RPSBLAST alignment for GI: 254780866 and conserved domain: COG1008

>gnl|CDD|31212 COG1008, NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]. Length = 497
 Score =  503 bits (1296), Expect = e-143
 Identities = 249/490 (50%), Positives = 344/490 (70%), Gaps = 7/490 (1%)

Query: 1   MNLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRS 60
           ++ P LS++ FLP +G  +IL     G   R    +AL +S    + SL++++ FD    
Sbjct: 1   LSFPLLSLLIFLPLIGALLILLIPDNGKFAR---WIALVVSLATLLLSLYLFAGFDISSP 57

Query: 61  SFQMIEYYHWID-YFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFL 119
            FQ +E Y WI     SYHLGVDGIS+LLV+LT  LT   IL+SW+ I++  + +   FL
Sbjct: 58  GFQFVESYPWIPQLGLSYHLGVDGISLLLVLLTALLTLLAILASWREIEKRPKLFYALFL 117

Query: 120 VLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFML 179
           +LE  VIG F +LD+LLFY+F+E  LIPM+ +IG+WGG  RIYAA KFFLYT  GS+FML
Sbjct: 118 LLEGGVIGVFAALDLLLFYVFWELMLIPMYFLIGIWGGKRRIYAATKFFLYTLLGSLFML 177

Query: 180 FAIVVMCWE--KKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHV 237
            A + + +     T  I++L A+   P  +Q  +++ F  +FA+K+P+FP HTWLP+AHV
Sbjct: 178 LAFLYLYFLTGSPTFDILELLAL-NLPLGVQTLLFLGFLIAFAVKMPLFPLHTWLPDAHV 236

Query: 238 QAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQT 297
           +APTAGSV LAGI+LKMGGYG +RF LPLFP AS YFAP++  L +I+IIY +LV+  QT
Sbjct: 237 EAPTAGSVILAGILLKMGGYGLLRFSLPLFPDASAYFAPLLVALGVISIIYGALVAFAQT 296

Query: 298 DIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTR 357
           DIK+LIAYSSI+HMG+VT+GIFS  + GV GA+FQMLSHGL+S+ALF  VGV+Y+R HTR
Sbjct: 297 DIKRLIAYSSISHMGFVTLGIFSFNELGVSGAVFQMLSHGLISAALFLLVGVLYERTHTR 356

Query: 358 DIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSNTVAVLASFGV 417
           DI   GGL + MP+ A + M+F MA++GLPGTSGF+GEFL+++  FQ    VA LA+FG+
Sbjct: 357 DIADLGGLANKMPKLAALFMLFAMASLGLPGTSGFVGEFLILLGSFQVFPWVAFLAAFGL 416

Query: 418 VLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRDTFS 477
           +L+A+Y LW+Y++V FG  K   + +L DL+ RE  ++ P+ VL +F G+YP PI D   
Sbjct: 417 ILTAVYMLWMYQRVFFGPLKEGSLAELPDLNGREVFILAPLVVLILFLGVYPNPILDIIQ 476

Query: 478 VPLSSIIENY 487
             + +++   
Sbjct: 477 PAVVNLLSQV 486