HHsearch alignment for GI: 254780867 and conserved domain: MTH00014
>MTH00014 ND4 NADH dehydrogenase subunit 4; Validated.
Probab=100.00 E-value=0 Score=541.11 Aligned_cols=412 Identities=19% Similarity=0.217 Sum_probs=356.4
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 99999713221003167641007999999999999999999999963210022420667999999999987314610221
Q gi|254780867|r 53 LFFLLIMPYEGIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFY 132 (478)
Q Consensus 53 l~~~~~~~~~~~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~ 132 (478)
T Consensus 36 ~~~~~~~~~~~~~~~~~~~vD~lS~~l~~Ls~~i~~l~~l~S~~~~~~~~~~-~~f~~l~l~l~~~m~~~f~s~nl~~fy 114 (451)
T MTH00014 36 LIFLYMPSASISMLTESLSSDMLSFPLIILTLWITALMILASFKIFQNNKAP-KTFMTNILILNLILILCFSASNLLMFY 114 (451)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9998565432778758883467479999999999999999969998568637-899999999999999999982799999
Q ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 24577788777766532000134455555401462046799889885300100000122221110134310000122221
Q gi|254780867|r 133 MSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLI 212 (478)
Q Consensus 133 v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll 212 (478)
T Consensus 115 if~E~~lip~~~LI~~~g~~~~r~~A~~~~~iyt~~gsl~lL~~i~~ly~~~gs~~~~~~~~~~~~--~~~~~~~~~~~~ 192 (451)
T MTH00014 115 IFFEASLIPTLFLILGWGYQPERLQAGFYLMIYTVTASLPLLMSILLIFYTNNSLNMFMSNTYTPP--SIYSMNLWWLIT 192 (451)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC--CHHHHHHHHHHH
T ss_conf 999999999999999608979999999999999999999999999999986496999999986634--458999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC
Q ss_conf 12344444321100012101221001233332100000232111112440001122210000012221022220000012
Q gi|254780867|r 213 LVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQ 292 (478)
Q Consensus 213 ~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q 292 (478)
T Consensus 193 ~~aF~vK~p~~P~H~WLP~Ah~eAP~~~S~lLagvllK~G~YgliR~~~~~~~~~~~~~~~l~~i~~~~~~~~~l~al~Q 272 (451)
T MTH00014 193 ILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFMSINKSLSAPLSSISLVGAVITSLICIRQ 272 (451)
T ss_pred HHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999970687201013431075977999999999999999999999985313369999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHH
Q ss_conf 44544356421112442111111215-77888864300232010011000026787408764550210466523211478
Q gi|254780867|r 293 KDLKRLMAYSSIGHAGYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTC 371 (478)
Q Consensus 293 ~d~KrllAySsi~q~G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~ 371 (478)
T Consensus 273 ~DlKrllAYSSIshmG~i~~gi~~~~~~g~~gal~~mi~Hgl~~s~LF~~~g~i~~~~~--tr~i~~~~Gl~~~~P~~~~ 350 (451)
T MTH00014 273 PDLKSLIAYSSVGHMGLMTAGAMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTH--TRSLFLTKGLLSLFPAMTM 350 (451)
T ss_pred HCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHCCCHHHHHHHHH
T ss_conf 36683542117989999999999745899999999999999999999999999998757--7149985893400279999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CCCCCCHHH
Q ss_conf 99998653036650000675999999999628499999999999999999999999996499877865---567332189
Q gi|254780867|r 372 ALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVV---VVAKEMRLF 448 (478)
Q Consensus 372 ~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~---~~~~~~~~~ 448 (478)
T Consensus 351 ~~~i~~la~~g~Pp~~gF~sE~~i~~~~~~~~-~~~~~~~~~~~~lsa~Y~l~l~~~~~~G~~~~~~~~~~~~~~re~~~ 429 (451)
T MTH00014 351 WWFLLSAANMAAPPSINLLSEIMLLTSILSSS-TSTAILLALTSFLAAAYSLFLYTSTQHGSPPSFSNPLNLFTPRNHTL 429 (451)
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHH
T ss_conf 99999999762653361999999999999986-99999999999999999999999987799801040089984579999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999976765899
Q gi|254780867|r 449 IFGSILFVTGYFLIENILNSSI 470 (478)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~ 470 (478)
T Consensus 430 ~~~h~~pl~~l~~~p~~~~~w~ 451 (451)
T MTH00014 430 MTLHLVPLFILILKPDLITNWL 451 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999998199997149