HHsearch alignment for GI: 254780867 and conserved domain: MTH00210
>MTH00210 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00 E-value=0 Score=566.56 Aligned_cols=434 Identities=18% Similarity=0.224 Sum_probs=348.8
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH-HHHHHHHHH--CCCC-------------HHHHHHHHHHHHHHHHH
Q ss_conf 9999999999998640230158999999999999-999999971--3221-------------00316764100799999
Q gi|254780867|r 17 IIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLS-IALFFLLIM--PYEG-------------IGLGGAYISDRFSYFIK 80 (478)
Q Consensus 17 i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~-i~l~~~~~~--~~~~-------------~~~~~~~~~D~~s~~~~ 80 (478)
T Consensus 7 ~lPLi~ali~~l~gr~~~~~~~~~i~~~~~~~s~lls~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~D~ls~~m~ 86 (618)
T MTH00210 7 FFPLLSAIISGLFGRKIGTKGAGVLTSSCIVISAIVSCCIFYETTLNSSVTYIKLWRWFDSELLTTYFGLQFDSLTSTML 86 (618)
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEHHHHHHHH
T ss_conf 99999999999807876621799999999999999999999998347980799862053356767157755326389999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 99999999999999999632100224206679999999999873146102212457778877776653200013445555
Q gi|254780867|r 81 AILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAAL 160 (478)
Q Consensus 81 ~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ 160 (478)
T Consensus 87 ~~v~~is~lv~iYS~~Ym~~d~~-~~rf~~~l~lf~~~Ml~lv~s~nl~~lfvgWE~vgl~SylLI~~~~~~~~a~~aa~ 165 (618)
T MTH00210 87 IVITSVSALVHIYSTGYMSGDPH-IPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAI 165 (618)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 99999999999999998168998-02899999999999999999724999999999999999999975088688999999
Q ss_pred HHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf 54014620467998898853001000001222211101343100001222211234444432110001210122100123
Q gi|254780867|r 161 KYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFM 240 (478)
Q Consensus 161 ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~ 240 (478)
T Consensus 166 ka~i~nrvGd~~lllgi~~l~~~~Gtl~~~~l~~~~~~~~~~~~~~~i~~ll~iga~~KsAqfPlh~WLPdAm~-aPTPV 244 (618)
T MTH00210 166 KAMLVNRVGDIGLVLAMIKILKEFGSLEFSTIYSLLSLVINKESITIICLLLFVGAVGKSAQLGLHTWLPDAME-GPTPV 244 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC-CCCCH
T ss_conf 99999978799999999999999678619999999874027645999999999999998450654652267745-89961
Q ss_pred CCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 3332100-000232111112440001122210000012221022220000012445443564211124421111112157
Q gi|254780867|r 241 TAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGML 319 (478)
Q Consensus 241 salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~~ 319 (478)
T Consensus 245 SALlhaatmV~aGvyll~R~~~l~~-~~~~~~~~v~~~G~~T~~~~~~~Al~Q~DiKrilAySTiSQlGym~~~~gl~~- 322 (618)
T MTH00210 245 SALIHAATMVTAGVFLIIRSGPLFE-GSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGLSN- 322 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH-
T ss_conf 4999999999989998855417753-17899999999999999999999997863778864315988889999986145-
Q ss_pred HHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 78888643002320100110000267874087645502104665232114789999865303665000067599999999
Q gi|254780867|r 320 GIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISA 399 (478)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~ 399 (478)
T Consensus 323 -~~~a~fHl~~Ha~fKalLFL~aG~vih~~~-~~qdi~~mgGL~~~mP~t~~~~~i~~lsl~G~P~~sGF~SKd~ile~~ 400 (618)
T MTH00210 323 -YSTSLFHLMNHAFFKALLFLSAGSVIHAVS-DEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELV 400 (618)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHH
T ss_conf -889999999899999999981349887537-733998818853457589999999999982560313041189999999
Q ss_pred HHCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---CCCCCHHHHHHHHHHH
Q ss_conf 962849999-99999999999999999999964998778655---6733218999999999
Q gi|254780867|r 400 VKREFYVLA-IVALLSSVISAYYYLRVISIMWFDQSTECVVV---VAKEMRLFIFGSILFV 456 (478)
Q Consensus 400 ~~~~~~~~~-~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~---~~~~~~~~~~~~~~~~ 456 (478)
T Consensus 401 ~~~~~~~~~~~~~~~~~~lT~~Ys~r~~~~~f~~~~~~~~~~~~~~he~~~~m~~Pl~~La 461 (618)
T MTH00210 401 YDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVLMGVHESSWNITIPLVLLA 461 (618)
T ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 8762799999999999999999999999987337999987666678888789999999999