HHsearch alignment for GI: 254780867 and conserved domain: MTH00196
>MTH00196 ND2 NADH dehydrogenase subunit 2; Provisional.
Probab=100.00 E-value=0 Score=510.13 Aligned_cols=352 Identities=37% Similarity=0.668 Sum_probs=304.7
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 99999998731461022124577788777766532000134455555401462046799889885300100000122221
Q gi|254780867|r 115 AVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIAT 194 (478)
Q Consensus 115 ~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~ 194 (478)
T Consensus 2 ~~lG~l~lv~s~dl~~~~v~~El~~l~~y~Li~~~~~~~~~~eAa~KYfi~~~~~s~~lL~gi~lly~~tGs~~~~~l~~ 81 (365)
T MTH00196 2 VALGSLCLISSSNWLSVYLAIELSTLCLFILVAQKGGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGLTGGTHISYIEL 81 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 79999999999899999999999999999998548999899999999999999999999999999999982946999999
Q ss_pred HHHCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 110134--310000122221123444443211000121012210012333321000002321111124400011222100
Q gi|254780867|r 195 SLFIGH--RSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLP 272 (478)
Q Consensus 195 ~~~~~~--~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~ 272 (478)
T Consensus 82 ~~~~~~~~~~~~~~~~~~li~~~l~~K~~~~PfH~WlPda~~~ap~~~salla~~~K~~~~~il~~~~~--------~~~ 153 (365)
T MTH00196 82 LLNSGQSFSEVRVPIGYLLITVALLFKLSVAPFHMWAPDVYEGAPTTTTALLAIVPKVGVFSILVSIGL--------PVN 153 (365)
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH--------HHH
T ss_conf 973554440478999999999999998452655567776467998799999999999999999999857--------899
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCC
Q ss_conf 0001222102222000001244544356421112442111111215-778888643002320100110000267874087
Q gi|254780867|r 273 IFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGN 351 (478)
Q Consensus 273 ~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~ 351 (478)
T Consensus 154 ~~~~~~~~s~i~G~~~al~Q~dlKrllAYSSIsh~G~i~l~i~~~~~~~~~~~l~~~~~~~~~~~~lf~~~~~~~----~ 229 (365)
T MTH00196 154 ILLVGALFSLFVGALGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESLQASLVYLFLYIIMSICVFSIILALG----V 229 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----C
T ss_conf 999999999999999998643557457668887999999999983178999999999999999999999999998----1
Q ss_pred CCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 64550210466523211478999986530366500006759999999996284999999999999999999999999964
Q gi|254780867|r 352 NIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWF 431 (478)
Q Consensus 352 ~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~ 431 (478)
T Consensus 230 ~~~~i~~~~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~~K~~il~~~~~~~~~~~~~~~~~~s~ls~~Yylrl~~~~~f 309 (365)
T MTH00196 230 YKNLLVEFSGLSRRLPFLALTLALTFLSIAGIPPLVGFLGKWLVLLSGVVSQYYLIFLLAVVCSVIAGVYYVRIVKIIFF 309 (365)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 47899999717887399999999999998653534458999999999998687999999999999999999999999990
Q ss_pred CCCCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99877865---------567332189999999999999997676589999987519
Q gi|254780867|r 432 DQSTECVV---------VVAKEMRLFIFGSILFVTGYFLIENILNSSIMKIVMSLF 478 (478)
Q Consensus 432 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 478 (478)
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~i~~~~i~P~~ll~~~~~~~~~l~ 365 (365)
T MTH00196 310 QANSFLLISTKALKKENKINLRKALLIGASLYLIGFTILSPNLLFQLAHWAIGGLF 365 (365)
T ss_pred CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
T ss_conf 89975433326540136775889999999999999998587999999999987519