--NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLR 450 (499)
Q Consensus 373 ~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~ 450 (499)
..++.++.+|++|+||++||+||+.|+|..+.++ .....+..+++.+++.|+.|....+++++++.+.....+|.+..
T Consensus 339 ~~~~~i~~lsL~G~PflsGFySKD~IlE~~~~~~~n~~~~~l~~~s~~lT~~YS~Rl~~~~~~~~~~~~~~~~~~~~~~~ 418 (572)
T MTH00207 339 TSCLLIANLALCGSPFLSGFYSKDMIIESSLFYPNNSLIILMFIFATALTAAYSTRFMLTVIWSPNSSAPYHHLEDNDLN 418 (572)
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
T ss_conf 99999999998288720146327999999997720799999999999999999999999998089999876518789888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6899999999999997724889
Q gi|254780866|r 451 ERCMVYPIAVLTVFFGIYPVPI 472 (499)
Q Consensus 451 ~~~~~~~l~~~~i~lGi~p~~~ 472 (499)
+..|+..+...++..|-.-++.
T Consensus 419 ~~~p~~~L~~~si~~G~~l~w~ 440 (572)
T MTH00207 419 LTTPMLLLTLGAITSGAALNWW 440 (572)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999987
No 78
>PRK06459 hydrogenase 4 subunit B; Validated
Probab=100.00 E-value=0 Score=500.01 Aligned_cols=375 Identities=19% Similarity=0.255 Sum_probs=312.6
Q ss_pred EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 52258899999999999999975201121002356789998630243026540433111234310343123553123433
Q gi|254780866|r 80 GVDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSE 159 (499)
Q Consensus 80 ~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~ 159 (499)
..|+++.+|..+++.++.++.+||.+|++ ..+.+..++.++..+|.+++.|+|.++++++||++++++|.|+..++++
T Consensus 40 ~~~pl~~ff~iii~~v~~~~~~ySi~Y~~-~~~~~~~l~~lFi~sMllvv~a~n~~~F~v~WElMsL~Sy~LI~~~~~~- 117 (578)
T PRK06459 40 QEYPYLSFFYIIAGLVWVLASLYSLSYDY-YGKWLSMLYSLTVLGMIIVLTSDNYLEFLAGWETMTIPSYVIIALYRKD- 117 (578)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC-
T ss_conf 82749999999999999999999211442-5159999999999999999997309999999999999999999970555-
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCC--CCCCCCC
Q ss_conf 23210001135544556776665544321000100344321013303789999854103444554000232--0101000
Q gi|254780866|r 160 RIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHT--WLPNAHV 237 (499)
Q Consensus 160 ~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~--WlP~~y~ 237 (499)
.+++++|+.++.+|+.+++.|+..+|..+|++|+.++.+. ..+++..+||+.|+|++|||. |+||+|+
T Consensus 118 -~~aa~~y~~~~~~G~~~ll~~~~ll~~~~Gs~~f~~~~~~---------~~~lL~~~GFg~KaG~~Pfhvh~WLP~Ah~ 187 (578)
T PRK06459 118 -WKPAFTFMAFGELSTVLILAGFALAYSQTGSFNFERLSTQ---------VPLIITSFGFIIKMGMFPFLVSEWLPIAHG 187 (578)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHH---------HHHHHHHHHHHHHHCCCCCHHHCCCCCCCC
T ss_conf -0078999999999999999999999998088248877878---------999999999999851051033311740117
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHH
Q ss_conf 22223443333232233321110000111223310000000001222221221110000244322332100135402333
Q gi|254780866|r 238 QAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIG 317 (499)
Q Consensus 238 ~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~ 317 (499)
+||+++|+++||+++|+|+|+++|+.. +. ...++|...+..+|.+|+++|++.|+.|+|+||++|||||+|+|+++++
T Consensus 188 ~aPs~vSal~Sg~m~k~gvyg~~r~~~-l~-~~~~~~g~~~~~~G~~s~~~G~l~A~~q~D~KrlLAYSsi~niG~i~~~ 265 (578)
T PRK06459 188 NAPSNASAVLSATMTLMGVYGILKMES-LS-PVSPYLGIFLLAIGAFSILFGALYSYVSDHVKGLLAFSTIENNGAILVA 265 (578)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHH-HC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899579999999999999999999999-60-3535999999999999999999999987628999988349988999999
Q ss_pred HCCCC--------CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHH
Q ss_conf 10487--------5422102345554210233303567777642001111002355654202332013455553010244
Q gi|254780866|r 318 IFSGM--------KSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGT 389 (499)
Q Consensus 318 l~~~~--------~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~ 389 (499)
+|.+. ..++.++++|.+||+++|+++|+++|.+.++++++|+++++|+ ++..++++.+|++|+||+
T Consensus 266 lGl~~~~~~~~l~~~~~~a~l~h~~nHa~fK~lLFl~aG~v~~~~~~~~~~~~~gl------t~~~~lig~~sisglPP~ 339 (578)
T PRK06459 266 LGLYLELVSSDLREFVLFTVIIYSIAHSLAKTGLFLSSGYVEGEYLTTARSFEYGL------SVLGAVLLAMSLSGLLPT 339 (578)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHCCCH------HHHHHHHHHHHHHCCCCC
T ss_conf 99999814505799999999999999999999999710638998625525640678------999999999999629985
Q ss_pred HHHCCHHHHHHHHHHHH----HH-------HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 43112289999999865----99-------99999999999999999999999728898765556878891268999999
Q gi|254780866|r 390 SGFIGEFLVIMSVFQNS----NT-------VAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPI 458 (499)
Q Consensus 390 ~GF~~k~~i~~~~~~~~----~~-------~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l 458 (499)
+||+|||+++|+.++.. .. ......++..+....+.|.+...|.+++|+++..+.+|.+... .
T Consensus 340 nGFvseWli~qs~~~~~~~~~~~~~~~~~~~~~~lAlt~ala~~~~vk~~g~~fl~~pr~~~a~~a~e~p~~~------~ 413 (578)
T PRK06459 340 IGGVATWMLLESLFMEAYTLPHFIGILPIIAGAMIAMGEGLATGSLIKYISYTQLFRPIKDHASKIKQGPILA------V 413 (578)
T ss_pred CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCCHHH------H
T ss_conf 5588999999999970555313899999999999999999999999999971001889975677440155899------9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999772488999999999
Q gi|254780866|r 459 AVLTVFFGIYPVPIRDTFSVPL 480 (499)
Q Consensus 459 ~~~~i~lGi~p~~~~~~~~~~~ 480 (499)
...++.++..+....+......
T Consensus 414 ~~~~~ll~~~~~~~i~~~~~~~ 435 (578)
T PRK06459 414 GLIVLILTVGLAYLISPFRTGV 435 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999998636888777
No 79
>TIGR00944 2a6301s04 Multicomponent K+:H+antiporter; InterPro: IPR004775 A group of uncharacterised proteins some of which are similar to various chains of the NADH-ubiquinone/plastoquinone (complex I).; GO: 0015386 potassium:hydrogen antiporter activity, 0006812 cation transport, 0016021 integral to membrane.
Probab=100.00 E-value=0 Score=492.04 Aligned_cols=455 Identities=21% Similarity=0.379 Sum_probs=389.5
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCCEEEEEEEEECCCCCEEEEEEEE
Q ss_conf 8999999999999998720355303579999999999999999999986308---8881899986313485405466522
Q gi|254780866|r 6 LSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDK---GRSSFQMIEYYHWIDYFCSYHLGVD 82 (499)
Q Consensus 6 l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~iD 82 (499)
+-+.+++|++.+.++.+.. ++++-..+.++.+.+.++++.+.......-. +-.+.+..+.++|.-|+ ++-+..|
T Consensus 3 liL~iliP~~~AilLifi~--krd~~lkr~~~~a~tl~~~v~s~Il~~~v~~GtGsl~G~~~~~LG~WkAPy-gIVlvlD 79 (504)
T TIGR00944 3 LILAILIPVLVAILLIFIN--KRDRILKRIIALASTLVVLVLSIILLRLVVAGTGSLKGSGVLELGNWKAPY-GIVLVLD 79 (504)
T ss_pred CHHHHHHHHHHHHHHHCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHH-HHHHHHH
T ss_conf 0388899999998862167--750688889988899999999999999984136765775255248710617-9999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHH--HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf 58899999999999999975201121002--3567899986302430265404331112343103431235531234332
Q gi|254780866|r 83 GISILLVVLTTFLTPFCILSSWKSIQENF--REYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSER 160 (499)
Q Consensus 83 ~ls~~f~~l~~~i~~l~~~ys~~~~~~~~--~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~ 160 (499)
.+|.++++++..++.++..||+++.++++ ..||....++..|+.|.|+++|+||+|+|+|++..+||.|+-+.++|-|
T Consensus 80 ~fsaLl~~~t~ii~l~v~lYS~~~~g~~rER~~yys~vqfllaG~~GAFlTGDlFNlfVFFE~~L~aSY~Llv~Gstki~ 159 (504)
T TIGR00944 80 RFSALLVLTTSIIALLVQLYSYARVGTKRERYYYYSLVQFLLAGVNGAFLTGDLFNLFVFFELLLIASYGLLVLGSTKIQ 159 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 99999999999999999986256522255505789999999998755778547999999999999999999997697202
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC----CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 321000113554455677666554432100010034432101----3303789999854103444554000232010100
Q gi|254780866|r 161 IYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSK----FPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAH 236 (499)
Q Consensus 161 ~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~----~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y 236 (499)
.+++.||..+|.++|.++++|+.++|..+||+|+.|+.+... .+...-....+++.+.|++|+|+||+.+|||.+|
T Consensus 160 l~e~lkYi~vN~vsSalFviGV~~lY~v~GTLNmADls~Kla~Le~~~~gLv~~~~~ll~~vF~~KaG~fPl~fWLP~aY 239 (504)
T TIGR00944 160 LKEGLKYIVVNVVSSALFVIGVSLLYAVAGTLNMADLSTKLAALEARSRGLVEVVSVLLLLVFLVKAGVFPLYFWLPTAY 239 (504)
T ss_pred EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCC
T ss_conf 21020344577899999999999999998775699999998526888762357899999999987337563000032001
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC----CCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
Q ss_conf 02222344333323223332111000011122331----00000000012222212211100002443223321001354
Q gi|254780866|r 237 VQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLAS----QYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMG 312 (499)
Q Consensus 237 ~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~----~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G 312 (499)
..+|.|+++++-++.+|+|+|.+.|.....|.+.. ..-++++++.|.+|+++|...++...|+||+..|+-+--.|
T Consensus 240 yApp~pi~a~FGAlLTKVG~YaI~R~~~L~F~~~~Gass~F~~~~~~~la~LTiiFG~iG~lAy~n~~ki~~Ynv~~avG 319 (504)
T TIGR00944 240 YAPPAPIAALFGALLTKVGIYAIIRLFLLVFGDDAGASSAFGHELLVFLALLTIIFGGIGVLAYANVKKIVLYNVLVAVG 319 (504)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 11424699987689988999999999999863210454313799999999999998679999999876999999999988
Q ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCC------CCCCHHHHHHHH-------------HHCCC
Q ss_conf 02333104875422102345554210233303567777642001------111002355654-------------20233
Q gi|254780866|r 313 YVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHT------RDIFAYGGLVHN-------------MPRYA 373 (499)
Q Consensus 313 ~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~------~~l~~l~Gl~~~-------------~P~~~ 373 (499)
-++.+++.+++.++.||++|.++..+.|..+|+.+|.+++-+|| -|++++||+-|| +|.++
T Consensus 320 viL~gVa~~t~~~~~GAiyYl~~d~L~~gAlFlLig~~i~~~gtGadvlaa~l~~~GglikreeeeevGaaiPGtypVLG 399 (504)
T TIGR00944 320 VILVGVALGTDASLAGAIYYLVHDMLVKGALFLLIGLLIRLTGTGADVLAATLEKYGGLIKREEEEEVGAAIPGTYPVLG 399 (504)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHH
T ss_conf 99976640571478999999999999999999999999973067637888879983896432111012455775103788
Q ss_pred CCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCC-CCC
Q ss_conf 20134555530102444311228999999986-----------599999999999999999-99999999728898-765
Q gi|254780866|r 374 VVMMVFTMANMGLPGTSGFIGEFLVIMSVFQN-----------SNTVAVLASFGVVLSALY-SLWLYRKVVFGVSK-CEK 440 (499)
Q Consensus 374 ~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~-----------~~~~~~~~~~~~~ls~~~-~l~~~~~~~~g~~~-~~~ 440 (499)
.+|++++++++|+||++||++|+.+.++.+|. +.|.....++-+.+-+.| ..|++.|.|||+++ +.+
T Consensus 400 w~Ffi~AlsLAGiPPLSGF~gKF~i~~g~F~~Paaelatamsag~~t~~~l~lLSsL~vlysv~RIfi~~Fwg~~kG~~p 479 (504)
T TIGR00944 400 WSFFIAALSLAGIPPLSGFIGKFAIVEGLFDRPAAELATAMSAGDYTIVVLVLLSSLVVLYSVLRIFIRTFWGEEKGEIP 479 (504)
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99999999855777402577888875044454178999886426899999999999999999999987641267578889
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 556878891268999999999999
Q gi|254780866|r 441 VQQLKDLSLRERCMVYPIAVLTVF 464 (499)
Q Consensus 441 ~~~~~~~~~~~~~~~~~l~~~~i~ 464 (499)
.++..|++. -..+..++.++++.
T Consensus 480 ~~~~~~~k~-l~~~a~~~~~lsll 502 (504)
T TIGR00944 480 RVNKIEVKP-LVVLAAVAILLSLL 502 (504)
T ss_pred CCCEEEEEH-HHHHHHHHHHHHHH
T ss_conf 853366402-79999999999972
No 80
>PRK12664 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=0 Score=497.34 Aligned_cols=369 Identities=19% Similarity=0.315 Sum_probs=305.5
Q ss_pred EEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEEC
Q ss_conf 54665225889999999999999997520112100235678999863024302654043311123431034312355312
Q gi|254780866|r 76 SYHLGVDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVW 155 (499)
Q Consensus 76 ~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~ 155 (499)
++++.+-+++..+..+.+....+..+|.+.-+++.. +.....++..+++.|++.|+|++++|++||++++++++||..+
T Consensus 29 ~~~~~~~~~~lv~~~~~~~~~~~~~l~~~~~~~~~~-~e~~~~LlY~gSaLGvV~AgDLitLfIFWElmaisS~~LI~~~ 107 (530)
T PRK12664 29 NIGLPVYNYDLVLFIVLSFILSLIFLYILPIKNLTF-SEMLLYLLYYLSSIAAISSSSLLLVVISFEIMALSAVMIIAAG 107 (530)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 332544443289999999999999999998233028-8999999999999999997519999999999999999998718
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 34332321000113554455677666554432100010034432101330378999985410344455400023201010
Q gi|254780866|r 156 GGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNA 235 (499)
Q Consensus 156 ~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~ 235 (499)
+++++.+++.+|.+++..++..++.|....+...+ .......++++|+++|+|++|+|.|+||+
T Consensus 108 ~t~~s~~Ag~rYl~vh~~gG~iLL~G~~~~~~~~~----------------~~~l~~lliliG~~iKaA~fPlH~WLPdA 171 (530)
T PRK12664 108 CNGGNMGAVIHYACVHFFSGVLLLVGASGQAVNGD----------------YNGYCKLFFLIGLLINCACFPASSWVVDA 171 (530)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----------------CCHHHHHHHHHHHHHHHCCCCCHHCCCCC
T ss_conf 88246899999999999999999999999975254----------------00499999999999995788440101431
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHH
Q ss_conf 00222234433332322333211100001112233100000000012222212211100002443223321001354023
Q gi|254780866|r 236 HVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVT 315 (499)
Q Consensus 236 y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~ 315 (499)
|++||+++++++|+.++|+|+|+++|.. ....+++++|.+|+++|++.|+.|+|+||++|||||+|+|||+
T Consensus 172 y~~A~~~~s~llSa~~tK~avY~L~R~f---------~g~~iLi~lG~it~v~G~i~Al~Q~DiKRlLAYSsVsQiGymv 242 (530)
T PRK12664 172 YPAASNNGIIVLSLFTTKVAAFVLLLFF---------QGEEILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLI 242 (530)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHH---------HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6799636789999999999999999995---------0647999999999999999999987499999999998999999
Q ss_pred HHHC---CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHH
Q ss_conf 3310---4875422102345554210233303567777642001111002355654202332013455553010244431
Q gi|254780866|r 316 IGIF---SGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGF 392 (499)
Q Consensus 316 ~~l~---~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF 392 (499)
+++| .++..+..++++|+++|+++|+.+|+++|.+.+++||+|++|+||++|+||+++.++.++.+|++|+||++||
T Consensus 243 ~giG~~~ig~~~a~~~ai~H~~~H~l~KalLFm~aGaV~~~TGt~~i~~LGGL~k~MP~Ta~~~lIgalSiaG~Pp~sGF 322 (530)
T PRK12664 243 TAIGFSYSSSVSVIGIIILQIVLSVVYQTLLFMVADSVINRTRKFNLNEVGGLFKKMSVEAICSIIAILNMGAFPGTAGF 322 (530)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 99865112217689999999999999999999998799998087117885589876119999999999998468852207
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 1228999999986599999999999999999----999999997288987655568788912689999999999999772
Q gi|254780866|r 393 IGEFLVIMSVFQNSNTVAVLASFGVVLSALY----SLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIY 468 (499)
Q Consensus 393 ~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~~----~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~ 468 (499)
+||.++.+++-+.+....+...+-...+... -+|...-.|+++.+ ...+.+|.|+.++..+.+++.+|+.+|+|
T Consensus 323 vSKsli~~a~~~~~~~~~~~~~l~~~a~~~~~~~~gik~~~f~f~~~~~--~~~~~~~~p~~m~~aM~i~a~lci~~Gv~ 400 (530)
T PRK12664 323 VSKSLITHSIDTTDLTNVLYKKLFLICSLLLFASVGLKFFWYAFISKSR--SKPEANKVKQGSKLSMIILVLICVVLGVF 400 (530)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC--CCCCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 8889999987757856999999999976899861587713567761677--78887887562899999999999613647
Q ss_pred HHHH
Q ss_conf 4889
Q gi|254780866|r 469 PVPI 472 (499)
Q Consensus 469 p~~~ 472 (499)
|+.+
T Consensus 401 ~~~l 404 (530)
T PRK12664 401 GSYL 404 (530)
T ss_pred CCCC
T ss_conf 4124
No 81
>MTH00095 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=482.27 Aligned_cols=376 Identities=22% Similarity=0.329 Sum_probs=321.0
Q ss_pred CEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEE
Q ss_conf 40546652258899999999999999975201121--0023567899986302430265404331112343103431235
Q gi|254780866|r 74 FCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVI 151 (499)
Q Consensus 74 ~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~L 151 (499)
..++.+..|..|..|..++..++..+..||.+|++ ++.+||+.++.++..+|.+++.|+|+++++++||.+++++|.|
T Consensus 36 ~~s~~f~fd~~Sl~F~~~v~~Is~~V~~YS~~YM~~d~~~~rF~~~l~lFi~SMl~LV~S~nll~l~lgWE~lGl~SylL 115 (527)
T MTH00095 36 FLSFKFNFYFNSLLFSLILLLVFFSVLVFSTYYMDGELNFNYFYFVLLIFVGSMFLLIFSNSVFTMLLSWDLLGISSFFL 115 (527)
T ss_pred CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 44322009987899999999999999999899727998914999999999999999999802999999999999999999
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 53123433232100011355445567766655443210001003443210133037899998541034445540002320
Q gi|254780866|r 152 IGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTW 231 (499)
Q Consensus 152 i~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~W 231 (499)
|.+|+++++.++|.|+++.+++|+..++.+..............+ ........++++|...|+||+|||.|
T Consensus 116 I~fy~~~~s~~aa~~t~l~nRiGD~~ll~~~~~~~~~~~~~~~~~---------~~~~~~~~ll~i~a~tKSAQfPfh~W 186 (527)
T MTH00095 116 VLFYNNWNSCSGAMNTVLTNRLGDFFIFLFFSGFIFSSYYFLSFS---------FFSSSMSLMLLLASFTKSAQFPFSSW 186 (527)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 820698889999999999999999999999999999978999888---------99999999999999998420656232
Q ss_pred CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
Q ss_conf 1010002222344333-323223332111000011122331000000000122222122111000024432233210013
Q gi|254780866|r 232 LPNAHVQAPTAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAH 310 (499)
Q Consensus 232 lP~~y~~ap~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~ 310 (499)
||||+ +||||+||++ |++++++|+|.++|...... +......+.++|.+|+++|++.|+.|+|+||++||||++|
T Consensus 187 LP~AM-~APTPVSALvHSsTlVtAGVyLliR~~~~~~---~~~~~~~ll~iG~lT~~~~~l~Al~q~DiKkilAySTlSQ 262 (527)
T MTH00095 187 LPKAM-AAPTPVSSLVHSSTLVTAGLYLLMNFSYPLM---NKNVLKIMLLIGLFTMFFSSLSALVEEDLKKVVALSTLSQ 262 (527)
T ss_pred HHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 46761-7999367999778999989999999999982---3899999999999999999999984765899999998989
Q ss_pred CCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH-HCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHH
Q ss_conf 5402333104875422102345554210233303567777642-001111002355654202332013455553010244
Q gi|254780866|r 311 MGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDR-LHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGT 389 (499)
Q Consensus 311 ~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~-~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~ 389 (499)
+|++..+++.|. ...+++|+++|++.|+.+|+++|.+.+. .|+||+|++||+.+.+|.+..++.++.++++|+||+
T Consensus 263 LG~M~~~lGlG~---~~la~fHL~~HA~FKalLFL~aG~iIh~~~g~QDiR~mggl~~~~p~~~~~~~i~~lsL~G~Pfl 339 (527)
T MTH00095 263 MGFSMLTFGSGL---SFLSFFHLLSHALFKSCLFMQVGYLIHCMFGQQDGRNYSNLGNLPVFIQLQMLVTLFCLCGLFFT 339 (527)
T ss_pred HHHHHHHHHHCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHH
T ss_conf 999999998566---99999999999999999999778999836994178986586655389999999999998554353
Q ss_pred HHHCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 43112289999999865--9999999999999999999999999728898765556878891268999999999999977
Q gi|254780866|r 390 SGFIGEFLVIMSVFQNS--NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGI 467 (499)
Q Consensus 390 ~GF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi 467 (499)
+||+||+.++|....++ .+...+..++..++..|+.|.+...+.+..+... ..+.+..+..+...+....+..|.
