HHsearch alignment for GI: 254780867 and conserved domain: MTH00091
>MTH00091 ND2 NADH dehydrogenase subunit 2; Provisional.
Probab=99.45 E-value=5.1e-14 Score=93.39 Aligned_cols=234 Identities=21% Similarity=0.318 Sum_probs=147.8
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
Q ss_conf 98731461022124577788777766532000134455555401462046799889885300100000122221110134
Q gi|254780867|r 121 CMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGH 200 (478)
Q Consensus 121 ~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~ 200 (478)
T Consensus 6 l~~~~~N~~~WWs~fl~mtl~fv~L~k---~~-~~~~s~~nYfv~Qe~~gl~FLl~~~~-~-------~----------- 62 (273)
T MTH00091 6 LNFFSLNIIVWWSVFLLMTLLFVFLNK---GM-KSYSSLLNYFVWQESLGLFFLVFNLN-F-------F----------- 62 (273)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHH---CC-HHHHHHHHHHHHHHHHHHHHHHHHHH-H-------H-----------
T ss_conf 999981799999999999999999986---23-06899999999999999999999999-9-------9-----------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
Q ss_conf 31000012222112344444321100012101221001233332100000232111112440001122210000012221
Q gi|254780867|r 201 RSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIG 280 (478)
Q Consensus 201 ~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~ 280 (478)
T Consensus 63 -----------~~~ilmmK~G~aPFHfW~~~v~~~l~~~~~~~flT~qKLp~l~il~~~~~----------~~~~~~lif 121 (273)
T MTH00091 63 -----------QFFFLMMKMGVAPFHFWVFSVTNGLSGWSLMWFLTFQKLPFLFVLLQIMD----------NFFFFLLFF 121 (273)
T ss_pred -----------HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHH
T ss_conf -----------99999999179718989999998735889999999989879999999999----------999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHC
Q ss_conf 02222000001244544356421112442111111215778888643002320100110000267874087645502104
Q gi|254780867|r 281 SMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLA 360 (478)
Q Consensus 281 t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~ 360 (478)
T Consensus 122 ~~~i~~~~~~~~ks~k~ll~~SS~~sf~Wmi~~~~~S~~---~~~~yf~~Y~~l~---~---~li~~~~~~~--~----- 185 (273)
T MTH00091 122 GIILCYLQMFVLKSYKNLLIISSTESFNWMILSFFFSLK---NVFVLFLYYFFLM---F---MLIPYFSSNK--E----- 185 (273)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH---H---HHHHHHHCCC--H-----
T ss_conf 999999999999999999999986348899999999999---9999999999999---9---9999981120--2-----
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHH--HHHHHHHHHHHHHH
Q ss_conf 665232114789999865303665000067599999999962849999--99999999999999
Q gi|254780867|r 361 GLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLA--IVALLSSVISAYYY 422 (478)
Q Consensus 361 gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~--~~~~~~s~~s~~y~ 422 (478)
T Consensus 186 --------~~~~~~e~iL~f~nlPp~~~Ff~Ki~il~~~~~~~~~~~lfll~mMfls~~~~s~~ 241 (273)
T MTH00091 186 --------LNFFNWETILVFFNLPPSVTFFIKIFSLSEIFKLDGFFLLFLLFLMFLSVLSFSFW 241 (273)
T ss_pred --------HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf --------78999999999957994543999999999999999999999999999999999999