HHsearch alignment for GI: 254780867 and conserved domain: MTH00211
>MTH00211 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00 E-value=0 Score=526.71 Aligned_cols=381 Identities=20% Similarity=0.250 Sum_probs=325.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r 65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV 144 (478)
Q Consensus 65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~ 144 (478)
T Consensus 67 ~i~~~~~~D~~S~~f~~~v~~is~~V~~yS~~YM~~d~~~-~rF~~~l~lF~~sMl~Lv~s~Nl~~l~igWEgvgl~Syl 145 (595)
T MTH00211 67 SLNLSFRYDFYSIFFFVVALYVTWSILEFSLWYMSTDPNV-NRFFKYLLLFLISMLILVSANNLFQLLIGWEGVGIMSFL 145 (595)
T ss_pred CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7276511583089999999999999999968873789995-789999999999999999983699999999999999999
Q ss_pred HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66532000134455555401462046799889885300100000122221110134310000122221123444443211
Q gi|254780867|r 145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVP 224 (478)
Q Consensus 145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fP 224 (478)
T Consensus 146 LI~~~~~r~~a~~aa~~a~i~nriGd~~lll~i~~l~~~~~s~~~~~i~~~~-----~~~~~~~~~~l~laa~~KSAQfP 220 (595)
T MTH00211 146 LISWWYGRSDANTAALQAIIYNRIGDIGLILSMFWLLMNLNSWTMQQLFILS-----DMVNTLPLLGFLLAAMGKSAQFG 220 (595)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 8923189589999999999999389999999999999992772499998636-----43889999999999998743165
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00012101221001233332100-00023211111244000112221000001222102222000001244544356421
Q gi|254780867|r 225 FHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSS 303 (478)
Q Consensus 225 fH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySs 303 (478)
T Consensus 221 lh~WLP~AM~-aPTPVSALlHsstmV~AGvylliR~~~~~~~-~~~~~~~~l~lG~lT~l~a~~~Al~q~DiKkilAyST 298 (595)
T MTH00211 221 LHPWLPAAME-GPTPVSALLHSSTMVVAGVFLLIRLSPLILN-NFLVLGAVLCLGALTTLFAALCALTQNDMKKIVAFST 298 (595)
T ss_pred CCHHHHHHHC-CCCCHHHHHHHHHHHHCCHHHEECCCHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7254587606-9992899998758998063100110527441-7899999999999999999999987777878887426
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 11244211111121577888864300232010011000026787408764550210466523211478999986530366
Q gi|254780867|r 304 IGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI 383 (478)
Q Consensus 304 i~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~Gl 383 (478)
T Consensus 299 ~SQlG~M~~aiglg~~--~~a~fHl~~HA~fKalLFL~aG~iIh~~~-~~qDir~mGgl~~~mP~t~~~~~ig~lsL~G~ 375 (595)
T MTH00211 299 TSQLGLMVVALGLGQP--QLAFLHICTHAFFKAMLFLCSGSIIHSLN-NEQDIRKMGGLSKALPFTSSCLIIGSLALMGF 375 (595)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 9888899999876589--99999999789999999983128877447-71379870798876389999999999998467
Q ss_pred CHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-HHHHHHHHHHH
Q ss_conf 5000067599999999962849-9999999999999999999999996499877865567332-18999999999
Q gi|254780867|r 384 PPFAGFFGKYFLLISAVKREFY-VLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEM-RLFIFGSILFV 456 (478)
Q Consensus 384 Pp~~GF~sK~~i~~~~~~~~~~-~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~ 456 (478)
T Consensus 376 P~lsGF~SKD~IlE~~~~s~~n~~~l~l~liat~lTa~YS~Rli~~v~~~~~~~~~~~~~~e~~~~~~~Pl~~La 450 (595)
T MTH00211 376 PFLAGFFSKDSILENMNMSNLNSWALLLTLLATSLTAAYSLRLIYLSLGGNPRMLPLSPINEENNSLKNPLKRLA 450 (595)
T ss_pred CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 600225116899999986624699999999999999999999999999489889988888899889999999999