T Consensus 340 sGFySKD~ILe~~~~~~~~~~~~~l~~~s~~lT~~YS~Rl~~~~f~~~~~~~~---~~~~~~~~~~~~~~l~~~si~f~~ 416 (527)
T MTH00095 340 SGFVSKEFILELFFSNSFMIFFSFMFFFSVFLTFGYSYRLWKSFFLSFSKSVY---NYSSSVVMNFLSLLLVFFSIFFLW 416 (527)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH---HCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 28988999999999811899999999999999999999999999926676430---002218999999999999999999
Q ss_pred H
Q ss_conf 2
Q gi|254780866|r 468 Y 468 (499)
Q Consensus 468 ~ 468 (499)
+
T Consensus 417 ~ 417 (527)
T MTH00095 417 W 417 (527)
T ss_pred H
T ss_conf 9
No 82
>TIGR01960 ndhF3_CO2 NAD(P)H dehydrogenase, subunit NdhF3 family; InterPro: IPR010217 This family represents NAD(P)H dehydrogenase subunit 5, or ndhF. It is restricted to two paralogs in each completed cyanobacterial genome, in which several subtypes of ndhF are found. Included in this family is NdhF3, shown to play a role in high-affinity CO2 uptake in Synechococcus sp. PCC7002. In all cases, neighbouring genes include a paralog of ndhD but do include other NAD(P)H dehydrogenase subunits. Instead, genes related to C02 uptake tend to be found nearby.; GO: 0008137 NADH dehydrogenase (ubiquinone) activity, 0042773 ATP synthesis coupled electron transport.
Probab=100.00 E-value=0 Score=462.95 Aligned_cols=464 Identities=21% Similarity=0.304 Sum_probs=420.6
Q ss_pred CCCCHHHHHHHHH---HHHHHHHHHHH---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCC
Q ss_conf 9830789999999---99999998720---35530357999999999999999999998630888818999863134854
Q gi|254780866|r 1 MNLPFLSIVTFLP---FLGVFVILFSS---YLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYF 74 (499)
Q Consensus 1 m~~p~l~lii~lP---ll~~li~~~~~---~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (499)
|+.-++..+-.+| ++|+++..... .++.+.|.+-.+.+..+...++.++.+.....+..+..-..++.+-.+..
T Consensus 1 M~~fL~~t~W~vP~Y~L~G~~L~lPWs~G~~R~TGPRPAaY~N~lmT~vaf~Hsl~~l~~iw~~p~~~l~~~WL~~AdL~ 80 (613)
T TIGR01960 1 MLQFLLETSWLVPFYALIGALLALPWSPGIVRKTGPRPAAYFNLLMTFVAFVHSLLALQAIWSQPPEELVFTWLQAADLD 80 (613)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
T ss_conf 91347889889888999999998444438402688984789999999999999999999972799544863320579998
Q ss_pred EEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHH--HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEE
Q ss_conf 0546652258899999999999999975201121002--35678999863024302654043311123431034312355
Q gi|254780866|r 75 CSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQENF--REYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVII 152 (499)
Q Consensus 75 ~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~--~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li 152 (499)
+++.+.+..+|.--..+++.+.+++-+|+.+|+|+|. .|||.++-++.+|+.++.++|++|.=|+-.|+.|+++|.||
T Consensus 81 L~~~leIS~v~~gAl~liTGLnllAQIfAlGYmEkDWglARFf~LLglFEAaL~glvl~dSLFlSYvlLEiLTLsTYLLv 160 (613)
T TIGR01960 81 LSFALEISSVSTGALVLITGLNLLAQIFALGYMEKDWGLARFFALLGLFEAALSGLVLSDSLFLSYVLLEILTLSTYLLV 160 (613)
T ss_pred CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 54201211167999999999999999987543433324799999999999999999999878888999999998899998
Q ss_pred EECC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH---HHHCCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 3123-433232100011355445567766655443210001003443---210133037899998541034445540002
Q gi|254780866|r 153 GVWG-GSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLY---AMSKFPFSIQYWMWIAFFCSFAIKIPMFPF 228 (499)
Q Consensus 153 ~~~~-~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~---~~~~~~~~~~~~~~~ll~~g~~~K~~~~Pf 228 (499)
++|. .+-=+++|+..|.--|+||+++|+|+.-++...||+|++|+. +..+.+.....+.-+.++.|=..||||||+
T Consensus 161 GfWfaQPLVVtaARDAFLTKRVGDl~LLMGVvaL~pLAGs~ny~~L~~WA~tA~l~~~~~TLlgLaLIAGP~GKCAQFPL 240 (613)
T TIGR01960 161 GFWFAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGSWNYDDLAEWAATANLDPTTATLLGLALIAGPTGKCAQFPL 240 (613)
T ss_pred HHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 88870230331442110234788999998999984214678827799998205898268888889997401322246875
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCC
Q ss_conf 32010100022223443333232233321110000111223310000000001222221221110000244322332100
Q gi|254780866|r 229 HTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSI 308 (499)
Q Consensus 229 H~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi 308 (499)
|-||=|| ||.|.|.|.+--++++-.|.|.++| .+|++. .++.-...++++|.+|++-+++.|+.|.|+||-|.||+-
T Consensus 241 HLWLDEA-MEGP~PAsIlRNsvVVA~GAyvLiK-LQPvL~-LSPvA~~~li~IG~VTAig~SLiaIAQiDIKR~LSysvS 317 (613)
T TIGR01960 241 HLWLDEA-MEGPNPASILRNSVVVAAGAYVLIK-LQPVLT-LSPVALTVLIAIGSVTAIGASLIAIAQIDIKRALSYSVS 317 (613)
T ss_pred CCHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHH-HCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4100021-4788842678778988864422100-210542-115899999898557888788999999879889989999
Q ss_pred CCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHH
Q ss_conf 13540233310487542210234555421023330356777764200111100235565420233201345555301024
Q gi|254780866|r 309 AHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPG 388 (499)
Q Consensus 309 ~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp 388 (499)
+-||++++++|.+.. +.|++.+++|+++|+.||||.|.+.-++.|+|++|+|||++|||.++.+|++|..++.|+||
T Consensus 318 aYmGLVFIAVG~~q~---~~Al~lllTha~A~AlL~MS~GsiI~n~~tQDlT~lGGLWsRrPisg~sFvVGsagLia~~P 394 (613)
T TIGR01960 318 AYMGLVFIAVGLGQG---ELALLLLLTHAIAKALLFMSIGSIIFNTVTQDLTELGGLWSRRPISGLSFVVGSAGLIALPP 394 (613)
T ss_pred HHHHHHHHEECCCCC---CHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 876365621137886---43578889999999998510575655177622131388746661334469999679987453
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 44311228999999986599999999999999999999999997288987655568788912689999999999999772
Q gi|254780866|r 389 TSGFIGEFLVIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIY 468 (499)
Q Consensus 389 ~~GF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~ 468 (499)
+.+||+-.-..++.++..+|+.-+.++.+.++|.-..|.|+-+|.|++++ +.++.+|+.|.+.+||..+.++.+.+-+.
T Consensus 395 LG~FWa~~~l~d~~~~~~PwlvGvll~VN~ltA~nLtR~F~LvF~G~akp-kT~RsPEV~Wpm~lPMv~l~il~LllPl~ 473 (613)
T TIGR01960 395 LGSFWAWLKLADGLWATSPWLVGVLLLVNLLTAFNLTRVFRLVFGGKAKP-KTRRSPEVLWPMALPMVVLIILVLLLPLI 473 (613)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 12589999986245544159999999999998765420024454178888-74568787763145339999999999999
Q ss_pred HHH
Q ss_conf 488
Q gi|254780866|r 469 PVP 471 (499)
Q Consensus 469 p~~ 471 (499)
++-
T Consensus 474 l~~ 476 (613)
T TIGR01960 474 LQQ 476 (613)
T ss_pred HHH
T ss_conf 998
No 83
>KOG4845 consensus
Probab=100.00 E-value=0 Score=449.88 Aligned_cols=446 Identities=39% Similarity=0.658 Sum_probs=394.1
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHH
Q ss_conf 99999987203553035799999999999999999999863088881899986313485405466522588999999999
Q gi|254780866|r 15 LGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLGVDGISILLVVLTTF 94 (499)
Q Consensus 15 l~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iD~ls~~f~~l~~~ 94 (499)
++.....+.+....++++. ..+......+..+.+.+..++..+.. + ..+++.+++|++|..++.++++
T Consensus 4 l~~~~~l~lp~~~i~~~~l--~wlc~~~i~flls~v~~~~~~~~n~~------~----~~~~~~lgiD~lS~~lliLtt~ 71 (452)
T KOG4845 4 LIGSLMLFLPFLFISVNKL--YWLCFKIIYFLLSTVPFLFNNFMNDL------F----FWISLFLGIDGLSFGLLILTTF 71 (452)
T ss_pred HHHHHHHHHHHHCCCHHHE--EEEHHHHHHHHHHHHHHHHHHHHHHH------H----HHEEEEEEECHHHHHHHHHHHH
T ss_conf 4422998710311561014--40069899999999999998740134------4----4012577436178899999999
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-CCCCCCCHHHHHHHH
Q ss_conf 9999997520112100235678999863024302654043311123431034312355312343-323210001135544
Q gi|254780866|r 95 LTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS-ERIYAAYKFFLYTFF 173 (499)
Q Consensus 95 i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~-~~~~aa~ky~i~~~~ 173 (499)
+..+++..+.+...+++|.|..........+.+.+.+.|++.+|++||...+|.+.++..||++ ||.+||.+++.++..
T Consensus 72 i~~l~i~as~~~~~~~~k~~l~~~lil~~~~I~~F~~~dLlmFYiffE~~lIP~l~lI~~wG~q~erl~aa~yflfYTl~ 151 (452)
T KOG4845 72 IIPLIILASEKGNNNYKKLFLILSLILVFLLIITFSSSDLLMFYIFFELSLIPTLVLILGWGSQPERLNAAYYFLFYTLL 151 (452)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 99999996053556333489999999999999976078999999999740777999998716857887778999999998
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 55677666554432100010034432101330378999985410344455400023201010002222344333323223
Q gi|254780866|r 174 GSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLK 253 (499)
Q Consensus 174 ~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k 253 (499)
+|..+|+|+...-.+.|+.|+.-... ...+...+...+..+.++|++|++++|.|.|+||+|.|||+..|++++|++.|
T Consensus 152 ~SlplLi~il~~~~~~gs~~~~~~~l-t~~~~~~~~lm~i~~~~aF~VK~Pi~~lHlWLPkAHvEAp~sgsMlLAGilLK 230 (452)
T KOG4845 152 GSLPLLIGILYINNYGGSLNFLLLNL-TSYPFVISILMYIALLLAFAVKMPIYPLHLWLPKAHVEAPTSGSMLLAGILLK 230 (452)
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHCCCHHHEEECCHHHCCCCCHHHHHHHHHHHH
T ss_conf 55999999999961365323588871-22088999999999999999838613410324342046864174999989997
Q ss_pred CCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHH
Q ss_conf 33211100001112233100000000012222212211100002443223321001354023331048754221023455
Q gi|254780866|r 254 MGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQM 333 (499)
Q Consensus 254 ~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~ 333 (499)
.|.|+++|+.. ++|..+...+++..+++.+++++++..+.+|+|+|+++|||||+|||++++++...+..|..|++..+
T Consensus 231 lG~yG~lR~~~-il~~~t~~~s~~~l~is~igiI~~S~~c~rQ~DLK~lIAYSSVsHM~~v~igi~s~T~~g~~GsillM 309 (452)
T KOG4845 231 LGTYGFLRINM-ILPSATLVHSPVWLVISLIGIIYTSSTCLRQTDLKKLIAYSSVSHMGFVLIGILSITMWGLIGSILLM 309 (452)
T ss_pred CCCCCCHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 27742024877-60157651130999999999999850273401279899872367778899876304541102579999
Q ss_pred HHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 54210233303567777642001111002355654202332013455553010244431122899999998659999999
Q gi|254780866|r 334 LSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSNTVAVLA 413 (499)
Q Consensus 334 ~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~~~~~~~ 413 (499)
++|++..+++|.++|..|+|.|+|-++.++|+...+|..+..|.+..+|..+.||+.+|.||+-++.+.++......++.
T Consensus 310 iaHGl~ss~LF~lag~~YdR~~sr~m~~~~Gl~ssmp~m~~~f~~~slANla~Ppt~~flgEf~vl~~~~s~s~~~~~l~ 389 (452)
T KOG4845 310 IAHGLTSSALFCLAGVSYDRSGSRMMYFMGGLFSSMPIMGTWFFLLSLANLALPPTSSFLGEFSVLVGIFSWSKIMFVLI 389 (452)
T ss_pred HHCCCHHHHHHHHHCCCHHHCCCEEHHHHCCHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98133176999971642521251532442118775679999999999974579962667888899998999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999972889876555687889126899999999999997724889999
Q gi|254780866|r 414 SFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRDT 475 (499)
Q Consensus 414 ~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~~~ 475 (499)
.++..+++.|.++.++++.+|+..+... +..|...||...+.......+.+|++|+...+.
T Consensus 390 ~i~milta~YsL~l~t~~~~Gkl~~~~n-sf~~s~~Re~~Lmi~~l~pl~~l~l~pd~~~~~ 450 (452)
T KOG4845 390 AIGMILTAAYSLYLYTSSQMGKLYHNFN-SFSDSFSRELVLMIYHLLPLSLLGLYPDFFLSL 450 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHEECHHHHHHH
T ss_conf 9999999999999999998645525632-347788731355899999878541280886631
No 84
>pfam00361 Oxidored_q1 NADH-Ubiquinone/plastoquinone (complex I), various chains. This family is part of complex I which catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Probab=100.00 E-value=0 Score=464.38 Aligned_cols=268 Identities=37% Similarity=0.677 Sum_probs=249.8
Q ss_pred ECCCCCHHHHHHHCCCCCEEEEEECCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHH
Q ss_conf 404331112343103431235531234-3323210001135544556776665544321000100344321013303789
Q gi|254780866|r 131 SLDMLLFYIFFEASLIPMFVIIGVWGG-SERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQY 209 (499)
Q Consensus 131 s~dl~~l~v~~El~~l~~~~Li~~~~~-~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~ 209 (499)
|+|++++|++||++++++|.|+.+|++ +++.||++||++++.+|+.++++|+..+|..+|++|+.++.... .+.....
