RPSBLAST alignment for GI: 254780866 and conserved domain: COG1008
>gnl|CDD|31212 COG1008, NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]. Length = 497
Score = 503 bits (1296), Expect = e-143
Identities = 249/490 (50%), Positives = 344/490 (70%), Gaps = 7/490 (1%)
Query: 1 MNLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRS 60
++ P LS++ FLP +G +IL G R +AL +S + SL++++ FD
Sbjct: 1 LSFPLLSLLIFLPLIGALLILLIPDNGKFAR---WIALVVSLATLLLSLYLFAGFDISSP 57
Query: 61 SFQMIEYYHWID-YFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFL 119
FQ +E Y WI SYHLGVDGIS+LLV+LT LT IL+SW+ I++ + + FL
Sbjct: 58 GFQFVESYPWIPQLGLSYHLGVDGISLLLVLLTALLTLLAILASWREIEKRPKLFYALFL 117
Query: 120 VLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFML 179
+LE VIG F +LD+LLFY+F+E LIPM+ +IG+WGG RIYAA KFFLYT GS+FML
Sbjct: 118 LLEGGVIGVFAALDLLLFYVFWELMLIPMYFLIGIWGGKRRIYAATKFFLYTLLGSLFML 177
Query: 180 FAIVVMCWE--KKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHV 237
A + + + T I++L A+ P +Q +++ F +FA+K+P+FP HTWLP+AHV
Sbjct: 178 LAFLYLYFLTGSPTFDILELLAL-NLPLGVQTLLFLGFLIAFAVKMPLFPLHTWLPDAHV 236
Query: 238 QAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQT 297
+APTAGSV LAGI+LKMGGYG +RF LPLFP AS YFAP++ L +I+IIY +LV+ QT
Sbjct: 237 EAPTAGSVILAGILLKMGGYGLLRFSLPLFPDASAYFAPLLVALGVISIIYGALVAFAQT 296
Query: 298 DIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTR 357
DIK+LIAYSSI+HMG+VT+GIFS + GV GA+FQMLSHGL+S+ALF VGV+Y+R HTR
Sbjct: 297 DIKRLIAYSSISHMGFVTLGIFSFNELGVSGAVFQMLSHGLISAALFLLVGVLYERTHTR 356
Query: 358 DIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSNTVAVLASFGV 417
DI GGL + MP+ A + M+F MA++GLPGTSGF+GEFL+++ FQ VA LA+FG+
Sbjct: 357 DIADLGGLANKMPKLAALFMLFAMASLGLPGTSGFVGEFLILLGSFQVFPWVAFLAAFGL 416
Query: 418 VLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIRDTFS 477
+L+A+Y LW+Y++V FG K + +L DL+ RE ++ P+ VL +F G+YP PI D
Sbjct: 417 ILTAVYMLWMYQRVFFGPLKEGSLAELPDLNGREVFILAPLVVLILFLGVYPNPILDIIQ 476
Query: 478 VPLSSIIENY 487
+ +++
Sbjct: 477 PAVVNLLSQV 486