HHsearch alignment for GI: 254780867 and conserved domain: COG0651
>COG0651 HyfB Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion / Inorganic ion transport and metabolism].
Probab=100.00 E-value=0 Score=539.75 Aligned_cols=405 Identities=24% Similarity=0.396 Sum_probs=351.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 10031676410079999999999999999999999632100224206679999999999873146102212457778877
Q gi|254780867|r 63 GIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFAL 142 (478)
Q Consensus 63 ~~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~ 142 (478)
T Consensus 64 ~~~~gi~~~~D~ls~~f~l~~~lv~~~~~iys~~~~~~-~~~~~~~~~l~~l~~~g~~g~~~t~dlfnl~Vf~Ei~~isS 142 (504)
T COG0651 64 LAPFGIVLAADPLSAIFLLIIALVGLLASLYSIGYMRH-EKERAYYYFLLLLLLAGMLGAFLTGDLFNLYVFFEIMTLSS 142 (504)
T ss_pred CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 78710687420457999999999999999982898623-33003999999999999999999755999999999999999
Q ss_pred HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 77665320001344555554014620467998898853001000001222211101343100001222211234444432
Q gi|254780867|r 143 YVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMAL 222 (478)
Q Consensus 143 ~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~ 222 (478)
T Consensus 143 ~~Li~~~~~~~~~~~a~~~Y~i~~~~~~~l~L~gv~lly~~tGtln~~~i~~~~~~~~~~~~~~~~~~L~ligf~~Kagl 222 (504)
T COG0651 143 YFLVAHYGGRRRQASAGFKYLILGHIGTLLLLIGVGLLYAATGTLNFADIALKLSSELDPGLGIAAFLLLLIGFGVKAGL 222 (504)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999808765666457788778868999999999999997172029988755420346358999999999999996376
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC---CCCCEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1100012101221001233332100000232111112440001122---2100000122210222200000124454435
Q gi|254780867|r 223 VPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLS---GLLPIFMCVSIGSMVLGSVVAIRQKDLKRLM 299 (478)
Q Consensus 223 fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~---~~~~~l~~~g~~t~i~g~~~al~q~d~Krll 299 (478)
T Consensus 223 fPlh~WLP~A~~~ap~pvSAllS~v~~k~g~y~i~ril~~~~~~~~~~~~~~~~l~~~~~~t~i~G~~~Al~q~d~KRlL 302 (504)
T COG0651 223 FPLHFWLPDAHSEAPSPVSALLSGVLVKVGVYGILRILYLVFPLLGGAYLWGNLLIALGILTILFGVLYALLQKDIKRLL 302 (504)
T ss_pred CCHHEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 51123310120679616999998999999999999999999264000357899999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf 6421112442111111215-778888643002320100110000267874087645502104665232114789999865
Q gi|254780867|r 300 AYSSIGHAGYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLF 378 (478)
Q Consensus 300 AySsi~q~G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~l 378 (478)
T Consensus 303 AYsti~q~G~illg~~ig~~~~l~~ai~~~l~H~l~K~~LFL~aG~v~~~~g--~~~i~~~gGl~~~~P~~~~~~~i~~l 380 (504)
T COG0651 303 AYSTVSQMGYILLGLGIGTPLGLAGAIFHLLNHALVKALLFLGAGAVLYRTG--TRDLEKLGGLAKRMPLTAVAFLIGAL 380 (504)
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCHHHHCCCHHHHCHHHHHHHHHHHH
T ss_conf 9999988999999999668057999999999999999999997118999727--33197703747545399999999999
Q ss_pred HCCCCCHHHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC---CCCHHHHH
Q ss_conf 3036650000675999999999-----628499999999999999999999999996499877865567---33218999
Q gi|254780867|r 379 SLAGIPPFAGFFGKYFLLISAV-----KREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVA---KEMRLFIF 450 (478)
Q Consensus 379 sl~GlPp~~GF~sK~~i~~~~~-----~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~---~~~~~~~~ 450 (478)
T Consensus 381 sl~GlPp~~GF~sk~~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (504)
T COG0651 381 SLAGLPPFNGFISKFLLIQALFKANALLAILIILAALILLASLATFISLARIFMLLFFGQGAPIERDVPEVPLLMLAPMV 460 (504)
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHH
T ss_conf 98079850538999999998762223699999999999999999999999999998603467410155421488888799
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999976765899
Q gi|254780867|r 451 GSILFVTGYFLIENILNSSI 470 (478)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~ 470 (478)
T Consensus 461 ila~~~i~~g~~~~~~~~~~ 480 (504)
T COG0651 461 ILAILCLVLGLAPDPLLPKI 480 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999986179999988