T Consensus 1 s~dl~~~~v~~El~~l~~y~Li~~~~~~~~~~~Aa~ky~i~~~~~s~~lL~gi~~ly~~~gt~~~~~~~~~~-~~~~~~~ 79 (270)
T pfam00361 1 SNNLLLFYLGWELLGLPSYLLIGFWGYSPRSLEASLKYFLYTALGSLFLLFGILYIYGLTGSLSFTLLFLFG-LNSNGLL 79 (270)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC-CCCHHHH
T ss_conf 974999999999999999999883499999999999999999999999999999999986222699998643-5634899
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCC
Q ss_conf 99985410344455400023201010002222344333323223332111000011122331000000000122222122
Q gi|254780866|r 210 WMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYA 289 (499)
Q Consensus 210 ~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g 289 (499)
....++++|+++|+|++|||.|+||+|+++|++++++++++++|+|.|+++|+..... ..+.+.+++.++|++|+++|
T Consensus 80 ~~~~l~~~g~~~K~~~~PfH~Wlpday~~ap~~~s~~ls~v~~~~g~~~l~r~~~~~~--~~~~~~~~l~~~~~~s~i~g 157 (270)
T pfam00361 80 LLSLLLLVAFLVKSPQFPFHFWLPDAHEGPPPVSSLILATTLKKAGLYLLLRLSNLFS--SSNLISYILLILGILSMLLG 157 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999948624755778857998789999998999999999999998613--23789999999999999999
Q ss_pred CCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 11100002443223321001354023331048754221023455542102333035677776420011110023556542
Q gi|254780866|r 290 SLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNM 369 (499)
Q Consensus 290 ~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~ 369 (499)
++.|++|+|+||++|||||+|+||+++++..+++.+..++++|+++|++.|+++|+++|.+++++|++|++|+||+.|++
T Consensus 158 ~~~Al~Q~dlKrllAYSSis~~G~il~~~~~~~~~~~~~~~~~~i~h~~~k~~lF~~~g~i~~~~~~~~i~~l~Gl~~~~ 237 (270)
T pfam00361 158 SLGALNQTDLKKLIAYSSISHMGFVMMGILSLGSYGIIGAIIHLISHGFFSALLFLLAGLIIHRSGTRDLRNYGGLFNSM 237 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHH
T ss_conf 99998330277999999999999999999986577999999999999999999999999999875887099870969882
Q ss_pred HCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHH
Q ss_conf 02332013455553010244431122899999
Q gi|254780866|r 370 PRYAVVMMVFTMANMGLPGTSGFIGEFLVIMS 401 (499)
Q Consensus 370 P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~ 401 (499)
|.++..+.++.++++|+||++||++|++++++
T Consensus 238 P~~~~~~~i~~lsl~GiPp~~GF~~K~~i~~s 269 (270)
T pfam00361 238 PILALLLLLLLLSLMGLPPLLGFISKFLILES 269 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999877576038899999864
No 85
>MTH00094 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=455.74 Aligned_cols=349 Identities=27% Similarity=0.461 Sum_probs=305.9
Q ss_pred EEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEEC
Q ss_conf 54665225889999999999999997520112100235678999863024302654043311123431034312355312
Q gi|254780866|r 76 SYHLGVDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVW 155 (499)
Q Consensus 76 ~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~ 155 (499)
+..+..|.+|..+..++..........+. +.+.+.........-+.+.+.+.|++.+|++||.+.+|.+.+|..|
T Consensus 37 ~~~f~~d~~s~~l~il~~~~~~~~~~~s~-----~~~~~~~~~~~l~~~li~~F~s~nl~lFYiffE~sLIP~~~LI~~w 111 (409)
T MTH00094 37 GLFFFFDSFSFLLLIFMSLFILGLVLMSE-----KNYNLLILSNLLVFICVFFFVSSNLWMLYLFFELSMFPILIMILGY 111 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 48999878999999999999999999983-----3049999999999999999999899999999999999999999960
Q ss_pred CC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 34-33232100011355445567766655443210001003443210133037899998541034445540002320101
Q gi|254780866|r 156 GG-SERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPN 234 (499)
Q Consensus 156 ~~-~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~ 234 (499)
|+ +||.+|+.+.+.++..++..++..+...+...+..+.+ ...+......+..+|++|.|++|+|.|+||
T Consensus 112 G~q~eR~~A~~y~l~YTl~~SlplL~~i~~~~~~~~~~~~~---------~~~~~~~~~~l~laFlvK~Plfp~H~WLP~ 182 (409)
T MTH00094 112 GSQIEKINSSYYLIFYAAFFSFPFLFVYFKNFFFLNFVYFD---------FFLSWEMKFILSLMFMVKFPVYFLHLWLPK 182 (409)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH---------HHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
T ss_conf 98299999999999999999999999999999997423167---------899999999999999999636313123736
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHH
Q ss_conf 00022223443333232233321110000111223310000000001222221221110000244322332100135402
Q gi|254780866|r 235 AHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYV 314 (499)
Q Consensus 235 ~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i 314 (499)
||.|||+++|+++||+..|+|.|+++|+..+.. .........+++.+++++++.|++|+|+||++|||||+|||++
T Consensus 183 AHvEAP~~gSmiLAGvLlKlG~YGl~R~~~~~~----~~~~~~~~~l~l~g~v~~sl~~l~Q~DlK~liAYSSVsHMg~v 258 (409)
T MTH00094 183 AHVEAPTTASMLLAGLLLKLGTAGFLRILGSLS----FVHNNYWILLSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFL 258 (409)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 551088389999999999898999999999887----9899999999999999999999987748899998139899999
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCC
Q ss_conf 33310487542210234555421023330356777764200111100235565420233201345555301024443112
Q gi|254780866|r 315 TIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIG 394 (499)
Q Consensus 315 ~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~ 394 (499)
+.++..+++.|..|+++|+++|++.|+++|..+|.+++|+||||++++||+.+++|..+..+.+..++..|+||+.||+|
T Consensus 259 ~~gl~~~~~~g~~Gal~~mi~HGl~ss~LF~l~g~~y~r~~sR~i~~~~Gl~~~~P~~~~~~~l~~l~n~g~Pp~~~F~s 338 (409)
T MTH00094 259 LLSLVFMSMSGKLSGLLLMLAHGYTSTLMFYFIGEFYHISKSRLIYFMNSFFNSSMIFSILFSLVFLSNSGIPPSLSFFS 338 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 99999960899999899999887777799998858998236555998699787869999999999999855897450999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 289999999865999999999999999999999999972889876555
Q gi|254780866|r 395 EFLVIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQ 442 (499)
Q Consensus 395 k~~i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~ 442 (499)
|++++.+.++..++....+.++..+++.|.++.+.++.+|+...+-.+
T Consensus 339 E~lii~s~~~~~~~~~~~~~~~~~lsa~Ysl~ly~~~~~Gk~~s~~~~ 386 (409)
T MTH00094 339 EFLSISNFFSMNKFSFFFIFFYFIVSFYYSLFLITSSLMGKKFSNFNK 386 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 999999999998999999999999999999999999666877331104
No 86
>MTH00096 consensus
Probab=100.00 E-value=0 Score=438.41 Aligned_cols=369 Identities=17% Similarity=0.224 Sum_probs=310.2
Q ss_pred CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEE
Q ss_conf 85405466522588999999999999999752011210023567899986302430265404331112343103431235
Q gi|254780866|r 72 DYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVI 151 (499)
Q Consensus 72 ~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~L 151 (499)
+...++++..|.+|..|..++..++..+..||..|++++.+||+.++.++..+|.+++.|+|+++++++||..++++|.|
T Consensus 18 n~~~n~sf~~D~~Sl~F~~~v~~Is~~V~~yS~~YM~~~~~~F~~~l~lF~~sMl~LV~s~Nl~~lfigWEglGl~SylL 97 (476)
T MTH00096 18 NQFSNLSFLFSLLSLIFLISLWNIFSNILKFSKIYMKLSSTYFKILMWMFCLSMITLIVSNSWLTLFLGWEFLGITSYFL 97 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 24664688799659999999999999999999998625430799999999999999999805999999999999999998
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 53123433232100011355445567766655443210001003443210133037899998541034445540002320
Q gi|254780866|r 152 IGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTW 231 (499)
Q Consensus 152 i~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~W 231 (499)
|.+|+++++.+++.|+++.+++|+..++.|....+...++.+. ..++.++...|+||+|||.|
T Consensus 98 I~f~~~~~s~~aa~~a~l~nRiGD~~lll~~~~~~~~~~s~~~-----------------~~ll~i~a~tKSAQ~Pfh~W 160 (476)
T MTH00096 98 ILYYYNWNSLSGSKLTFMSNRIGDMFIMLSFFLFSSIKKSFYM-----------------ILMILMLGMTKSAQFPFSGW 160 (476)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHCCCCCCHHH
T ss_conf 8371988999999999999999999999999999998537999-----------------99999999753231742664
Q ss_pred CCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
Q ss_conf 10100022223443333-23223332111000011122331000000000122222122111000024432233210013
Q gi|254780866|r 232 LPNAHVQAPTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAH 310 (499)
Q Consensus 232 lP~~y~~ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~ 310 (499)
+||| +|||||+||++| ++++++|+|.++|... .+. +......+.++|.+|++.|+..|+.|+|+||++||||+||
T Consensus 161 LP~A-M~aPTPVSALvHSsTmVtAGVyLliR~~~-~~~--~~~~~~~~l~iG~lT~l~a~~~Al~q~DiKKiIAySTlSQ 236 (476)
T MTH00096 161 LPAA-MAAPTPVSALVHSSTLVTAGIYIFFKFKL-PLM--NLGFKKIMLLLFLLTMMMGSLSALLEKDLKKIIAFSTLSQ 236 (476)
T ss_pred HHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5888-37998169999888999999999999869-873--2899999999999999999999985988889999988889
Q ss_pred CCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH-HCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHH
Q ss_conf 5402333104875422102345554210233303567777642-001111002355654202332013455553010244
Q gi|254780866|r 311 MGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDR-LHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGT 389 (499)
Q Consensus 311 ~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~-~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~ 389 (499)
+|++..+++.|. ...+++|+.+|++.|+.+|+|+|.+.+. .|++|+|++||+.+..|.+ ++.++.+++.|+|.+
T Consensus 237 LG~Mm~~~glg~---~~la~fHL~tHA~FKAlLFL~aG~vIH~~~~~Qd~R~mg~l~~~~~~t--~~~i~~lsL~G~PFl 311 (476)
T MTH00096 237 LGLIMLSFYSLW---LGLMMFHLLVHAFFKSFFFIIFGMMIWSMYSQQLNKNTSSFKMLSIMT--MFYISFLNMMSFFFT 311 (476)
T ss_pred HHHHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH--HHHHHHHHHHCCCHH
T ss_conf 999999998060---999999999999999999996789997278455687633731067999--999999998166051
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 4311228999999986599999999999999999999999997288987655568788912689999999999999772
Q gi|254780866|r 390 SGFIGEFLVIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIY 468 (499)
Q Consensus 390 ~GF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~ 468 (499)
+||+||+.++|....++.+..++..+...+++.|+.|.+.....++......-. .-..........+....+..+.+
T Consensus 312 sGFySKD~Ile~~~~~~~~~~~~~~~~~~lT~~Ys~RL~y~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~fs~~~ 388 (476)
T MTH00096 312 SGFLSKEILISLSMFKKIFFFIVYIFILIFTLLYMKRLYFIFLLKKFFLLFKYK--FNNNFLYINIKYFVFFNFFSYLW 388 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 016568999999999739999999999999999999999999982110656688--44606899999999999999999
No 87
>MTH00063 ND5 NADH dehydrogenase subunit 5; Provisional
Probab=100.00 E-value=0 Score=429.75 Aligned_cols=356 Identities=19% Similarity=0.260 Sum_probs=301.0
Q ss_pred CCCEEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 888189998631348540546652258899999999999999975201121--002356789998630243026540433
Q gi|254780866|r 58 GRSSFQMIEYYHWIDYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDML 135 (499)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~ 135 (499)
+.......+.....+...++.+..|.+|..|..++..++..+..|+..|++ ++.+||+.++.++..+|.+++.|+|++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~f~fD~~Sl~f~~~V~~Is~~V~~YS~~YM~~d~~~~rF~~ll~lFv~sM~~LV~S~nll 96 (519)
T MTH00063 17 DVSFSVSLSFLSFGGCYWLINFDFDYVTFGVLLMLLICFYYALYYTFHYFGGSYASFLLNKIIVLFVLVMGILVLTGDFL 96 (519)
T ss_pred CCEEEEEEEEEEECCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 75578998988973764899986396399999999999999999988875899984289999999999999999983599
Q ss_pred CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 11123431034312355312343323210001135544556776665544321000100344321013303789999854
Q gi|254780866|r 136 LFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAF 215 (499)
Q Consensus 136 ~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll 215 (499)
.++++||..++++|.||.+++++++.+++.|.++.+++|+..++.++...+...++. .....++
T Consensus 97 ~l~lgWEglGl~SylLI~fy~~~~s~~aa~~t~l~nRiGDv~l~~~i~~~~~~~~~~----------------~~~~l~~ 160 (519)
T MTH00063 97 STLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSSS----------------FLCGLFF 160 (519)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHH
T ss_conf 999999999999999983757899999999999999999999999999999862389----------------9999999
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC
Q ss_conf 103444554000232010100022223443333-2322333211100001112233100000000012222212211100
Q gi|254780866|r 216 FCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSM 294 (499)
Q Consensus 216 ~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al 294 (499)
.++...|+||+|||.||||| ++||||+||++| ++++++|+|.++|.. +... .......+.++|.+|++.++..|+
T Consensus 161 ~l~a~tKSAQ~PF~~WLp~A-M~aPTPVSALvHSsTlVtAGVyLliR~~-~~~~--~~~~~~~l~~ig~lT~~~a~~~Al 236 (519)
T MTH00063 161 FLVVFTKSASFPFISWLLEA-MRAPTPVSSLVHSSTLVAAGVWFVMRYD-YLLG--FSWLVYFFSVCLLLTIFITGVSSL 236 (519)
T ss_pred HHHHHHHHCCCCCHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHC--CHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999872407445656787-3799918899988999999999999988-9860--679999999999999999999999
Q ss_pred EECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH-HHCCCCCCHHHHHHHHHHCCC
Q ss_conf 0024432233210013540233310487542210234555421023330356777764-200111100235565420233
Q gi|254780866|r 295 VQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYD-RLHTRDIFAYGGLVHNMPRYA 373 (499)
Q Consensus 295 ~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~-~~g~~~l~~l~Gl~~~~P~~~ 373 (499)
.|+|+||++||||.+|+|+++.+++.|. ...|++|+++|++.|+.+|+++|.+.+ ..|++|+|+++|+.+.+|++.
T Consensus 237 ~q~DlKKiIA~STlSQLG~M~~~lglG~---~~lA~fHL~~HA~FKAlLFl~aG~vIh~~~~~QDir~mg~~~~~~p~~~ 313 (519)
T MTH00063 237 FFNDLKKIVALSTCNNISWCVLYLIYGD---VILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQASNCVYSSILYGSWNL 313 (519)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHH
T ss_conf 7863889999888879999999998275---9999999999999999999855799973899515677538653125999
Q ss_pred CCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 20134555530102444311228999999986599-9999999999999999999999972889
Q gi|254780866|r 374 VVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSNT-VAVLASFGVVLSALYSLWLYRKVVFGVS 436 (499)
Q Consensus 374 ~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~~-~~~~~~~~~~ls~~~~l~~~~~~~~g~~ 436 (499)
.++.++.+++.|+|.++||+||+.++|...+.... ...+..+++.+|+.|+.|...-.+.+..
T Consensus 314 ~~~~i~~lsL~G~PFlsGFySKDlILe~~~~~~n~~~~~l~~~~~~lT~~YS~RL~~~~~~~~~ 377 (519)
T MTH00063 314 FYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVFNVVVLLLVILCVFLSYLYSFRLCLILFGVKS 377 (519)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999999998442164067755999999998479999999999999999999999999984777
No 88
>MTH00062 ND4 NADH dehydrogenase subunit 4; Provisional
Probab=100.00 E-value=0 Score=415.67 Aligned_cols=349 Identities=22% Similarity=0.347 Sum_probs=296.8
Q ss_pred EEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEEC
Q ss_conf 54665225889999999999999997520112100235678999863024302654043311123431034312355312
Q gi|254780866|r 76 SYHLGVDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVW 155 (499)
Q Consensus 76 ~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~ 155 (499)
+.-+..|.+|..++.++..+......++++..+++. ++... +........+.++|++.+|++||...+|.+.++..|
T Consensus 40 ~~~f~~D~lS~~lilLt~~i~~~~~~~~~~~~~~~~-~~~l~--l~l~~lil~F~~~nll~FYifFE~sLIP~~~lI~~w 116 (419)
T MTH00062 40 NGLFIFDSLSFYLILLVLFLGLYSQVMLVNLLSGVS-RFFLF--LSLIFAILCFCVNNSLLFWFFYELSIIPLLYLLFSE 116 (419)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 069945687889999999999999999999888899-99999--999999999999799999999999999999999880
Q ss_pred C-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 3-433232100011355445567766655443210001003443210133037899998541034445540002320101
Q gi|254780866|r 156 G-GSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPN 234 (499)
Q Consensus 156 ~-~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~ 234 (499)
| ++||.+|+++.+.++..+|..++.++..++...|+.++..... ....+...+..+..+|++|.|++|+|.|+||
T Consensus 117 G~q~eR~~A~~y~l~YTl~~SlplL~~il~l~~~~gs~~~~~~~~----~~~~~~~~~~~~~laFlVK~Pmfp~H~WLPk 192 (419)
T MTH00062 117 SPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSEWGS----GDSVSLIIYYVLSFIFFTKVPLFPFHTWLPI 192 (419)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC----CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 894899999999999999999999999999998658730997743----2047999999999999998305002215740
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHH
Q ss_conf 00022223443333232233321110000111223310000000001222221221110000244322332100135402
Q gi|254780866|r 235 AHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYV 314 (499)
Q Consensus 235 ~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i 314 (499)
||.|||+++|+++||+..|.|.|+++|+....+++....+. .+..+..+.+.+.|++|+|.||++|||||+|||++
T Consensus 193 AHvEAP~~gSmiLAGvLLKLG~YGl~R~~~~l~~~~~~~~~----~~~~~~~~~~~l~al~Q~D~K~lIAYSSVsHMg~v 268 (419)
T MTH00062 193 VHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGYFLGYL----FLCCLLSVFFLITACSELDGKRWLAFLSLSHIVVP 268 (419)
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 21218808899999999999999999999875746799999----99999999999999986309999999508889999
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCC
Q ss_conf 33310487542210234555421023330356777764200111100235565420233201345555301024443112
Q gi|254780866|r 315 TIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIG 394 (499)
Q Consensus 315 ~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~ 394 (499)
+.|+..++..|..|+++++++|++.++++|..++..|+|+|||++...||+.+.+|..+..+.+...+..|.||+.+|+|
T Consensus 269 ~~Gl~~~~~~g~~ga~~~ml~HGl~ss~LF~l~~~~Yer~~SRsl~~~kG~~~~~p~l~~~~fl~~~~nm~~PPslnf~g 348 (419)
T MTH00062 269 VLGLFVGDWSSIYLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGVGGSLSMQVIIVFGFLSLCSFPPTIQFFC 348 (419)
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
T ss_conf 99999805799999999999889989999999868872547499999815086528999999999999717999514999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 289999999865999999999999999999999999972889
Q gi|254780866|r 395 EFLVIMSVFQNSNTVAVLASFGVVLSALYSLWLYRKVVFGVS 436 (499)
Q Consensus 395 k~~i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~ 436 (499)
|..++.+...... .......-...++.|.+..+-.+..+..
