HHsearch alignment for GI: 254780867 and conserved domain: MTH00070
>MTH00070 ND2 NADH dehydrogenase subunit 2; Provisional.
Probab=100.00 E-value=0 Score=424.53 Aligned_cols=305 Identities=28% Similarity=0.498 Sum_probs=266.2
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 42066799999999998731461022124577788777766532000134455555401462046799889885300100
Q gi|254780867|r 106 FEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTG 185 (478)
Q Consensus 106 ~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~g 185 (478)
T Consensus 4 ~~l~l~l~~l~lg~~l~~sS~~w~~~wvglEi~~l~~~~Li~~~-~~~~s~Eaa~KYfliq~~~S~~~L~g~~~~~~~~g 82 (346)
T MTH00070 4 YALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKT-HHPRATEAATKYFLTQAAASALILFSSTINAWFTG 82 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999999999999999999999999999758-99948999999999999999999999999999997
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCC
Q ss_conf 00012222111013431000012222112344444321100012101221001233332100000232111112440001
Q gi|254780867|r 186 CTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWP 265 (478)
Q Consensus 186 s~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~ 265 (478)
T Consensus 83 ~~~~~~~~~~~~-----------~~li~i~l~~Klg~~PfH~W~Pdv~~g~~~~~~~~lst~~Kiap~~~l~~~~~~~~- 150 (346)
T MTH00070 83 EWTIMNMQTPLP-----------TIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISQSLN- 150 (346)
T ss_pred HHHHHHHHHHHH-----------HHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 177778877999-----------99999999998464824510999986544999999999999989999999998876-
Q ss_pred CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHH
Q ss_conf 12221000001222102222000001244544356421112442111111215778888643002320100110000267
Q gi|254780867|r 266 MLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSL 345 (478)
Q Consensus 266 ~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~ 345 (478)
T Consensus 151 -----~~~l~~~~~lS~iiG~i~al~Q~~iKrlLAYSSI~h~G~ml~~l~~~~~---~~~~y~~~Y~~~~~~lf~~~~~~ 222 (346)
T MTH00070 151 -----SNLLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMILILTFSPH---LTLLNLLIYLIMTSSMFLMLMNL 222 (346)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -----9999999999999999876511542078876589788999999998589---99999999999999999999997
Q ss_pred HHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87408764550210466523211478999986530366500006759999999996284999999999999999999999
Q gi|254780867|r 346 RRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRV 425 (478)
Q Consensus 346 ~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~ 425 (478)
T Consensus 223 ------~~~~i~~l~~l~~~~p~~~~~~~i~llSLaGlPP~~GF~~K~~ii~~~i~~~~~~l~~ilil~S~isl~yYLRi 296 (346)
T MTH00070 223 ------NSTNINKLSTSWSKNPTLTSMMMLTLLSLGGLPPTTGFMPKWLILQELTKQNLTILATIMALSALLSLFFYLRL 296 (346)
T ss_pred ------CCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ------37869988462642299999999999998632176789999999999998484999999999999999999999
Q ss_pred HHHHHCCCCCCC
Q ss_conf 999964998778
Q gi|254780867|r 426 ISIMWFDQSTEC 437 (478)
Q Consensus 426 ~~~~f~~~~~~~ 437 (478)
T Consensus 297 ~~~~~~~~~~~~ 308 (346)
T MTH00070 297 SYAMSLTTSPNT 308 (346)
T ss_pred HHHHHHHCCCCC
T ss_conf 999998579999