HHsearch alignment for GI: 254780867 and conserved domain: MTH00095
>MTH00095 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00 E-value=0 Score=466.87 Aligned_cols=381 Identities=17% Similarity=0.205 Sum_probs=310.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 22100316764100799999999999999999999996321002242066799999999998731461022124577788
Q gi|254780867|r 61 YEGIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSF 140 (478)
Q Consensus 61 ~~~~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i 140 (478)
T Consensus 32 ~~~~~~s~~f~fd~~Sl~F~~~v~~Is~~V~~YS~~YM~~d~~~-~rF~~~l~lFi~SMl~LV~S~nll~l~lgWE~lGl 110 (527)
T MTH00095 32 VEWDFLSFKFNFYFNSLLFSLILLLVFFSVLVFSTYYMDGELNF-NYFYFVLLIFVGSMFLLIFSNSVFTMLLSWDLLGI 110 (527)
T ss_pred HHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 41034432200998789999999999999999989972799891-49999999999999999998029999999999999
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 77776653200013445555540146204679988988530010000012222111013431000012222112344444
Q gi|254780867|r 141 ALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKM 220 (478)
Q Consensus 141 ~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~ 220 (478)
T Consensus 111 ~SylLI~fy~~-~~s~~aa~~t~l~nRiGD~~ll~~~~~~~~~~~~~~~~~~~-----------~~~~~~ll~i~a~tKS 178 (527)
T MTH00095 111 SSFFLVLFYNN-WNSCSGAMNTVLTNRLGDFFIFLFFSGFIFSSYYFLSFSFF-----------SSSMSLMLLLASFTKS 178 (527)
T ss_pred HHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHH
T ss_conf 99999820698-88999999999999999999999999999997899988899-----------9999999999999984
Q ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 321100012101221001233332100-0002321111124400011222100000122210222200000124454435
Q gi|254780867|r 221 ALVPFHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLM 299 (478)
Q Consensus 221 ~~fPfH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~Krll 299 (478)
T Consensus 179 AQfPfh~WLP~AM~-APTPVSALvHSsTlVtAGVyLliR~~~~~~~--~~~~~~ll~iG~lT~~~~~l~Al~q~DiKkil 255 (527)
T MTH00095 179 AQFPFSSWLPKAMA-APTPVSSLVHSSTLVTAGLYLLMNFSYPLMN--KNVLKIMLLIGLFTMFFSSLSALVEEDLKKVV 255 (527)
T ss_pred CCCCCHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 20656232467617-9993679997789999899999999999823--89999999999999999999998476589999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 64211124421111112157788886430023201001100002678740876455021046652321147899998653
Q gi|254780867|r 300 AYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFS 379 (478)
Q Consensus 300 AySsi~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~ls 379 (478)
T Consensus 256 AySTlSQLG~M~~~lGlG~~~--la~fHL~~HA~FKalLFL~aG~iIh~~~-g~QDiR~mggl~~~~p~~~~~~~i~~ls 332 (527)
T MTH00095 256 ALSTLSQMGFSMLTFGSGLSF--LSFFHLLSHALFKSCLFMQVGYLIHCMF-GQQDGRNYSNLGNLPVFIQLQMLVTLFC 332 (527)
T ss_pred HHHHHHHHHHHHHHHHHCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 999898999999999856699--9999999999999999997789998369-9417898658665538999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 0366500006759999999996284999-999999999999999999999964998778655673321899999999999
Q gi|254780867|r 380 LAGIPPFAGFFGKYFLLISAVKREFYVL-AIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRLFIFGSILFVTG 458 (478)
Q Consensus 380 l~GlPp~~GF~sK~~i~~~~~~~~~~~~-~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (478)
T Consensus 333 L~G~PflsGFySKD~ILe~~~~~~~~~~~~~l~~~s~~lT~~YS~Rl~~~~f~~~~~~~~~~--~~~~~~~~~~~~l~~~ 410 (527)
T MTH00095 333 LCGLFFTSGFVSKEFILELFFSNSFMIFFSFMFFFSVFLTFGYSYRLWKSFFLSFSKSVYNY--SSSVVMNFLSLLLVFF 410 (527)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHC--CCHHHHHHHHHHHHHH
T ss_conf 85543532898899999999981189999999999999999999999999992667643000--2218999999999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780867|r 459 YFLI 462 (478)
Q Consensus 459 ~~~~ 462 (478)
T Consensus 411 si~f 414 (527)
T MTH00095 411 SIFF 414 (527)
T ss_pred HHHH
T ss_conf 9999