T Consensus 349 Ei~l~~s~~~~~~-~~~~~~~~~ff~~~~~l~l~~~~l~~~~ 389 (419)
T MTH00062 349 EVFLVSSSSGVLV-YLLFWCIYLFFGGLVPLILLGHLLIRSE 389 (419)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_conf 9999999999999-9999999999999999999897875112
No 89
>MTH00112 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=417.54 Aligned_cols=337 Identities=18% Similarity=0.267 Sum_probs=277.8
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 35678999863024302654043311123431034312355312343323210001135544556776665544321000
Q gi|254780866|r 112 REYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKT 191 (499)
Q Consensus 112 ~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs 191 (499)
.....++.....|+...+.|+|++.+|+++|+++++.|+++..++++++.||+.||++.+.+++.++++|+.+.|..+|+
T Consensus 3 ~~~ll~~~~lilG~~~~~sS~~~~~~wvglEl~~ls~~~Li~~~~~~~s~Ea~~KYFl~~~~~S~~~L~g~~l~y~~tg~ 82 (345)
T MTH00112 3 HAKLIITTSLILGTLITISSNHWLLAWTGLEINTLAIIPLISKSHHPRAIEAATKYFLTQAAASALILFSSTTNAWNTGQ 82 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 89999999999999999999899999999999999999999869995189999999999999999999999999999838
Q ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
Q ss_conf 10034432101330378999985410344455400023201010002222344333323223332111000011122331
Q gi|254780866|r 192 SSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLAS 271 (499)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~ 271 (499)
+|+.+.... ....++..|+++|+|.+|||+|+||+|+++|.+.+.+++ +..|.+.+.+++.....
T Consensus 83 ~~i~~~~~~---------~~~~li~~~l~~Klg~~PfH~W~Pdv~~g~~~~~~~~ls-t~~Kia~~~il~~~~~~----- 147 (345)
T MTH00112 83 WDITQLTNP---------TSCTILTLALAMKLGLAPFHFWLPEVLQGSTTTTALILL-TWQKLAPLTLLLMTSNS----- 147 (345)
T ss_pred CHHHHHCCH---------HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHH-HHHHHHHHHHHHHHHCC-----
T ss_conf 067652126---------899999999999981342441099998579688999999-99999999999998222-----
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 00000000012222212211100002443223321001354023331048754221023455542102333035677776
Q gi|254780866|r 272 QYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIY 351 (499)
Q Consensus 272 ~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~ 351 (499)
.....+.+++++|+++|++.|++|+|+||++|||||+|+||+++++..++. .+++|...|.+.+..+|...
T Consensus 148 -~~~~il~~~~~lS~~vG~~~al~Q~~iKrlLAYSSIsh~G~ml~~l~~~~~----~~~~~~~~Y~i~~~~~f~~~---- 218 (345)
T MTH00112 148 -LNTTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYAPK----LTLLTFYLYIIMTTTMFLTL---- 218 (345)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH----
T ss_conf -104999999999999999999842008999999999999999999998699----99999999999999999999----
Q ss_pred HHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 42001111002355654202332013455553010244431122899999998659-99999999999999999999999
Q gi|254780866|r 352 DRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSN-TVAVLASFGVVLSALYSLWLYRK 430 (499)
Q Consensus 352 ~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~~~l~~~~~ 430 (499)
.+.++++++|++|+++++|..+.++.++.+|++|+||+.||++||.++++..+++. ++..+.+++++++..||+|+...
T Consensus 219 ~~~~~~~i~~l~~l~~~~p~~~~~~~i~llSLaGlPP~~GF~~K~~i~~~~i~~~~~~l~~i~il~S~isl~yYlRi~y~ 298 (345)
T MTH00112 219 NTTSTKTIKDMGTSWTKSPMLNATLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATTMAMLSLLSLFFYLRLAYY 298 (345)
T ss_pred HHHCCCCHHHHHCCHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99767759987282410099999999999872656521158899999999998484999999999999999999999999
Q ss_pred HHCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 972889876555--687889126899999999999997724889
Q gi|254780866|r 431 VVFGVSKCEKVQ--QLKDLSLRERCMVYPIAVLTVFFGIYPVPI 472 (499)
Q Consensus 431 ~~~g~~~~~~~~--~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~ 472 (499)
+++-.++++... +.+..+.............++.+++.|..+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~i~ 342 (345)
T MTH00112 299 STITLPPNTTNMMKKWRTKPKKNTTTAILTTLSTLLLPLTPMIL 342 (345)
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99867999998667377799962599999999999999889999
No 90
>MTH00198 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=417.61 Aligned_cols=362 Identities=17% Similarity=0.279 Sum_probs=289.1
Q ss_pred CCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-------CC--CCCCCHHHHHHHHHHHHH
Q ss_conf 100235678999863024302654043311123431034312355312343-------32--321000113554455677
Q gi|254780866|r 108 QENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS-------ER--IYAAYKFFLYTFFGSIFM 178 (499)
Q Consensus 108 ~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~-------~~--~~aa~ky~i~~~~~s~~l 178 (499)
|+..+.=+++.++...|-..++.|.||++.|...|+.+++.+.|++.++++ .+ .||+.|||+.+.++|.++
T Consensus 169 ~~~~~~~~~lvliv~l~~lllv~s~nwlsiyla~elqtl~lfil~a~~~~~~~~~~~~~~~~~EAGLKYFVLGAlSSGll 248 (596)
T MTH00198 169 ERGPGSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGESSEPRRLPSGASNTPPESGLKYWILGAMSSGFY 248 (596)
T ss_pred CCCCCCCEEHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 76888761000788642424200101899999999888899998750356554566557898552026675757777589
Q ss_pred HHHHHHHHHHHCCCCHHHHH-H-HHCC-CHH--HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66655443210001003443-2-1013-303--78999985410344455400023201010002222344333323223
Q gi|254780866|r 179 LFAIVVMCWEKKTSSIIDLY-A-MSKF-PFS--IQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLK 253 (499)
Q Consensus 179 L~g~~~l~~~~gs~~~~~~~-~-~~~~-~~~--~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k 253 (499)
|+|+.++|+.+|+.|+.... + ..+. +.. ......+++.+|+++|.+.+|||+|.||+|+++||+++++++.+ .|
T Consensus 249 LyGcSLiYGfTGst~~~~~i~s~~~~~~~~~l~~~~~G~vFI~vgLlFKlSAaPFHMWaPDVYEGaPT~VTaffA~v-PK 327 (596)
T MTH00198 249 LFGCALYFGFTGNEGMLGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAII-PK 327 (596)
T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH-HH
T ss_conf 98799840277763116678763114444221111166999999999886137522668744489867899999987-99
Q ss_pred CCCCCCC-HHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHH
Q ss_conf 3321110-000111223310000000001222221221110000244322332100135402333104875422102345
Q gi|254780866|r 254 MGGYGCI-RFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQ 332 (499)
Q Consensus 254 ~g~~~l~-r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~ 332 (499)
++.+.++ |+. .+++++...+++|+++|++.|+.|+|+||++|||||+|+||+++++..++.+|+++.++|
T Consensus 328 iA~f~~l~rl~---------~~~~ill~~sIlSmiiGai~Ai~QtnIKRLLAYSSIgHmGfiL~Gla~Gt~EGIqasliY 398 (596)
T MTH00198 328 FTVYILLTSLV---------ITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTY 398 (596)
T ss_pred HHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 99999999999---------889999999999999999999878878899987215478999999872546669999999
Q ss_pred HHHHHCCCCCCHHHHHHHHHH---------------------HCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHH
Q ss_conf 554210233303567777642---------------------00111100235565420233201345555301024443
Q gi|254780866|r 333 MLSHGLVSSALFFCVGVIYDR---------------------LHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSG 391 (499)
Q Consensus 333 ~~~h~~~k~~lFl~~g~i~~~---------------------~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~G 391 (499)
++-|.++..+.|-+.-.+.++ ...++++|++|+.|++|+++.++.+..+|++|+||+.|
T Consensus 399 liIYiiM~Lg~FaiILsL~~~g~~~~~~r~~~~g~~~~~~n~~~ie~IsDLsGLsk~nPiLA~sLaI~LFSLAGIPPLAG 478 (596)
T MTH00198 399 AVTYLVSALASFTVICTLEEFGTRATTSRKDKQGAFGSPGNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLG 478 (596)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 99999999899999998874044333323332100101235420001797652441291999999999997468971367
Q ss_pred HCCHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-C-----------------CCCCC
Q ss_conf 112289999999865--------999999999999999999999999972889876-5-----------------55687
Q gi|254780866|r 392 FIGEFLVIMSVFQNS--------NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCE-K-----------------VQQLK 445 (499)
Q Consensus 392 F~~k~~i~~~~~~~~--------~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~-~-----------------~~~~~ 445 (499)
|++||+++.++.+.+ +++.+++++.+++++.||+|+++.+||.-.++- + ..+.+
T Consensus 479 FfaKfYIL~aaIk~~~s~~l~~yYllaiiaVl~SVIs~fYYlRIVKImYFd~~~pl~~~~~~~s~il~W~~il~~~~~~~ 558 (596)
T MTH00198 479 FLGKWFILVGSIKIAFSSSLSIYYLVALFAIICTCISAFYYIRIVATIYFNFTRPLIKTKTPLSFILTWESILKGGTSEA 558 (596)
T ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 89999999999753113443306899999999887631013636668786267753334564146676898852565200
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8891268999999999999977248899999999
Q gi|254780866|r 446 DLSLRERCMVYPIAVLTVFFGIYPVPIRDTFSVP 479 (499)
Q Consensus 446 ~~~~~~~~~~~~l~~~~i~lGi~p~~~~~~~~~~ 479 (499)
+........+.+-...++++.++|++++....++
T Consensus 559 ~~~~~ksilig~t~~~IlFl~i~P~~Ll~ith~A 592 (596)
T MTH00198 559 EPGGGKSILISIYMYFILFLIICPQPLLLISYEA 592 (596)
T ss_pred CCCCCCEEEEHHHHHHHHHHHHCCCHHHHHCCCC
T ss_conf 1576633421157899999997687999850224
No 91
>MTH00200 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=413.42 Aligned_cols=307 Identities=19% Similarity=0.302 Sum_probs=263.9
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 35678999863024302654043311123431034312355312343323210001135544556776665544321000
Q gi|254780866|r 112 REYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKT 191 (499)
Q Consensus 112 ~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs 191 (499)
..+..+++....|+++.+.|+|++++|++||+++++.|.++..++++++.||+.||++++.+++.+++.|+...|..+|+
T Consensus 4 ~~~~il~l~~~~g~~~~~~s~~l~~l~v~lEl~sl~~~~Li~~~~~~~s~eaa~KYfi~~~~~S~l~L~g~~~~~~~~g~ 83 (343)
T MTH00200 4 YISPLLILSMVLGTLLILSSSHWFFIWLGLEINTLAFIPLLAWQHHPRAVEATVKYFIIQAVASALLLFGGLLNAWSSGE 83 (343)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 79999999999999999999899999999999999999999849985799999999999999999999999999999855
Q ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
Q ss_conf 10034432101330378999985410344455400023201010002222344333323223332111000011122331
Q gi|254780866|r 192 SSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLAS 271 (499)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~ 271 (499)
+|+.+... .....++.+|+++|+|++|||.|+||+|+++|++++++++. ..|++.+.+++....
T Consensus 84 ~~~~~~~~---------~l~~~lil~gl~~K~g~fPfH~Wlpdvy~~~~~~~~~lls~-~~Ki~~~~~l~~~~~------ 147 (343)
T MTH00200 84 WGISELLG---------PLSETLILLAIALKLGLAPGHFWVPDVLQGLNLITGLILST-WQKLAPLALLTQLAS------ 147 (343)
T ss_pred HHHHHHHH---------HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHH-HHHHHHHHHHHHHHH------
T ss_conf 33678988---------99999999999999740024878731743698899999999-999999999999873------
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 00000000012222212211100002443223321001354023331048754221023455542102333035677776
Q gi|254780866|r 272 QYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIY 351 (499)
Q Consensus 272 ~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~ 351 (499)
......+.+++++|+++|++.|++|+|+||++|||||+|+||++++++.++.. +.+|.+.|.+.+..+|+. .
T Consensus 148 ~~~~~~l~~l~~lS~i~G~l~al~Q~~iKrllAYSSI~~~G~il~~l~~~~~~----~~~~~~~y~~~~~~l~~~----~ 219 (343)
T MTH00200 148 ELNSNILLLLGVLSALVGGWGGLNQTQLRKLLAFSSIAHLGWLLSGIVYGGLL----GLLYFLLYVILTLSLFLL----L 219 (343)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH----H
T ss_conf 20158999999999999999998520202578653798899999999981899----999999999999999999----9
Q ss_pred HHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 42001111002355654202332013455553010244431122899999998659-99999999999999999999999
Q gi|254780866|r 352 DRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSN-TVAVLASFGVVLSALYSLWLYRK 430 (499)
Q Consensus 352 ~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~~~l~~~~~ 430 (499)
++.+++|++|++|+.+++|..+.++.++.+|++|+||+.||++||.++++..+++. +...+++++++++..||+|+...
T Consensus 220 ~~~~~~~i~~l~gl~~~~p~~a~~~~i~~LSL~GiPP~~GF~~K~~i~~~~~~~~~~~l~~i~li~S~is~~yYlRi~~~ 299 (343)
T MTH00200 220 HTLNSTKINSLSFSLGKSPLLSMLLLLTLLSLGGLPPFTGFFLKWLILQELGKQNLVIVATLLLLGSLLSLFYYLRLSYV 299 (343)
T ss_pred HHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99668719877172101299999999999998402245359999999999998273999999999999999999999999
Q ss_pred HHCCCCCCCCCC
Q ss_conf 972889876555
Q gi|254780866|r 431 VVFGVSKCEKVQ 442 (499)
Q Consensus 431 ~~~g~~~~~~~~ 442 (499)
+++..++++...
T Consensus 300 ~~~~~~~~~~~~ 311 (343)
T MTH00200 300 SLLTLSPQQIMS 311 (343)
T ss_pred HHHCCCCCCCCC
T ss_conf 998089999654
No 92
>PRK08168 NADH dehydrogenase subunit L; Provisional
Probab=100.00 E-value=0 Score=401.61 Aligned_cols=321 Identities=20% Similarity=0.258 Sum_probs=262.0
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHH
Q ss_conf 99998720355303579999999999999999999986308888189998631348540546652258899999999999
Q gi|254780866|r 17 VFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLGVDGISILLVVLTTFLT 96 (499)
Q Consensus 17 ~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iD~ls~~f~~l~~~i~ 96 (499)
............++|..++..-..+...+..++.....-....+. ...--+++|++|..|..++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~l~~~~~~~~~~~~------------~~~~~lrvD~LS~~MllLVs~Ig 81 (514)
T PRK08168 14 SAALFFLGLRLGLPRALWRAAKAASLAGFLVALFLLLFAITQAPA------------ASAPWLEVSGLGLVMAALVQLLG 81 (514)
T ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC------------CCCCEEEECHHHHHHHHHHHHHH
T ss_conf 999997257888847888999999899999999999998723766------------67850413789999999999999
Q ss_pred HHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-CCCCCCCHHHHHHHH
Q ss_conf 999975201121--00235678999863024302654043311123431034312355312343-323210001135544
Q gi|254780866|r 97 PFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS-ERIYAAYKFFLYTFF 173 (499)
Q Consensus 97 ~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~-~~~~aa~ky~i~~~~ 173 (499)
.++..||.+|++ ++.+||+.++.++.++|.+++.|+|++.+|++||.+++++|.|+.+|.++ ++.+++.|+++++++
T Consensus 82 ~vV~~YS~~YM~ge~~~~RFf~~L~lfl~aml~LVlA~NLl~L~~~WE~~gL~sy~LI~f~~er~~A~~AA~Kafl~~ri 161 (514)
T PRK08168 82 WVIGRFSHRYLQGEPGQARYVRALAGTLASVALLVTSNHLLVLVAAWIGISLALHRLLTFYPDRPRARLAAHKKFIASRL 161 (514)
T ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999979976899982659999999999999999976499999999999999999983249988899999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHCC--CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 556776665544321000100344321013--303789999854103444554000232010100022223443333232
Q gi|254780866|r 174 GSIFMLFAIVVMCWEKKTSSIIDLYAMSKF--PFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIM 251 (499)
Q Consensus 174 ~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~--~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~ 251 (499)
|+..++.|+.++|..+||+|++++.+.... .........+++.++...|+++||||.||||+ +|+||||||++|+.+
T Consensus 162 Gd~~LL~a~~ll~~~~GT~~i~~i~~~~~~~~~~~~l~~a~lLL~laA~~KSAQfPfH~WLp~A-MeaPTPVSALLHAg~ 240 (514)
T PRK08168 162 AELLLLAAAGLLYLEVGSLSLADILQQVAADGLSLSLQAAALLLALAALLKTAQLPLHGWLIQV-MEAPTPVSALLHAGV 240 (514)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH-HCCCCCHHHHHHHHH
T ss_conf 9999999999999996987399999987445676589999999999999885117373317988-658980999999999
Q ss_pred CCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHH
Q ss_conf 23332111000011122331000000000122222122111000024432233210013540233310487542210234
Q gi|254780866|r 252 LKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMF 331 (499)
Q Consensus 252 ~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~ 331 (499)
++.|+|.++|+. |++.. .+.....+.++|.+|+++|++.++.|+|+||.+||||++|||||++.+|.|. +..+++
T Consensus 241 V~AG~~LLiR~~-pl~~~-ap~a~~~l~~iG~~Tal~galval~Q~diK~~LAySTvsQmGfM~l~~GlG~---~~~Al~ 315 (514)
T PRK08168 241 VNLGGYLLLRFA-PLLAL-APPAQWLLVLVGGLTAVLAALVMLTRISIKVRLAWSTCAQMGFMLLECGLGL---YELALL 315 (514)
T ss_pred HHHHHHHHHHHH-HHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---HHHHHH
T ss_conf 999999999983-88643-8999999999999999999999998864889999999999999999987463---989999
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHC
Q ss_conf 555421023330356777764200
Q gi|254780866|r 332 QMLSHGLVSSALFFCVGVIYDRLH 355 (499)
Q Consensus 332 ~~~~h~~~k~~lFl~~g~i~~~~g 355 (499)
|+++|+++|+.+|+++|.+.++..
