HHsearch alignment for GI: 254780867 and conserved domain: MTH00198
>MTH00198 ND2 NADH dehydrogenase subunit 2; Provisional.
Probab=100.00 E-value=0 Score=442.26 Aligned_cols=377 Identities=32% Similarity=0.600 Sum_probs=307.0
Q ss_pred HHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC------CHHHH--HH
Q ss_conf 999999999963210022-4206679999999999873146102212457778877776653200------01344--55
Q gi|254780867|r 88 IIIFIKMFSCIYVKPFSC-FEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRK------SVFSI--EA 158 (478)
Q Consensus 88 l~~~~~~~~~~~~~~~~~-~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~------~~~~~--~a 158 (478)
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~lvliv~l~~lllv~s~nwlsiyla~elqtl~lfil~a~~~~~~~~~~~~~~~~~EA 233 (596)
T MTH00198 154 CVILLSLMGLLFLTNERGPGSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGESSEPRRLPSGASNTPPES 233 (596)
T ss_pred HHHHHHHHHHHHEECCCCCCCCEEHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 99999998888500676888761000788642424200101899999999888899998750356554566557898552
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH--HHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 555401462046799889885300100000122221--110134310-00012222112344444321100012101221
Q gi|254780867|r 159 ALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIAT--SLFIGHRSF-VLIVGVVLILVGLFFKMALVPFHMWIPDVYEG 235 (478)
Q Consensus 159 a~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~--~~~~~~~~~-~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ 235 (478)
T Consensus 234 GLKYFVLGAlSSGllLyGcSLiYGfTGst~~~~~i~s~~~~~~~~~l~~~~~G~vFI~vgLlFKlSAaPFHMWaPDVYEG 313 (596)
T MTH00198 234 GLKYWILGAMSSGFYLFGCALYFGFTGNEGMLGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEG 313 (596)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 02667575777758998799840277763116678763114444221111166999999999886137522668744489
Q ss_pred HCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00123333210000023211111244000112221000001222102222000001244544356421112442111111
Q gi|254780867|r 236 SPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFS 315 (478)
Q Consensus 236 ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~ 315 (478)
T Consensus 314 aPT~VTaffA~vPKiA~f~~l~rl~~~--------~~ill~~sIlSmiiGai~Ai~QtnIKRLLAYSSIgHmGfiL~Gla 385 (596)
T MTH00198 314 APTPTTALIAIIPKFTVYILLTSLVIT--------SKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVS 385 (596)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 867899999987999999999999988--------999999999999999999987887889998721547899999987
Q ss_pred CHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHHH-------------------HCCCCCCCCHHHCCCCCCCCHHHHHHHH
Q ss_conf 215-77888864300232010011000026787-------------------4087645502104665232114789999
Q gi|254780867|r 316 TGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRR-------------------KDGNNIQNISDLAGLSRQDIFLTCALTI 375 (478)
Q Consensus 316 ~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~~-------------------~~~~~~~~i~~l~gl~~~~P~~~~~~~i 375 (478)
T Consensus 386 ~Gt~EGIqasliYliIYiiM~Lg~FaiILsL~~~g~~~~~~r~~~~g~~~~~~n~~~ie~IsDLsGLsk~nPiLA~sLaI 465 (596)
T MTH00198 386 AGTYESLQASWTYAVTYLVSALASFTVICTLEEFGTRATTSRKDKQGAFGSPGNYNLVRRLVDLTILSRGQPYIAFSLAI 465 (596)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 25466699999999999999989999999887404433332333210010123542000179765244129199999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----------
Q ss_conf 8653036650000675999999999628-------4999999999999999999999999964998778-----------
Q gi|254780867|r 376 FLFSLAGIPPFAGFFGKYFLLISAVKRE-------FYVLAIVALLSSVISAYYYLRVISIMWFDQSTEC----------- 437 (478)
Q Consensus 376 ~~lsl~GlPp~~GF~sK~~i~~~~~~~~-------~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~----------- 437 (478)
T Consensus 466 ~LFSLAGIPPLAGFfaKfYIL~aaIk~~~s~~l~~yYllaiiaVl~SVIs~fYYlRIVKImYFd~~~pl~~~~~~~s~il 545 (596)
T MTH00198 466 VFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVALFAIICTCISAFYYIRIVATIYFNFTRPLIKTKTPLSFIL 545 (596)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCHHHHH
T ss_conf 99974689713678999999999975311344330689999999988763101363666878626775333456414667
Q ss_pred -----------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -----------65567332189999999999999997676589999
Q gi|254780867|r 438 -----------VVVVAKEMRLFIFGSILFVTGYFLIENILNSSIMK 472 (478)
Q Consensus 438 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (478)
T Consensus 546 ~W~~il~~~~~~~~~~~~ksilig~t~~~IlFl~i~P~~Ll~ith~ 591 (596)
T MTH00198 546 TWESILKGGTSEAEPGGGKSILISIYMYFILFLIICPQPLLLISYE 591 (596)
T ss_pred HHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHCCC
T ss_conf 6898852565200157663342115789999999768799985022