HHsearch alignment for GI: 254780867 and conserved domain: MTH00137
>MTH00137 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00 E-value=0 Score=514.20 Aligned_cols=385 Identities=18% Similarity=0.230 Sum_probs=323.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 00316764100799999999999999999999996321002242066799999999998731461022124577788777
Q gi|254780867|r 64 IGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALY 143 (478)
Q Consensus 64 ~~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~ 143 (478)
T Consensus 78 ~~i~~~f~~D~~S~~f~~vv~~Is~~I~~yS~~YM~~d~~~-~RF~~~l~lF~~sMl~LV~s~Nl~~lfiGWEgvGl~Sy 156 (611)
T MTH00137 78 FDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNM-NRFFKYLLLFLIAMIILVTANNMFQLFIGWEGVGIMSF 156 (611)
T ss_pred CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 15176632185389999999999999999978970799982-27999999999999999997439999999999999999
Q ss_pred HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 76653200013445555540146204679988988530010000012222111013431000012222112344444321
Q gi|254780867|r 144 VLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALV 223 (478)
Q Consensus 144 ~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~f 223 (478)
T Consensus 157 lLI~~w~~r~~a~~aa~~a~l~nRiGDiglll~i~~l~~~~gs~~~~~i~~~~~~~~----~~~~~~~l~laa~~KSAQf 232 (611)
T MTH00137 157 LLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWFAMNLNSWEIQQIFALSKDFD----LTLPLLGLILAATGKSAQF 232 (611)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC----HHHHHHHHHHHHHHHHCCC
T ss_conf 999995398678999999999993438999999999999977744999998612103----5999999999997542317
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 100012101221001233332100-0002321111124400011222100000122210222200000124454435642
Q gi|254780867|r 224 PFHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYS 302 (478)
Q Consensus 224 PfH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAyS 302 (478)
T Consensus 233 Pfh~WLP~AMe-gPTPVSALlHSsTmV~AGVyLliR~~pl~~~-~~~~l~~~l~lG~lT~l~aa~~Al~Q~DiKkiiAyS 310 (611)
T MTH00137 233 GLHPWLPSAME-GPTPVSALLHSSTMVVAGIFLLIRLSPLMEN-NQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFS 310 (611)
T ss_pred CCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 56052388865-8981679998889999618999998578762-699999999999999999999997312187899987
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 11124421111112157788886430023201001100002678740876455021046652321147899998653036
Q gi|254780867|r 303 SIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAG 382 (478)
Q Consensus 303 si~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~G 382 (478)
T Consensus 311 T~SQLGlM~~~iGlg~~--~lA~fHL~tHA~FKAlLFL~aG~iIH~~~-~~QDir~mGgl~~~mP~t~~~~~igsLaL~G 387 (611)
T MTH00137 311 TSSQLGLMMVTIGLNQP--QLAFLHICTHAFFKAMLFLCSGSIIHSLN-DEQDIRKMGGLHNLTPFTSSCLTIGSLALTG 387 (611)
T ss_pred HHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 88899999999874628--89999999999999999983069999637-8531998679741028999999999999853
Q ss_pred CCHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCCHHHHHHHHHHHHH
Q ss_conf 65000067599999999962849-9999999999999999999999996499877865567-3321899999999999
Q gi|254780867|r 383 IPPFAGFFGKYFLLISAVKREFY-VLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVA-KEMRLFIFGSILFVTG 458 (478)
Q Consensus 383 lPp~~GF~sK~~i~~~~~~~~~~-~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 458 (478)
T Consensus 388 ~PflsGFySKD~IlE~~~~s~~n~~~~~l~~~at~lT~~Ys~Rl~~~~~~~~~~~~~~~~~~E~~~~m~~pl~~La~g 465 (611)
T MTH00137 388 TPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFLPLSPINENNPAVINPIKRLAWG 465 (611)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 423137875899999998667089999999999999999999999999558998878788888977899999999999