T Consensus 316 HlvaHa~fKA~lFL~sGsvv~~~~ 339 (514)
T PRK08168 316 HLVAHSLYKAHAFLSAGEAVEDAR 339 (514)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 999999999999976524899988
No 93
>MTH00041 ND2 NADH dehydrogenase subunit 2; Validated
Probab=100.00 E-value=0 Score=408.43 Aligned_cols=302 Identities=18% Similarity=0.301 Sum_probs=261.4
Q ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 23567899986302430265404331112343103431235531234332321000113554455677666554432100
Q gi|254780866|r 111 FREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKK 190 (499)
Q Consensus 111 ~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~g 190 (499)
++.++.++.....|+..++.|+|++++|+++|+++++.|+++..++++|+.||+.||++.+.+|+.+++.|+...|+.+|
T Consensus 1 r~~~~~ll~~~~~G~~~~~sS~~~~~~wvglEi~sls~~~Li~~~~~~~s~EAa~KYFl~qa~aS~llL~g~~l~~~~~g 80 (350)
T MTH00041 1 RNVLLFLITNVILGTIIVVSSHHWFLIWVGLELNTLSIIPILCSNFTPRNVEATIKYFLVQAFSAAILLNGALIQAWLSG 80 (350)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 92999999999999999999999999999999999999999981899428999999999999999999999999999986
Q ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CHHCCCCCCC
Q ss_conf 010034432101330378999985410344455400023201010002222344333323223332111-0000111223
Q gi|254780866|r 191 TSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGC-IRFLLPLFPL 269 (499)
Q Consensus 191 s~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l-~r~~~~l~~~ 269 (499)
++++.+.. ......++..|++.|+|++|||+|+||+|+++|...+.+++ +++|++.+.+ .|+..
T Consensus 81 s~~i~~~~---------~~~~~~li~~al~~Klgl~PfH~W~Pdv~~g~~~~~~~~ls-t~~Kiap~~ll~~~~~----- 145 (350)
T MTH00041 81 SWSINGPL---------NSLSSIIITIALGLKLGLFPCHFWFPDVIQGLNFLQGLILS-TWQKIAPLIILIYIIN----- 145 (350)
T ss_pred HHHHHHHH---------HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHHHHC-----
T ss_conf 23765477---------79999999999998538415988887685667289999999-9999999999999960-----
Q ss_pred CCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 31000000000122222122111000024432233210013540233310487542210234555421023330356777
Q gi|254780866|r 270 ASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGV 349 (499)
Q Consensus 270 ~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~ 349 (499)
......+.++|++|+++|++.|++|+|+||++|||||+|+||++++...+. ..+++|.+.|.+.++.+|+..
T Consensus 146 --~~~~~il~~l~~lS~liG~~~al~Q~~lkrlLAYSSIsh~G~ml~~~~~~~----~~~~~~~~~Y~~~~~~lf~~~-- 217 (350)
T MTH00041 146 --NLNSNILITLGILSVLIGGWGGLNQTQTRKILAFSSIAHMGWIIITSAYSL----NAGIIMFLIYIIINTSIFLIF-- 217 (350)
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH--
T ss_conf --001889999999879999999998877879999989989999999999869----999999999999999999999--
Q ss_pred HHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q ss_conf 76420011110023556542023320134555530102444311228999999986599-99999999999999999999
Q gi|254780866|r 350 IYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSNT-VAVLASFGVVLSALYSLWLY 428 (499)
Q Consensus 350 i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~~-~~~~~~~~~~ls~~~~l~~~ 428 (499)
...++++++|++|+.+++|..+.++.++.+|++|+||+.||++||+++++..+++.+ .+.+++++++++..||+|..
T Consensus 218 --~~~~~~~i~~l~gl~~~~p~~~~~~~i~lLSLaGlPPl~GF~~K~lil~~li~~~~~~la~i~il~Slisl~yYLRl~ 295 (350)
T MTH00041 218 --NEFNISTLSHLNRLSYLNPISAATLILVILSLGGLPPLTGFLNKFISLNCLIQNNSILLSIILIIGSLLSLFFYLRIS 295 (350)
T ss_pred --HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf --883106099998499986999999999999987051576699999999999980839999999999999999999999
Q ss_pred HHHHCCCCC
Q ss_conf 999728898
Q gi|254780866|r 429 RKVVFGVSK 437 (499)
Q Consensus 429 ~~~~~g~~~ 437 (499)
.....-.++
T Consensus 296 y~~~l~~~p 304 (350)
T MTH00041 296 FNSSLILFP 304 (350)
T ss_pred HHHHHHCCC
T ss_conf 999986899
No 94
>MTH00070 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=401.20 Aligned_cols=337 Identities=19% Similarity=0.287 Sum_probs=272.5
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 35678999863024302654043311123431034312355312343323210001135544556776665544321000
Q gi|254780866|r 112 REYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKT 191 (499)
Q Consensus 112 ~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs 191 (499)
..++.++.....|+.....|+|++.+|+++|+++++.++++..++++++.||+.||++.+.++|.+++.|+...|..+|+
T Consensus 4 ~~l~l~l~~l~lg~~l~~sS~~w~~~wvglEi~~l~~~~Li~~~~~~~s~Eaa~KYfliq~~~S~~~L~g~~~~~~~~g~ 83 (346)
T MTH00070 4 YALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQAAASALILFSSTINAWFTGE 83 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999999999999999999999999999758999489999999999999999999999999999971
Q ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
Q ss_conf 10034432101330378999985410344455400023201010002222344333323223332111000011122331
Q gi|254780866|r 192 SSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLAS 271 (499)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~ 271 (499)
+|+.+.... ....++.+|++.|.|.+|||.|+||+|+++|.+.+.+++. ..|++.+.++.....
T Consensus 84 ~~~~~~~~~---------~~~~li~i~l~~Klg~~PfH~W~Pdv~~g~~~~~~~~lst-~~Kiap~~~l~~~~~------ 147 (346)
T MTH00070 84 WTIMNMQTP---------LPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILST-WQKLAPMALLIQISQ------ 147 (346)
T ss_pred HHHHHHHHH---------HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH-HHHHHHHHHHHHHHH------
T ss_conf 777788779---------9999999999998464824510999986544999999999-999989999999998------
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 00000000012222212211100002443223321001354023331048754221023455542102333035677776
Q gi|254780866|r 272 QYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIY 351 (499)
Q Consensus 272 ~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~ 351 (499)
....+.+.+++++|+++|++.|++|+|+||++|||||+|+||+++++..+.+ ..++|.+.|.+.+..+|+....
T Consensus 148 ~~~~~~l~~~~~lS~iiG~i~al~Q~~iKrlLAYSSI~h~G~ml~~l~~~~~----~~~~y~~~Y~~~~~~lf~~~~~-- 221 (346)
T MTH00070 148 SLNSNLLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMILILTFSPH----LTLLNLLIYLIMTSSMFLMLMN-- 221 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH--
T ss_conf 8769999999999999999876511542078876589788999999998589----9999999999999999999999--
Q ss_pred HHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 42001111002355654202332013455553010244431122899999998659-99999999999999999999999
Q gi|254780866|r 352 DRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSN-TVAVLASFGVVLSALYSLWLYRK 430 (499)
Q Consensus 352 ~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~~~l~~~~~ 430 (499)
.++++++|++|+.+++|..+..+.+..+|++|+||+.||++||.++++..+++. ++..+++++++++..||+|+...
T Consensus 222 --~~~~~i~~l~~l~~~~p~~~~~~~i~llSLaGlPP~~GF~~K~~ii~~~i~~~~~~l~~ilil~S~isl~yYLRi~~~ 299 (346)
T MTH00070 222 --LNSTNINKLSTSWSKNPTLTSMMMLTLLSLGGLPPTTGFMPKWLILQELTKQNLTILATIMALSALLSLFFYLRLSYA 299 (346)
T ss_pred --HCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf --737869988462642299999999999998632176789999999999998484999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 972889876555687--889126899999999999997724889
Q gi|254780866|r 431 VVFGVSKCEKVQQLK--DLSLRERCMVYPIAVLTVFFGIYPVPI 472 (499)
Q Consensus 431 ~~~g~~~~~~~~~~~--~~~~~~~~~~~~l~~~~i~lGi~p~~~ 472 (499)
+++..+++++..+.+ .....+.............+++.|..+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 343 (346)
T MTH00070 300 MSLTTSPNTSNSKLMWRFKNKTPNLLSLTIILSTMLLPITPTIL 343 (346)
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99857999998767247699964489999999999998869999
No 95
>MTH00105 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=400.76 Aligned_cols=337 Identities=17% Similarity=0.273 Sum_probs=266.5
Q ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 23567899986302430265404331112343103431235531234332321000113554455677666554432100
Q gi|254780866|r 111 FREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKK 190 (499)
Q Consensus 111 ~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~g 190 (499)
+.++..++.....|+..++.|+|++.+|+++|+++++.++++..++++++.||+.||++.+.+++.+++.|+...|..+|
T Consensus 3 ~~~~ll~l~~~~~G~l~~~sS~n~~~l~v~lEl~~ls~~~l~~~~~~~~s~eaa~KYfli~~~~S~i~L~gi~~~~~~~g 82 (345)
T MTH00105 3 PLILIIILSTLILGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMYSG 82 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 69999999999999999999988999999999999999999982899428999999999999999999999999999983
Q ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC
Q ss_conf 01003443210133037899998541034445540002320101000222234433332322333211100001112233
Q gi|254780866|r 191 TSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLA 270 (499)
Q Consensus 191 s~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~ 270 (499)
++++.+..+. ....++.+|++.|+|.+|||+|+||+|+++|...+.+++ ...|.+.+.++... .+.
T Consensus 83 ~~~~~~~~~~---------~~~~li~~~l~~Klg~~PfH~WlPdv~~~~~~~~~~~l~-t~~Kia~l~il~~~---~~~- 148 (345)
T MTH00105 83 QWTITKITNP---------LASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGLILL-TWQKLAPLSILYQI---SPS- 148 (345)
T ss_pred CHHHHHHHHH---------HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH---HHH-
T ss_conf 7578898779---------999999999999980341487798999714799999999-99999999999999---987-
Q ss_pred CCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 10000000001222221221110000244322332100135402333104875422102345554210233303567777
Q gi|254780866|r 271 SQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVI 350 (499)
Q Consensus 271 ~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i 350 (499)
.....+..++++|+++|++.|++|+|+||++|||||+|+||++.++..++ ...++|.+.|.+.+..+|...
T Consensus 149 --~~~~il~~~~~lS~i~G~~~al~Q~~lKrlLAYSSIsh~G~ml~~l~~~~----~~~~~y~~~Y~~~~~~lf~~~--- 219 (345)
T MTH00105 149 --INPNLLLTMAILSILVGGWGGLNQTQLRKILAYSSIAHMGWMTAILTYNP----TLTLLNLTIYIIMTLTMFMLL--- 219 (345)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH---
T ss_conf --30999999999999999999986601318999999988999999999849----999999999999999999999---
Q ss_pred HHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 642001111002355654202332013455553010244431122899999998659-9999999999999999999999
Q gi|254780866|r 351 YDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSN-TVAVLASFGVVLSALYSLWLYR 429 (499)
Q Consensus 351 ~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~~~l~~~~ 429 (499)
...+++++++++|+.+++|..+.++.+..+|++|+||+.||++||++++++.+++. ++..+.+++++++..||+|+..
T Consensus 220 -~~~~~~~i~~l~gl~~~~p~~~~~~~i~llSLaGiPP~~GF~~K~~ii~~~i~~~~~~l~~ilil~S~isl~yYlRii~ 298 (345)
T MTH00105 220 -MLNSSTTTLSLSHTWNKTPLMTSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIIMPTLMAITALLNLYFYMRLIY 298 (345)
T ss_pred -HHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -9957662998857553139999999999999853226568999999999999818499999999999999999999999
Q ss_pred HHHCCCCCCCC--CCCCCCCCCCHHHHHHHHHH-HHHHHHHHHHH
Q ss_conf 99728898765--55687889126899999999-99999772488
Q gi|254780866|r 430 KVVFGVSKCEK--VQQLKDLSLRERCMVYPIAV-LTVFFGIYPVP 471 (499)
Q Consensus 430 ~~~~g~~~~~~--~~~~~~~~~~~~~~~~~l~~-~~i~lGi~p~~ 471 (499)
..+....+.+. ..+.++.+.....++..+.. -.+.+++.|..
T Consensus 299 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~ 343 (345)
T MTH00105 299 STSLTMFPSTNNMKMKWQFENTKPTTLLPTLIILSTMLLPLTPML 343 (345)
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999967999997646117468984189999999999998772663
No 96
>MTH00011 ND2 NADH dehydrogenase subunit 2; Validated
Probab=100.00 E-value=0 Score=395.89 Aligned_cols=327 Identities=18% Similarity=0.267 Sum_probs=271.3
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 35678999863024302654043311123431034312355312343323210001135544556776665544321000
Q gi|254780866|r 112 REYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKT 191 (499)
Q Consensus 112 ~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs 191 (499)
.++..+++....|++..+.|+|++.+|+++|+++++.|+++..++++++.||+.||++.+.+++.+++.|....+...+.
T Consensus 6 P~~~lf~~~li~g~l~~isS~~~~~lwvglEl~~l~~~~Li~~~~~~~s~eaa~KYFl~qs~~S~~~L~g~~~~~~~~~~ 85 (333)
T MTH00011 6 PTMLLFFSTLTMGTLMALSSNNWLFLWMGMELNLLSFVPLIASSQMNQETEAAVKYFLAQALGSGLLLMSSVMSMMWSSS 85 (333)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999999899999999999999999999859995089999999999999999999999999998888
Q ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
Q ss_conf 10034432101330378999985410344455400023201010002222344333323223332111000011122331
Q gi|254780866|r 192 SSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLAS 271 (499)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~ 271 (499)
.. .......++++|++.|.|.+|||+|+||+|+++|.+.+.+++. ..|++.+.+++...+
T Consensus 86 ~~-------------~~~~~~~li~~~l~~Klg~~PfH~W~pdv~~~~~~~~~~~lst-~~Ki~~l~~l~~~~~------ 145 (333)
T MTH00011 86 SL-------------MKNTTALMLLLSILLKLGSAPCHFWYPSVMSSISWLSCLILST-WQKLAPLSILNFITP------ 145 (333)
T ss_pred HH-------------HHHHHHHHHHHHHHHHHHCCCHHHCHHHHHCCCCHHHHHHHHH-HHHHHHHHHHHHHHH------
T ss_conf 88-------------7789999999999999800212203388873797899999999-999989999999974------
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 00000000012222212211100002443223321001354023331048754221023455542102333035677776
Q gi|254780866|r 272 QYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIY 351 (499)
Q Consensus 272 ~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~ 351 (499)
....+++..++.+|+++|++.|++|+|+||++|||||+|+||++.+....+ ..+..+|...|.+.+..+|...+...
T Consensus 146 ~~~~~~~~~~~~lS~lvG~i~al~Q~~lKrllAYSSI~h~G~~l~~~~~~~---~~~~~~y~~~y~~~~~~lf~~~~~~~ 222 (333)
T MTH00011 146 HNITAYILSMAAMNALVGGLGGMNQTQLRALMAYSSIGHLGWMMSMAIVFK---PSIFIIYFMVYCIITSPLMLMMFYLS 222 (333)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 206999999999999999875443023009999999999999999999856---99999999999999999999999998
Q ss_pred HHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 420011110023556542023320134555530102444311228999999986599-9999999999999999999999
Q gi|254780866|r 352 DRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSNT-VAVLASFGVVLSALYSLWLYRK 430 (499)
Q Consensus 352 ~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~~-~~~~~~~~~~ls~~~~l~~~~~ 430 (499)
.++.++.+|+.+++|..+..+.+..+|++|+||+.||++||++++++.+++.+ +..+++++++++..||+|+...
T Consensus 223 ----~~~~~~~~~l~~~~~~~~~~~~i~llSLaGiPP~~GF~~K~~i~~~~~~~g~~~l~~~lil~S~isl~yYlRi~~~ 298 (333)
T MTH00011 223 ----SFNSKFNSKLSSMSYITFMSLMILLFSLGGLPPFTGFLPKWMIINSLTSSEMSLILLTLITGSLMNLFYYLSIIFN 298 (333)
T ss_pred ----HCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ----6429999839888599999999999876213101218899999999998783999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 972889876555687889126899999999999997724
Q gi|254780866|r 431 VVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYP 469 (499)
Q Consensus 431 ~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p 469 (499)
+++.++++++.+ .++++.......++.++.+|++|
T Consensus 299 ~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~g~~p 333 (333)
T MTH00011 299 FITMMPTCSNLT----SAPTPGANLILTSICTLTLGLAP 333 (333)
T ss_pred HHHCCCCCCCCC----CCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 981799999888----89842699999999999970899
No 97
>PRK08601 NADH dehydrogenase subunit 5; Validated
Probab=100.00 E-value=0 Score=387.40 Aligned_cols=332 Identities=20% Similarity=0.262 Sum_probs=267.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEE
Q ss_conf 83078999999999999998720355303579999999999999999999986308888189998631348540546652
Q gi|254780866|r 2 NLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLGV 81 (499)
Q Consensus 2 ~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 81 (499)
|-.++..+.++++..+.+.-+.-...+..-+...+.+.+..+..+.++..+....+ .. ....+++
T Consensus 3 ~~~~~~~l~~~~l~~~~~s~ll~l~~r~p~~yv~~h~~~~~lp~~v~l~~li~~~~--~~-------------~~g~F~l 67 (506)
T PRK08601 3 SSSLLLTLFFIALIIALLSGLLFLNPRMPLRYVKIHIYILALPVLVALIGLIGING--QH-------------VVGPWHL 67 (506)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--CE-------------EEECEEE
T ss_conf 05899999999999999988898364250899999999999999999999982688--64-------------6525337
Q ss_pred EHHHHHHHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-
Q ss_conf 25889999999999999997520112--100235678999863024302654043311123431034312355312343-
Q gi|254780866|r 82 DGISILLVVLTTFLTPFCILSSWKSI--QENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS- 158 (499)
Q Consensus 82 D~ls~~f~~l~~~i~~l~~~ys~~~~--~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~- 158 (499)
|++|..+..+++.+++++..||.+|+ |++.+||+.+++++.++|.++++|+|++.+|++||.+++++|.|+++|+++
T Consensus 68 D~LS~lM~llVt~VG~lI~~YS~~YM~GD~~y~RFFa~L~LF~~aMLlLVLSdNLllLfvgWE~vgL~SylLIgf~~~~~ 147 (506)
T PRK08601 68 DTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFPLFTFTTGFASLAWLSGDLRLMALCWGATLIGLTLLIGLNKFWK 147 (506)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf 69899999999999999999989973899982369999999999999999958699999999999999999977587756
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC---CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 32321000113554455677666554432100010034432101---330378999985410344455400023201010
Q gi|254780866|r 159 ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSK---FPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNA 235 (499)
Q Consensus 159 ~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~---~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~ 235 (499)
++.+|+.|.++.+++|+..++.|+..++..+|+++++++....+ .+........+++++|...|++|+|||.||||+
T Consensus 148 ~a~~AA~kaflv~rvGdv~Lllai~lL~~~~Gt~~~~~il~~~~~~~~~~~~~~~i~lLL~~~a~~KsAQ~P~h~WLp~a 227 (506)
T PRK08601 148 VPREAAKISGMLFLISWLALLGAIVWLFIATGEWQLTSVLTNENLALLGTWEKTGINLLLILAVMIPAAQWPFHRWLIES 227 (506)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 68999999999997999999999999999938621999870003321473368999999999999884117534555787
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHH
Q ss_conf 00222234433332322333211100001112233100000000012222212211100002443223321001354023
Q gi|254780866|r 236 HVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVT 315 (499)
Q Consensus 236 y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~ 315 (499)
+|+|||+||++++.++++|+|.+.|+. |++. .+.....+.++|.+|+++|+..++.|+|+||.+||||++|+|||+
T Consensus 228 -m~~PTPVSAl~HA~mV~AGv~ll~R~~-pl~~--~~~~~~~l~~ig~~T~l~~a~~al~q~DiK~~lAyST~sQlG~M~ 303 (506)
T PRK08601 228 -AVAPTPVSAIMHAGIVNAGGVMLTRFS-PLFH--DDIAQSILLIFSSISVLIGTGISLVQVDYKRQLVGSTMAQMGFML 303 (506)
T ss_pred -HCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -668980999999999998899999988-9860--269999999999999999999999887788999999999999999
Q ss_pred HHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC
Q ss_conf 3310487542210234555421023330356777764200
Q gi|254780866|r 316 IGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLH 355 (499)
Q Consensus 316 ~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g 355 (499)
++++.|. +..+++|+++|+++|+.+|+++|.+.+|.+
T Consensus 304 ~~~GlG~---~~~A~fHL~~Ha~FKA~LFL~aGSVVh~~~ 340 (506)
T PRK08601 304 VQCALGA---YSAAIIHLILHGLFKATLFLQSGSIVKRFN 340 (506)
T ss_pred HHHHHCC---HHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 9998071---989999999999999999953778656899
No 98
>MTH00135 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=391.42 Aligned_cols=333 Identities=19% Similarity=0.279 Sum_probs=265.0
Q ss_pred HHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf 78999863024302654043311123431034312355312343323210001135544556776665544321000100
Q gi|254780866|r 115 MIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSI 194 (499)
Q Consensus 115 ~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~ 194 (499)
..++.....|....+.|+|++..|+++|+++++.++++..++++++.||+.||++.+.++|.++++|....|+.+|++|+
T Consensus 7 ~~ll~~l~lgt~i~~sS~~w~~~w~gLEln~ls~ipLi~~~~~~~s~Eaa~KYFliqa~aS~~lL~~~~~~~~~tg~~~i 86 (347)
T MTH00135 7 TILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDI 86 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999889999999999999999998779998389999999999999999999999999999982688
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC
Q ss_conf 34432101330378999985410344455400023201010002222344333323223332111000011122331000
Q gi|254780866|r 195 IDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYF 274 (499)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~ 274 (499)
.+.... ....++.+|++.|.|.+|||+|+||+|+++|.+.+.+++ +..|++.+.++....+ ..
T Consensus 87 ~~~~~~---------~~~~li~~~l~~Klg~aPfH~W~Pdv~~g~~~~~~~~l~-t~qKiap~~ll~~~~~-------~~ 149 (347)
T MTH00135 87 QQLSHP---------LATTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILS-TWQKLAPFALILQIAP-------TN 149 (347)
T ss_pred HHHHHH---------HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH-HHHHHHHHHHHHHHHH-------CC
T ss_conf 877659---------999999999999980340886499998389789999999-9999999999999851-------00
Q ss_pred CCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 00000012222212211100002443223321001354023331048754221023455542102333035677776420
Q gi|254780866|r 275 APVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRL 354 (499)
Q Consensus 275 ~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~ 354 (499)
...+..+|+.|+++|++.|++|+|+||++|||||+|+||+++++..+.. ..++|.+.|.+.+..+|+. .+..
T Consensus 150 ~~~l~~l~~lS~~vG~~~al~Q~~lkrlLAYSSIsh~Gwml~~l~~~~~----~~~~~~~~Y~~~~~~~f~~----~~~~ 221 (347)
T MTH00135 150 PTLLITLGLLSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPS----LTLLALLTYIIMTSSAFLT----FKLN 221 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH----HHHH
T ss_conf 9999999999999999987643416799999988889999999997378----9999999999999999999----9983
Q ss_pred CCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 01111002355654202332013455553010244431122899999998659-99999999999999999999999972
Q gi|254780866|r 355 HTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSN-TVAVLASFGVVLSALYSLWLYRKVVF 433 (499)
Q Consensus 355 g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~~~l~~~~~~~~ 433 (499)
++++++|++|+++++|..+..+.+..+|++|+||+.||++||+++++..+++. +...+.+++++++..||+|+...+++
T Consensus 222 ~~~~i~~l~~~~~~~p~~~~~~~i~llSLaGlPP~~GF~~K~~il~~li~~~~~~la~i~il~SlislfyYlRi~y~~~~ 301 (347)
T MTH00135 222 SSTKINTLATSWTKAPALTALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLCYAMTL 301 (347)
T ss_pred CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 73589887561420199999999999998532166689999999999998284999999999999999999999999997
Q ss_pred CCCCCCCC--CCCCCCCCCHHHHHHHHH-HHHHHHHHHHHHH
Q ss_conf 88987655--568788912689999999-9999997724889
Q gi|254780866|r 434 GVSKCEKV--QQLKDLSLRERCMVYPIA-VLTVFFGIYPVPI 472 (499)
Q Consensus 434 g~~~~~~~--~~~~~~~~~~~~~~~~l~-~~~i~lGi~p~~~ 472 (499)
..+++... .+.+..+.........+. .-...+.+.|..+
T Consensus 302 ~~~p~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~lp~~p~~~ 343 (347)
T MTH00135 302 TISPNTLNGTTPWRLQSTQLTLPLAISTTATLMLLPLTPAIL 343 (347)
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 189999887888688999862789999999999987889999
No 99
>MTH00144 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=390.16 Aligned_cols=297 Identities=20% Similarity=0.323 Sum_probs=255.4
Q ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 02356789998630243026540433111234310343123553123433232100011355445567766655443210
Q gi|254780866|r 110 NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEK 189 (499)
Q Consensus 110 ~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~ 189 (499)
-..++..++++...|+.+++.|+|++++|+++|++++++|+++..++++++.||+.||++.+.+|+.+++.|+.+.|..+
T Consensus 4 ~~p~~~~f~~l~~~g~~~~~ss~~~~~l~v~lEl~sl~~~~Li~~~~~~~s~eaa~KYfl~~~~~S~~~L~gi~l~y~~~ 83 (329)
T MTH00144 4 MSPSNLLFLFVMLMGTLLSLSSSHWLGVWVGLELNLIGFLPLLNIKGKSSEKESSMKYFIIQSLGSSLLIMGSVIMYNMS 83 (329)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88799999999999999999998999999999999999999997599963899999999999999999999999999988
Q ss_pred CCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC
Q ss_conf 00100344321013303789999854103444554000232010100022223443333232233321110000111223
Q gi|254780866|r 190 KTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPL 269 (499)
Q Consensus 190 gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~ 269 (499)
|+.++ ...++..|++.|+|.+|||+|+||+|+++|.+...+++++ +|++.+.+++....
T Consensus 84 g~~~~----------------~~~li~~gl~~Klg~~PfH~Wlpdv~~~~~~~~~~~l~t~-~Ki~~~~~l~~~~~---- 142 (329)
T MTH00144 84 FSSSF----------------FSLLLLSGLVLKLGGFPFHFWVPSVTKGLSWLSLFLMLTW-QKVAPLFLLSLILD---- 142 (329)
T ss_pred HCHHH----------------HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHHHHHHHHH----
T ss_conf 56699----------------9999999999987544176407889814879999999999-99999999999961----
Q ss_pred CCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 31000000000122222122111000024432233210013540233310487542210234555421023330356777
Q gi|254780866|r 270 ASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGV 349 (499)
Q Consensus 270 ~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~ 349 (499)
.....+.+..++++|+++|++.|++|+|+||++|||||+|+||+++++..+. ....+|.+.|.+.+..+|...
T Consensus 143 -~~~~~~~l~~l~~lS~iiG~l~al~q~~iKrlLAYSSI~~~G~ml~~i~~~~----~~~~~y~~~y~~~~~~l~~~~-- 215 (329)
T MTH00144 143 -LNLLLMSLMVISVLSAIVGSIGGLNQTSVRLMLAYSSISHLGWMLSGILIGS----SLMWGYFLIYSLSLGFLFYSL-- 215 (329)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH--
T ss_conf -2107999999999999999999874421327889868988999999999869----999999999999999999999--
Q ss_pred HHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7642001111002355654202332013455553010244431122899999998659-999999999999999999999
Q gi|254780866|r 350 IYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSN-TVAVLASFGVVLSALYSLWLY 428 (499)
Q Consensus 350 i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~~~l~~~ 428 (499)
+++|.++++|+.+++|..+..+.++.+|++|+||++||++||.++++..+++. +..++.+++++++..||+|+.
T Consensus 216 -----~~~~~~~~~~~~~~~~~~~~~~~i~~lSlaGiPP~~GF~~K~~il~~~~~~~~~~l~~i~ll~S~is~~yYlri~ 290 (329)
T MTH00144 216 -----SGGDCLSMKSLTSLNPSNNLSISLLLLSLGGLPPFLGFLSKLLVLLSSMEMNMILLIVALILGSLISLYFYLNFF 290 (329)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -----987999998798871999999999999998654787799999999999985859999999999999999999999
Q ss_pred HHHHCCCCCCC
Q ss_conf 99972889876
Q gi|254780866|r 429 RKVVFGVSKCE 439 (499)
Q Consensus 429 ~~~~~g~~~~~ 439 (499)
..++...++..
T Consensus 291 ~~~~~~~~~~~ 301 (329)
T MTH00144 291 YSLVIKSYFLS 301 (329)
T ss_pred HHHHHHCCCCC
T ss_conf 99998679999
No 100
>MTH00160 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=374.86 Aligned_cols=327 Identities=16% Similarity=0.227 Sum_probs=266.7
Q ss_pred HHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 67899986302430265404331112343103431235531234332321000113554455677666554432100010
Q gi|254780866|r 114 YMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSS 193 (499)
Q Consensus 114 f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~ 193 (499)
...++.+...|++..+.|+|++.+|+++|+.+++.+.++..++++++.||+.||++.+.+||.+++.|+...+..+++.+
T Consensus 6 ~~i~~~~~~~g~l~~~ss~~~~~lwv~lEi~~l~~~~l~~~~~~~~s~ea~~KYfi~q~~~S~~~L~~~~~~~~~~~~~~ 85 (336)
T MTH00160 6 KILFLSTLILGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLLSSESSLKYFLIQALASSMLLFSIILMMLNSFFNN 85 (336)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999989999999999999999999984899417999999999999999999999999999987778
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
Q ss_conf 03443210133037899998541034445540002320101000222234433332322333211100001112233100
Q gi|254780866|r 194 IIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQY 273 (499)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~ 273 (499)
. ....++..|+..|.|++|||.|+||+|+++|.+.+.++++ ..|++.+.+++.. ..
T Consensus 86 ~---------------~~~~li~~~l~~Klg~~PfH~Wlpdv~~~~~~~~~~~lst-~~Ki~pl~~l~~~--------~~ 141 (336)
T MTH00160 86 S---------------FSSMMINSSLLLKLGAAPFHFWFPSVMEGLSWINCFILMT-WQKIAPLILLSYI--------IN 141 (336)
T ss_pred H---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHH--------HH
T ss_conf 9---------------9999999999999864028865999984787899999999-9999999999999--------85
Q ss_pred CCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 00000001222221221110000244322332100135402333104875422102345554210233303567777642
Q gi|254780866|r 274 FAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDR 353 (499)
Q Consensus 274 ~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~ 353 (499)
....+..++++|+++|++.|++|+|+||++|||||+|+||++.+...+...+ .+|.+.|.+. +.....+.++
T Consensus 142 ~~~~l~~~~~lS~~~G~~~al~q~~iKrllaySSI~~~G~ml~~~~~~~~~~----~~y~~~Y~~~----~~~~~~~~~~ 213 (336)
T MTH00160 142 INSFIIILIILSAIIGALGGLNQTSLRKLLAYSSINHLGWMLSAMMISENLW----LIYFLIYSII----SLSIILLFNK 213 (336)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH----HHHHHHHHHH
T ss_conf 7899999999999999998774777899999988988999999999869999----9999999999----9999999988
Q ss_pred HCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00111100235565420233201345555301024443112289999999865-99999999999999999999999997
Q gi|254780866|r 354 LHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNS-NTVAVLASFGVVLSALYSLWLYRKVV 432 (499)
Q Consensus 354 ~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~-~~~~~~~~~~~~ls~~~~l~~~~~~~ 432 (499)
.+++++++++|+.+++|..+.++.++.+|++|+||+.||++||.++++..+++ .++..+.+++++++..||+|.....+
T Consensus 214 ~~~~~~~~~~~~~~~~p~~~~~~~i~~lSL~GiPP~~GF~~K~~ii~~~~~~~~~~l~~~~il~S~is~~yYlri~~~~~ 293 (336)
T MTH00160 214 FNIFHLNQLFNSMNMSKIIKFLLFLNLLSLGGLPPFLGFFPKWIVIQFLILNNMYFLLFILIMSSLITLYFYLRISYSSF 293 (336)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 36446998865543149999999999987668851416899999999999837299999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 28898765556878891268999999999999977248899
Q gi|254780866|r 433 FGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIR 473 (499)
Q Consensus 433 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~ 473 (499)
+.++++++.+ .++.+..+..+...+..+++..++++..+.
T Consensus 294 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~i~~~~~~~~~~ 333 (336)
T MTH00160 294 MLNYSENKWN-LNKKNKSMILSLLILSFISIFGLIFISLIF 333 (336)
T ss_pred HCCCCCCCHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7589875315-640542799999999999999988899999
No 101
>MTH00197 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=100.00 E-value=0 Score=370.22 Aligned_cols=297 Identities=16% Similarity=0.229 Sum_probs=251.1
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 35678999863024302654043311123431034312355312343323210001135544556776665544321000
Q gi|254780866|r 112 REYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKT 191 (499)
Q Consensus 112 ~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs 191 (499)
.+++.+++....|+...+.|+|++.+|+++|+++++.++++..++++++.|++.||++.+.+||.+++.|+...+..+++
T Consensus 2 P~~~~~~l~~~~g~l~~vsS~n~~~~wvglEl~~l~~~~li~~~~~~~s~ea~~KYFiiq~~gS~~~L~g~~l~~~~~~~ 81 (325)
T MTH00197 2 PSSFFFYIFMVGGVLLSLSSSNWFLVWVGLEMNLICFIPLLSQAKSLSEIESAFKYFLFQEVGSYLVLVGGLLSFLPLPL 81 (325)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57999999999999999999999999999999999999999869993189999999999999999999999999999863
Q ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
Q ss_conf 10034432101330378999985410344455400023201010002222344333323223332111000011122331
Q gi|254780866|r 192 SSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLAS 271 (499)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~ 271 (499)
.+.. ...++.+|++.|+|++|||.|+||+|+++|...+.+++ +.+|++.+.+++...
T Consensus 82 ~~~~---------------~~~li~~gl~~KlG~~PfH~W~p~v~~~~~~~~~~ll~-t~~Ki~pl~il~~~~------- 138 (325)
T MTH00197 82 ETLG---------------WGALVISGLSVKLGVAPFHFWVPPVVSSVSWFNCFLLL-VWQKLAPLFILASLS------- 138 (325)
T ss_pred HHHH---------------HHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHH-HHHHHHHHHHHHHHC-------
T ss_conf 8999---------------99999999999857653010447887677199999999-999999999999954-------
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 00000000012222212211100002443223321001354023331048754221023455542102333035677776
Q gi|254780866|r 272 QYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIY 351 (499)
Q Consensus 272 ~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~ 351 (499)
.....+..++++|+++|++.|++|+|+||++|||||+|+||++++...+. ....+|.+.|.+.+..+|.. .
T Consensus 139 -~~~~~l~~~~~lS~~~G~i~al~Q~~iKrlLAYSSI~h~G~~l~~~~~~~----~~~~~y~~~Y~~~~~~~~~~----l 209 (325)
T MTH00197 139 -SSKIGLSWCGVTSVLWGAIGMMGQSNIRQILAYSSINQTGWMLSVIVYSP----SILPFYFLIYFTIMVALLLF----L 209 (325)
T ss_pred -CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH----H
T ss_conf -33689999999999998764034044029999988988999999999859----99999999999999999999----9
Q ss_pred HHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 42001111002355654202332013455553010244431122899999998659-99999999999999999999999
Q gi|254780866|r 352 DRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSN-TVAVLASFGVVLSALYSLWLYRK 430 (499)
Q Consensus 352 ~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~~~l~~~~~ 430 (499)
++.+.++.++++|+.+++|+.+..+.++.+|++|+||+.||++||.++++..+++. +..++.++++.++..||+|....
T Consensus 210 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~lSLaGiPPf~GF~~K~~ii~~~i~~~~~~l~~i~ll~S~isl~yYLrl~~~ 289 (325)
T MTH00197 210 SQMNFYASFSQKNVPDTMSWGLMLLGLSLLSLSGFPPLVGFFPKWLSVEVLLSSGSSLLTFLVMIASCFSLYAYISLGYK 289 (325)
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99877089898726653699999999999998630438669999999999998283999999999999999999999999
Q ss_pred HHCCCCCCCC
Q ss_conf 9728898765
Q gi|254780866|r 431 VVFGVSKCEK 440 (499)
Q Consensus 431 ~~~g~~~~~~ 440 (499)
++..+++...
T Consensus 290 ~~~~~~~~~~ 299 (325)
T MTH00197 290 ILNWAKNVLM 299 (325)
T ss_pred HHHCCCCCCC
T ss_conf 9980987647
No 102
>KOG4668 consensus
Probab=100.00 E-value=0 Score=272.23 Aligned_cols=313 Identities=24% Similarity=0.370 Sum_probs=251.2
Q ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 02356789998630243026540433111234310343123553123433232100011355445567766655443210
Q gi|254780866|r 110 NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEK 189 (499)
Q Consensus 110 ~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~ 189 (499)
+.++|..+++....++...+.|+|++.+|++||.+.+++|+++.+++++++.+|+.||++.++.++..++.++..++..+
T Consensus 2 ~~~~f~~~~~~~~~~~~~~~~s~~l~~~~~~~e~~~l~s~~l~~~~~~~~s~~a~~k~~l~~~~~~~~ll~~~~~~~~~~ 81 (355)
T KOG4668 2 NINEFIFYILIPTAGMLILVTSNNLITMFVGWEGVGLCSYLLLGFKKNPRSTEAAMKYFLTNRAGSFILLFGISGLYLSS 81 (355)
T ss_pred CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
T ss_conf 72245799999987675550136899999999988888898887626865568998778753665099999999999862
Q ss_pred CCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC
Q ss_conf 00100344321013303789999854103444554000232010100022223443333232233321110000111223
Q gi|254780866|r 190 KTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPL 269 (499)
Q Consensus 190 gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~ 269 (499)
|....+ +.+ ...........+...| .|.+++|||.|+||++++ |+|+++..+...+++-.-...+...+-+-.
T Consensus 82 ~~~~~~-~~~---~~~~~~~~~~~~~~~~--~ks~q~~f~~w~p~~~~g-ptpv~~~~~s~~~~v~a~~~~~v~~~~~~~ 154 (355)
T KOG4668 82 GLFGNE-IGN---NEYSSITLIILLIASG--GKSAQAPFHFWLPDAMEG-PTPVSATLSSSKTLVIAGLALAVRSIPLLC 154 (355)
T ss_pred CCCHHH-HHH---CCCCHHHHHHHHHHHH--HHHCCCCCCCCCHHHHCC-CCCHHHHHCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 642244-530---5430489999999987--653147655567687549-980666521330188999999987232000
Q ss_pred CCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 31000000000122222122111000024432233210013540233310487542210234555421023330356777
Q gi|254780866|r 270 ASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGV 349 (499)
Q Consensus 270 ~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~ 349 (499)
....++......+..++..++..+..|+|.||.+||||++|.|++...+..+.+ ..+..|...|.+.|+.+|++.|.
T Consensus 155 ~~~~i~~~~~~~~~~s~~~~~~~a~~Q~~ikk~~A~Ss~~qlg~~~~~l~~~~~---~~~~~~~~t~~~~~allf~~~gs 231 (355)
T KOG4668 155 SSPLIQQLKLILGILSMLFGALCALTQTDIKKILAFSSIGQLGYMMFSLKVGMS---NNAILHLATHALFKALLFMCYGS 231 (355)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC---CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 556899999998888889999999985107877766405776268986035553---31454022799999999835577
Q ss_pred HHHHH-CCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHH
Q ss_conf 76420-011110023556542023320134555530102444311228999999986599-9-99999999999999999
Q gi|254780866|r 350 IYDRL-HTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSNT-V-AVLASFGVVLSALYSLW 426 (499)
Q Consensus 350 i~~~~-g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~~-~-~~~~~~~~~ls~~~~l~ 426 (499)
+.+.. .+.|+++++|+.+..|.++..+.++.++++|+||+.||++|+++++.+...+.. + ..+....+.++..|+.|
T Consensus 232 Ii~~~~~~~~i~~~~~l~~~~pl~~~sl~i~~lsl~Glpfl~gf~~k~~i~e~~~~~~~~~~~~~i~~~s~~l~~~y~~~ 311 (355)
T KOG4668 232 IIHYLNLEQDIRLMSGLLNLPPLLKLSLFIGLLSLGGLPFLAGFYSKDYIIETAFQNNLYALAPTILLTSVLLTLYYSFR 311 (355)
T ss_pred HHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76034421008875051255719899999744765184404245211799998876315899999999999989899999
Q ss_pred HHHHHHC
Q ss_conf 9999972
Q gi|254780866|r 427 LYRKVVF 433 (499)
Q Consensus 427 ~~~~~~~ 433 (499)
..+++.
T Consensus 312 -~~~~~~ 317 (355)
T KOG4668 312 -TGRMFF 317 (355)
T ss_pred -HHHHCC
T ss_conf -977211
No 103
>PRK06588 putative monovalent cation/H+ antiporter subunit D; Reviewed
Probab=100.00 E-value=9e-41 Score=240.69 Aligned_cols=323 Identities=15% Similarity=0.167 Sum_probs=236.7
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 99999999999999975201121002356789998630243026540433111234310343123553123433232100
Q gi|254780866|r 86 ILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAY 165 (499)
Q Consensus 86 ~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ 165 (499)
.+...-...++....+|..+. +|+-|- ..-++-.++..+++.|+|+++++++||.|++++..++- .++.+.++++
T Consensus 25 qlia~afli~t~i~~Ly~isq--~RklE~-li~~LY~gSsIivvfAgDfISmiIswEfMai~s~liIf--s~~~~IKag~ 99 (504)
T PRK06588 25 QLIALAFLIVTAILNLYTISQ--NRKLEC-LIGSLYCLSSIICVFAADFISMIISLEFMTIFACIIIF--CDQLKIKPAR 99 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHC--CCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE--ECCCCCHHHH
T ss_conf 699999999999998986611--522799-99999997687755565799999999999988401688--2730023666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 01135544556776665544321000100344321013303789999854103444554000232010100022223443
Q gi|254780866|r 166 KFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSV 245 (499)
Q Consensus 166 ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~sa 245 (499)
||+++..+|+.++|.|+...+..+|+..+..+....++. . +...++++|+++++|..|||.|+||+|++|++..+.
T Consensus 100 RYlivHlfGggLLLaGI~l~i~~TGnlaft~lte~V~n~-e---L~~~LILiG~LINAA~pPf~aWL~DAYPeAS~SG~V 175 (504)
T PRK06588 100 QYFLTHLFSSGLILIGMTLLIQTTSNTAFTSLTESVNNF-E---LPAIFILAGCLINASAIFVNGWVVNCYPIASSSGIV 175 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCC-C---HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 645789863399998788852304850012243321243-1---259999999998037775000035657566655302
Q ss_pred CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 33323223332111000011122331000000000122222122111000024432233210013540233310487542
Q gi|254780866|r 246 FLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSG 325 (499)
Q Consensus 246 lls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~ 325 (499)
++++-.+|+.+|.++|-. +. ..++.++|+..+++|.+.|+.|+|+||+++||+|+|+|||+.|+|.++|.-
T Consensus 176 FLsAFTTKtavyvLlRlF----sG-----leILi~lGi~MiiYGiIyALLENd~RRLLaYsiVsQvGfmlAaIgI~sp~i 246 (504)
T PRK06588 176 YLISFTTKVTLIIILKLF----SG-----LEILKFFGISMIIYGLVFSLIEKNLKRLICYLTVSQLGFILAAISINSPNI 246 (504)
T ss_pred HHHHHHHHHHHHHHHHHC----CC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC
T ss_conf 245788889999999975----43-----189999979999999999999876999999999987515146760599850
Q ss_pred CCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHH
Q ss_conf 21023455542102333035677776420011110023556542023320134555530102444311228999999986
Q gi|254780866|r 326 VEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQN 405 (499)
Q Consensus 326 ~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~ 405 (499)
..-.--.++-|.+.....=+--..+++.++-+|..|++. .+.+|.+-..|.+..+--.-+-|...-+-|..+-...-++
T Consensus 247 ~yli~~fif~hilyng~falyf~~ied~~~iknyqdl~~-t~~n~~ll~gfv~siliy~silpi~ssyik~~i~n~l~~n 325 (504)
T PRK06588 247 AYLITSFIFIHILYNGLFALYFTYIEDEYDIKNYQDLQN-TQINLILLIGFVISILIYTSILPISSSYIKDEIANILNEN 325 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHH-CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
T ss_conf 999999999999985188765401113335331767733-6616445688899999876301153688889998762547
Q ss_pred H-----HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5-----999999999999999999999
Q gi|254780866|r 406 S-----NTVAVLASFGVVLSALYSLWL 427 (499)
Q Consensus 406 ~-----~~~~~~~~~~~~ls~~~~l~~ 427 (499)
+ ....--..++..+...+.++.
T Consensus 326 ~~~~f~ki~tctvlf~l~~e~~~~l~~ 352 (504)
T PRK06588 326 NVMLFSKIATCTVLFGLLMESLHSLPY 352 (504)
T ss_pred CEEEEEHHHHHHHHHHHHHHHHHHHHH
T ss_conf 569862577999999999976340016
No 104
>MTH00091 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=99.31 E-value=6.8e-14 Score=93.40 Aligned_cols=229 Identities=17% Similarity=0.286 Sum_probs=138.1
Q ss_pred EEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHH
Q ss_conf 26540433111234310343123553123433232100011355445567766655443210001003443210133037
Q gi|254780866|r 128 AFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSI 207 (499)
Q Consensus 128 ~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~ 207 (499)
...++|.+..|-.||.+++--..+.. ..++.+.-..|++.|...|..++.--.. ..
T Consensus 7 ~~~~~N~~~WWs~fl~mtl~fv~L~k---~~~~~~s~~nYfv~Qe~~gl~FLl~~~~---------------------~~ 62 (273)
T MTH00091 7 NFFSLNIIVWWSVFLLMTLLFVFLNK---GMKSYSSLLNYFVWQESLGLFFLVFNLN---------------------FF 62 (273)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HH
T ss_conf 99981799999999999999999986---2306899999999999999999999999---------------------99
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCC
Q ss_conf 89999854103444554000232010100022223443333232233321110000111223310000000001222221
Q gi|254780866|r 208 QYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAII 287 (499)
Q Consensus 208 ~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~ 287 (499)
...-...|.|..|||.|.|++.++-.--....+- +.+|.. +..+ . ..........+-..+.+
T Consensus 63 -------~~~ilmmK~G~aPFHfW~~~v~~~l~~~~~~~fl-T~qKLp-~l~i--l-------~~~~~~~~~~~lif~~~ 124 (273)
T MTH00091 63 -------QFFFLMMKMGVAPFHFWVFSVTNGLSGWSLMWFL-TFQKLP-FLFV--L-------LQIMDNFFFFLLFFGII 124 (273)
T ss_pred -------HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHH-HHHH--H-------HHHHHHHHHHHHHHHHH
T ss_conf -------9999999917971898999999873588999999-998987-9999--9-------99999999999999999
Q ss_pred CCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 22111000024432233210013540233310487542210234555421023330356777764200111100235565
Q gi|254780866|r 288 YASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVH 367 (499)
Q Consensus 288 ~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~ 367 (499)
.+.+....|++.|+++++||++|.++++++........ .+|..-+.+ ..+.. +.+..+..+.+
T Consensus 125 i~~~~~~~~ks~k~ll~~SS~~sf~Wmi~~~~~S~~~~----~~yf~~Y~~---l~~~l---i~~~~~~~~~~------- 187 (273)
T MTH00091 125 LCYLQMFVLKSYKNLLIISSTESFNWMILSFFFSLKNV----FVLFLYYFF---LMFML---IPYFSSNKELN------- 187 (273)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHH---HHHHH---HHHHHCCCHHH-------
T ss_conf 99999999999999999998634889999999999999----999999999---99999---99981120278-------
Q ss_pred HHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 420233201345555301024443112289999999865999999999999999
Q gi|254780866|r 368 NMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSNTVAVLASFGVVLSA 421 (499)
Q Consensus 368 ~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~ 421 (499)
..-.-..+...|+||+.||.-|+.++.+.............+-..++.
T Consensus 188 ------~~~~e~iL~f~nlPp~~~Ff~Ki~il~~~~~~~~~~~lfll~mMfls~ 235 (273)
T MTH00091 188 ------FFNWETILVFFNLPPSVTFFIKIFSLSEIFKLDGFFLLFLLFLMFLSV 235 (273)
T ss_pred ------HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ------999999999957994543999999999999999999999999999999
No 105
>pfam10125 NADHdeh_related NADH dehydrogenase I, subunit N related protein. This family comprises a set of NADH dehydrogenase I, subunit N related proteins found in archaea. Their exact function, has not, as yet, been determined.
Probab=98.46 E-value=4.4e-07 Score=56.09 Aligned_cols=155 Identities=17% Similarity=0.210 Sum_probs=112.6
Q ss_pred EEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC------------------CCHHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 054665225889999999999999997520112------------------10023567899986302430265404331
Q gi|254780866|r 75 CSYHLGVDGISILLVVLTTFLTPFCILSSWKSI------------------QENFREYMIAFLVLESMVIGAFLSLDMLL 136 (499)
Q Consensus 75 ~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~------------------~~~~~~f~~llll~~~~~~~~~~s~dl~~ 136 (499)
.++-+...+++............+..+.-.+.. +.+.+||.+ ..+-.+..+...++|+|+
T Consensus 16 GDIV~Y~s~~~~i~F~~al~Ft~lv~ls~pE~qve~~~~~~~~k~~~V~~~e~k~rrfma--ivCGiAtagam~TgDlFn 93 (219)
T pfam10125 16 GDIVFYLSPFTMILFVVALIFTILVILSRPEKQVEIQFGTDGDKLKEVSPDELRIRRFMA--IVCGLATAGAMVTGDLFN 93 (219)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCHHHHHHHHHHH--HHHHHHHHCCEEECCHHH
T ss_conf 667776060689999999999988521488504654424665311453889999999999--998886513000130677
Q ss_pred HHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 11234310343123553123433232100011355445567766655443210001003443210133037899998541
Q gi|254780866|r 137 FYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFF 216 (499)
Q Consensus 137 l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~ 216 (499)
+-.|..+..++-..+++-.+++.-.++++.|=++.-+++..++-|..++...+||+++.++..... +.....-+++.
T Consensus 94 FtLFlaliGI~NIGIVsaVk~~~VLnaAf~YGliamiaslPLFGgAaliLa~tGTLSi~EL~~~~~---~~l~~~k~l~~ 170 (219)
T pfam10125 94 FTLFLALIGISNIGIVSAVKNEWVLNAAFNYGLIAMIATLPLFGGAALILAKTGTLSIWELSKMAG---DVLLYAKILLA 170 (219)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEHHHHHCCCC---CHHHHHHHHHH
T ss_conf 999999976112210210417899987875538999864643315787765467404998852884---23899999999
Q ss_pred CCCCCCCCCCCCCCCCCC
Q ss_conf 034445540002320101
Q gi|254780866|r 217 CSFAIKIPMFPFHTWLPN 234 (499)
Q Consensus 217 ~g~~~K~~~~PfH~WlP~ 234 (499)
+|...+.|..||..=--|
T Consensus 171 ~Gv~GE~GvAPFYaaKAE 188 (219)
T pfam10125 171 AGVIGETGVAPFYAAKAE 188 (219)
T ss_pred HHHCCCCCCCHHHHHHHH
T ss_conf 775054675515776788
No 106
>COG4078 Predicted membrane protein [Function unknown]
Probab=98.13 E-value=3.7e-06 Score=50.99 Aligned_cols=159 Identities=16% Similarity=0.144 Sum_probs=115.6
Q ss_pred CCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC---C---------------CHHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 54054665225889999999999999997520112---1---------------00235678999863024302654043
Q gi|254780866|r 73 YFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSI---Q---------------ENFREYMIAFLVLESMVIGAFLSLDM 134 (499)
Q Consensus 73 ~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~---~---------------~~~~~f~~llll~~~~~~~~~~s~dl 134 (499)
++.++-+....++............+..+...+.. + .+.||+. -..+..+..|...++|+
T Consensus 14 PfGDIV~yls~fn~i~fa~~lift~l~~ls~te~qvE~~~~~~~~k~~~V~~~E~kIrr~l--AiVcglAtaGam~TgDl 91 (221)
T COG4078 14 PFGDIVPYLSTFNMIIFAVLLIFTALPILSNTEVQVEIDHRRPRIKAKIVSPREDKIRRAL--AIVCGLATAGAMTTGDL 91 (221)
T ss_pred ECCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCHHHHHHHHH--HHHHHHHHCCCEEECCH
T ss_conf 1555453225488999999999999987468624787403675542278560699999999--99976640464443305
Q ss_pred CCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 31112343103431235531234332321000113554455677666554432100010034432101330378999985
Q gi|254780866|r 135 LLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIA 214 (499)
Q Consensus 135 ~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~l 214 (499)
|++-.|..+..++-..++.--+++...+++++|=++..+++..++-|..++...+||++..++..+...+ .....-.+
T Consensus 92 FnftLFlsL~GI~NiGivsaV~~e~vL~aafqYGLiamiAsLPLFGgAaliLastGTLSv~EL~km~~~~--~l~f~k~l 169 (221)
T COG4078 92 FNFTLFLSLLGISNIGIVSAVEDEFVLEAAFQYGLIAMIASLPLFGGAALILASTGTLSVHELMKMPKGA--TLTFGKAL 169 (221)
T ss_pred HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEHHHHHCCCCCC--EEHHHHHH
T ss_conf 7799999997622011000256899999898774899996065567513677437723688862699997--74498999
Q ss_pred HHCCCCCCCCCCCCCCCCCCC
Q ss_conf 410344455400023201010
Q gi|254780866|r 215 FFCSFAIKIPMFPFHTWLPNA 235 (499)
Q Consensus 215 l~~g~~~K~~~~PfH~WlP~~ 235 (499)
+..|...+.|..||..=--|.
T Consensus 170 l~aGv~GEtGvaPFYA~Kaem 190 (221)
T COG4078 170 LTAGVIGETGVAPFYAVKAEM 190 (221)
T ss_pred HHCCCCCCCCCCHHHHHHHHH
T ss_conf 871212446656057777998
No 107
>MTH00059 ND2 NADH dehydrogenase subunit 2; Provisional
Probab=98.01 E-value=5.8e-07 Score=55.43 Aligned_cols=252 Identities=13% Similarity=0.179 Sum_probs=149.0
Q ss_pred EEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
Q ss_conf 02654043311123431034312355312343323---210001135544556776665544321000100344321013
Q gi|254780866|r 127 GAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERI---YAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKF 203 (499)
Q Consensus 127 ~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~---~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~ 203 (499)
....++|+..+|++.|+.+++..+..-.+++.+.. ++-..|++++.++|.+++.|...--
T Consensus 20 ~~~~sdsll~FWvfLEL~~LslIP~ff~~~~~~~~~~~~sll~Yiv~sglSS~Liv~Gll~~~----------------- 82 (288)
T MTH00059 20 LCLLSDSLLGFWVFLELCGLSLIPCFFLSGNSNVLNFYSSLLSYIVMSGISSSLIVSGLLFSS----------------- 82 (288)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH-----------------
T ss_conf 999845599999999997787878997048865100235888999986011899999999874-----------------
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCC
Q ss_conf 30378999985410344455400023201010002222344333323223332111000011122331000000000122
Q gi|254780866|r 204 PFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSL 283 (499)
Q Consensus 204 ~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~ 283 (499)
.+-.++.|+..|-|+|||+.|+=++..+..- +-...-++..|..+..+=- ..... ....+.....
T Consensus 83 -------l~~f~ffGl~~KFGlFPF~~WvY~Vf~~~sW-~vi~~iSvv~K~piLf~~f----~~~~~---~~~lv~~~c~ 147 (288)
T MTH00059 83 -------LYFFFFFGFCVKFGLFPFMFWVYRVFSNSSW-VVIWLISVVMKFPVLFFSF----FLQGG---GLELVFVDCF 147 (288)
T ss_pred -------HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCE-EEEEEEHHHHHHHHHHHHH----HHHCC---CCEEEHHHHH
T ss_conf -------8999999999997011256555653027876-8887725888768988667----63058---7234428888
Q ss_pred CCCCCCCCCCCEE-CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHH
Q ss_conf 2221221110000-244322332100135402333104875422102345554210233303567777642001111002
Q gi|254780866|r 284 IAIIYASLVSMVQ-TDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAY 362 (499)
Q Consensus 284 ~t~~~g~l~al~q-~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l 362 (499)
+|.++.+..-..+ -+-+-.-++.+++...-+..+....+.+..-. .+..- .+...+.+..-..-.+.++.
T Consensus 148 ltil~c~~l~W~~S~~W~~~WcH~~lSSs~~lvv~~~~~s~~~~~~--i~~~Y-------~~Wss~~I~yls~~~~~~~~ 218 (288)
T MTH00059 148 LTILFCGFLFWFYSLSWEYVWCHISLSSSATLVVACFCLSFDLCFF--IYLYY-------FVWSSGVIIYFSSLSDSNDL 218 (288)
T ss_pred HHHHHHHHHHHEEECCHHHEEEEEEEHHHHHHHHHHHHCCHHHHHH--HHHHH-------HHHHHHEEEEEEEECCCCCC
T ss_conf 9999886766403078234666777146779999988516678899--99999-------99987406568896355456
Q ss_pred HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 355654202332013455553010244431122899999998659999999999999999999999
Q gi|254780866|r 363 GGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSNTVAVLASFGVVLSALYSLWLY 428 (499)
Q Consensus 363 ~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~ 428 (499)
++ .. +-.-..=+.+.|--...+=|...-.+...........=.+-+...-.|..|..
T Consensus 219 ~~------~~---~~~f~~lLl~~P~S~~l~YKl~v~~~I~~~s~~vll~W~iYsfsEQ~~L~k~~ 275 (288)
T MTH00059 219 KG------YG---FFGYCFLLLSTPVSFPLFYKLSVCYGIIYSSLYVLLVWVIYSFSEQFFLFKLL 275 (288)
T ss_pred CC------CE---EEEEHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 67------44---31002435424541010567877787677358999999999999999999998
No 108
>pfam00662 Oxidored_q1_N NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus. This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Probab=97.59 E-value=0.00016 Score=42.09 Aligned_cols=54 Identities=9% Similarity=0.148 Sum_probs=43.0
Q ss_pred EEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC--HHHHHHHHHH
Q ss_conf 86313485405466522588999999999999999752011210--0235678999
Q gi|254780866|r 66 EYYHWIDYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQE--NFREYMIAFL 119 (499)
Q Consensus 66 ~~~~~~~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~--~~~~f~~lll 119 (499)
++....+...++++.+|.+|..|..+++.++.++.+||.+|+++ +.+||+..+.
T Consensus 6 ~W~~~g~~~~~~~~~~D~ls~~ml~vvt~Vs~lIhiyS~~YM~~D~~~~RFf~yLs 61 (62)
T pfam00662 6 NWINSGSFNINWGFLFDSLSLIFLSVVLTVSWLVHLYSIWYMSHDPNINRFFSYLS 61 (62)
T ss_pred EEEEECCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHC
T ss_conf 98275989479998981158999999999999999996887217969216774536
No 109
>pfam01059 Oxidored_q5_N NADH-ubiquinone oxidoreductase chain 4, amino terminus.
Probab=88.10 E-value=1.4 Score=20.52 Aligned_cols=36 Identities=39% Similarity=0.677 Sum_probs=30.7
Q ss_pred CEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 405466522588999999999999999752011210
Q gi|254780866|r 74 FCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQE 109 (499)
Q Consensus 74 ~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~ 109 (499)
..++.++.|.+|.+.+.++..+..+...+|.+..+.
T Consensus 52 ~~s~~~g~D~lS~pLi~LS~Wl~pLMilASq~~~~~ 87 (110)
T pfam01059 52 NLSYFLGIDSLSYPLIILSCWLLPLMILASQKHLKN 87 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 533987431552899999999999999987988714
No 110
>COG0650 HyfC Formate hydrogenlyase subunit 4 [Energy production and conversion]
Probab=76.09 E-value=4.2 Score=17.83 Aligned_cols=74 Identities=18% Similarity=0.144 Sum_probs=38.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC-CC----HHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 34332321000113554455677666554432100010034432101-33----0378999985410344455400023
Q gi|254780866|r 156 GGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSK-FP----FSIQYWMWIAFFCSFAIKIPMFPFH 229 (499)
Q Consensus 156 ~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~-~~----~~~~~~~~~ll~~g~~~K~~~~PfH 229 (499)
|++-..-.+.|-+-....+...+..+...++..+||.|..++.+.-. ++ .-....+.+.+++....++|-.||.
T Consensus 122 Gspf~~iGasR~~~~~~~~E~~l~~~~~~~~~~~gs~~i~~i~~~~~~h~~~~~sl~~vl~aia~fi~~~~e~gk~Pfd 200 (309)
T COG0650 122 GSPFGGIGASRELTLIALVEPPLLLVLFALALVAGSTNISDIVAYQAHHGPLLFSLPLVLAAIAFFILLFIETGKLPFD 200 (309)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 9985420399999999987689999999999995688799999888626560036779999999999999990899887
No 111
>pfam00420 Oxidored_q2 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L.
Probab=64.89 E-value=1.2 Score=20.91 Aligned_cols=37 Identities=16% Similarity=0.418 Sum_probs=19.1
Q ss_pred HHHHHHCCCEEEE-ECCCCCHHHHHHHCCCCCEEEEEE
Q ss_conf 9986302430265-404331112343103431235531
Q gi|254780866|r 118 FLVLESMVIGAFL-SLDMLLFYIFFEASLIPMFVIIGV 154 (499)
Q Consensus 118 lll~~~~~~~~~~-s~dl~~l~v~~El~~l~~~~Li~~ 154 (499)
..++..|..+... ..|++...+++|++..+.+.....
T Consensus 7 ~~lf~iGl~gl~~~r~~ll~~Ll~lE~m~~~~~l~~~~ 44 (96)
T pfam00420 7 ILLFLIGLLGLLLNRKHLLSVLLCLELMMLSLFLLLVL 44 (96)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999994327999999999999999999999
No 112
>PRK05715 NADH dehydrogenase subunit K; Validated
Probab=44.07 E-value=3.1 Score=18.58 Aligned_cols=28 Identities=18% Similarity=0.282 Sum_probs=12.1
Q ss_pred HHHCCCEEEEECCCCCHHHHHHHCCCCC
Q ss_conf 6302430265404331112343103431
Q gi|254780866|r 121 LESMVIGAFLSLDMLLFYIFFEASLIPM 148 (499)
Q Consensus 121 ~~~~~~~~~~s~dl~~l~v~~El~~l~~ 148 (499)
+..|..|+...+|.+.++.+.|++..+.
T Consensus 14 F~iGl~Gvl~rRn~i~~lmsiElmLnav 41 (99)
T PRK05715 14 FCIGLVGLFLRRNAIVVLMSIELMLNAV 41 (99)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999858999999999999999
No 113
>pfam11455 DUF3018 Protein of unknown function (DUF3018). This is a bacterial family of uncharacterized proteins.
Probab=40.59 E-value=8.7 Score=16.09 Aligned_cols=16 Identities=19% Similarity=0.627 Sum_probs=13.0
Q ss_pred CCCCCCCCCCCCCCCC
Q ss_conf 5540002320101000
Q gi|254780866|r 222 KIPMFPFHTWLPNAHV 237 (499)
Q Consensus 222 K~~~~PfH~WlP~~y~ 237 (499)
..|+=|.+.|+||+..
T Consensus 14 a~GLRPvqiWVPDtr~ 29 (65)
T pfam11455 14 AAGLRPVQIWVPDTRR 29 (65)
T ss_pred HCCCCCCEEECCCCCC
T ss_conf 8699851234799998
No 114
>PRK06076 NADH dehydrogenase subunit H; Provisional
Probab=37.89 E-value=22 Score=13.90 Aligned_cols=99 Identities=12% Similarity=0.172 Sum_probs=54.2
Q ss_pred HHHHHHCCCCCEEEE-EECC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC-H----HHHH
Q ss_conf 123431034312355-3123--433232100011355445567766655443210001003443210133-0----3789
Q gi|254780866|r 138 YIFFEASLIPMFVII-GVWG--GSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFP-F----SIQY 209 (499)
Q Consensus 138 ~v~~El~~l~~~~Li-~~~~--~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~-~----~~~~ 209 (499)
....-+.+++.|.++ +-|. ++-+.-.+.|...-.---...+...+.......||+|+.++.+.-... . -...
T Consensus 118 l~~l~l~sl~~~~~~l~GwsS~s~Ys~iG~~R~~~q~isyEv~l~l~~~~~~l~~gs~~~~~i~~~q~~~~~~~~~~~~~ 197 (335)
T PRK06076 118 LFILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVMLAGSLNLSDIVNAQSGGLLSWNILPQP 197 (335)
T ss_pred HHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHH
T ss_conf 99999999899988871320699632359999999978788999999999999964887999999885220189999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99985410344455400023201010002
Q gi|254780866|r 210 WMWIAFFCSFAIKIPMFPFHTWLPNAHVQ 238 (499)
Q Consensus 210 ~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ 238 (499)
.+++..+++...|..-.||.. |++.+|
T Consensus 198 ~~~i~~~i~~lae~~R~PFD~--~EaEsE 224 (335)
T PRK06076 198 PGFVVFFIAAVAETNRHPFDL--PEAESE 224 (335)
T ss_pred HHHHHHHHHHHHHHCCCCCCC--CCCCHH
T ss_conf 999999999999838999987--756478
No 115
>COG0713 NuoK NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]
Probab=32.60 E-value=5.8 Score=17.08 Aligned_cols=81 Identities=11% Similarity=0.097 Sum_probs=39.2
Q ss_pred HHHHHCCCEEEEECCCCCHHHHHHHCCCCCEE-EEEECCCCCCCCCCCHHHHHHHHHHHHHHHH---HHHHHHHHCCCCH
Q ss_conf 98630243026540433111234310343123-5531234332321000113554455677666---5544321000100
Q gi|254780866|r 119 LVLESMVIGAFLSLDMLLFYIFFEASLIPMFV-IIGVWGGSERIYAAYKFFLYTFFGSIFMLFA---IVVMCWEKKTSSI 194 (499)
Q Consensus 119 ll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~-Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g---~~~l~~~~gs~~~ 194 (499)
.++..|..|++.++|.+.++...|++.-+.-. ++++.+.......-.-+++.-.++..=--+| +..+|..-||.|.
T Consensus 13 ~LF~IGl~Gv~~rrN~i~~LmSiElmlNAvnl~~Va~~~y~~~~~gQvfaifvitvAAaE~aVGLailv~~yR~~~ti~i 92 (100)
T COG0713 13 LLFTIGLYGLLTRRNLIVMLMSIELMLNAVNLNFVAFSSYLGDLDGQVFAIFVITVAAAEAAVGLAILVALYRRRGTINI 92 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999878999998899999999999999999999999886365415899999999999999999999999980587774
Q ss_pred HHHHH
Q ss_conf 34432
Q gi|254780866|r 195 IDLYA 199 (499)
Q Consensus 195 ~~~~~ 199 (499)
+++.+
T Consensus 93 d~l~~ 97 (100)
T COG0713 93 DDLNE 97 (100)
T ss_pred CHHHH
T ss_conf 37877
No 116
>pfam07830 PP2C_C Protein serine/threonine phosphatase 2C, C-terminal domain. Protein phosphatase 2C (PP2C) is involved in regulating cellular responses to stress in various eukaryotes. It consists of two domains: an N-terminal catalytic domain and a C-terminal domain characteristic of mammalian PP2Cs. This domain consists of three antiparallel alpha helices, one of which packs against two corresponding alpha-helices of the N-terminal domain. The C-terminal domain does not seem to play a role in catalysis, but it may provide protein substrate specificity due to the cleft that is created between it and the catalytic domain.
Probab=25.36 E-value=37 Score=12.69 Aligned_cols=28 Identities=25% Similarity=0.342 Sum_probs=22.8
Q ss_pred HHHHHHHCCCHHHHHHCCHHHHHHHHHH
Q ss_conf 3455553010244431122899999998
Q gi|254780866|r 377 MVFTMANMGLPGTSGFIGEFLVIMSVFQ 404 (499)
Q Consensus 377 ~i~~lsl~G~Pp~~GF~~k~~i~~~~~~ 404 (499)
.++.-.+-|+||-.|..+|..+++.+++
T Consensus 53 ~La~e~Ip~LPPGGGl~sK~~vIe~vy~ 80 (81)
T pfam07830 53 TLASEDIPGLPPGGGLASKRSVIEAVYN 80 (81)
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 9875578999999469999999999962
No 117
>CHL00015 ndhE NADH dehydrogenase subunit 4L
Probab=22.14 E-value=16 Score=14.62 Aligned_cols=28 Identities=18% Similarity=0.190 Sum_probs=15.4
Q ss_pred HHHHCCCEEEEECCCCCHHHHHHHCCCC
Q ss_conf 8630243026540433111234310343
Q gi|254780866|r 120 VLESMVIGAFLSLDMLLFYIFFEASLIP 147 (499)
Q Consensus 120 l~~~~~~~~~~s~dl~~l~v~~El~~l~ 147 (499)
++..|..|+...+|.+.++.+.|++.-+
T Consensus 13 LF~iGl~Gvl~rRN~i~~LmsiELmLna 40 (101)
T CHL00015 13 LFSIGIYGLITSRNMVRALMCLELILNA 40 (101)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999989998754899999999999999
No 118
>MTH00180 ND4L NADH dehydrogenase subunit 4L; Provisional
Probab=20.98 E-value=29 Score=13.21 Aligned_cols=33 Identities=15% Similarity=0.372 Sum_probs=18.3
Q ss_pred HHHHHCCCEEEEEC-CCCCHHHHHHHCCCCCEEE
Q ss_conf 98630243026540-4331112343103431235
Q gi|254780866|r 119 LVLESMVIGAFLSL-DMLLFYIFFEASLIPMFVI 151 (499)
Q Consensus 119 ll~~~~~~~~~~s~-dl~~l~v~~El~~l~~~~L 151 (499)
.++..|..|.+..+ |++.+..+.|++.++....
T Consensus 11 ~LF~iG~~Gi~lnRkNiii~LmsiELMLlavnln 44 (99)
T MTH00180 11 ILFILGVLGIVLNRSNLIIMLMSIELMLLAISFL 44 (99)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9999988887503233999999999999999999
No 119
>pfam06942 GlpM GlpM protein. This family consists of several bacterial GlpM membrane proteins. GlpM is a hydrophobic protein containing 109 amino acids. It is thought that GlpM may play a role in alginate biosynthesis in Pseudomonas aeruginosa.
Probab=20.85 E-value=32 Score=12.99 Aligned_cols=50 Identities=18% Similarity=0.259 Sum_probs=26.5
Q ss_pred CCCCCEEEEEEC--CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 034312355312--34332321000113554455677666554432100010
Q gi|254780866|r 144 SLIPMFVIIGVW--GGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSS 193 (499)
Q Consensus 144 ~~l~~~~Li~~~--~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~ 193 (499)
-..|++.||+++ +++|+.|+-.+-.+++..+-+....=..-+|..++-++
T Consensus 29 PLFPTFALIAHyIVg~Er~~eaLR~T~lFg~wsiiPY~~YL~svy~~~~~~~ 80 (107)
T pfam06942 29 PLFPTFALIAHYIVGTERSMEALRTTALFGMWSIIPYAAYLAAVYYFSYRMS 80 (107)
T ss_pred CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 1131488989864113457999999999999999999999999999999977
No 120
>PRK08389 putative monovalent cation/H+ antiporter subunit C; Reviewed
Probab=20.62 E-value=35 Score=12.76 Aligned_cols=15 Identities=7% Similarity=0.266 Sum_probs=6.8
Q ss_pred EEHHHHHHHHHHHHH
Q ss_conf 225889999999999
Q gi|254780866|r 81 VDGISILLVVLTTFL 95 (499)
Q Consensus 81 iD~ls~~f~~l~~~i 95 (499)
+|++-.-+++..-.+
T Consensus 65 ~dPlPqALvLTaIVI 79 (111)
T PRK08389 65 ADPVPQAVILTAIVI 79 (111)
T ss_pred CCCCHHHHHHHHHHH
T ss_conf 784037999999999
Done!