HHsearch alignment for GI: 254780867 and conserved domain: MTH00211

>MTH00211 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00  E-value=0  Score=526.71  Aligned_cols=381  Identities=20%  Similarity=0.250  Sum_probs=325.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r   65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV  144 (478)
Q Consensus        65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~  144 (478)
T Consensus        67 ~i~~~~~~D~~S~~f~~~v~~is~~V~~yS~~YM~~d~~~-~rF~~~l~lF~~sMl~Lv~s~Nl~~l~igWEgvgl~Syl  145 (595)
T MTH00211         67 SLNLSFRYDFYSIFFFVVALYVTWSILEFSLWYMSTDPNV-NRFFKYLLLFLISMLILVSANNLFQLLIGWEGVGIMSFL  145 (595)
T ss_pred             CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             7276511583089999999999999999968873789995-789999999999999999983699999999999999999


Q ss_pred             HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             66532000134455555401462046799889885300100000122221110134310000122221123444443211
Q gi|254780867|r  145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVP  224 (478)
Q Consensus       145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fP  224 (478)
T Consensus       146 LI~~~~~r~~a~~aa~~a~i~nriGd~~lll~i~~l~~~~~s~~~~~i~~~~-----~~~~~~~~~~l~laa~~KSAQfP  220 (595)
T MTH00211        146 LISWWYGRSDANTAALQAIIYNRIGDIGLILSMFWLLMNLNSWTMQQLFILS-----DMVNTLPLLGFLLAAMGKSAQFG  220 (595)
T ss_pred             HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             8923189589999999999999389999999999999992772499998636-----43889999999999998743165


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             00012101221001233332100-00023211111244000112221000001222102222000001244544356421
Q gi|254780867|r  225 FHMWIPDVYEGSPMFMTAFLATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSS  303 (478)
Q Consensus       225 fH~Wlp~a~~~ap~~~salls~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySs  303 (478)
T Consensus       221 lh~WLP~AM~-aPTPVSALlHsstmV~AGvylliR~~~~~~~-~~~~~~~~l~lG~lT~l~a~~~Al~q~DiKkilAyST  298 (595)
T MTH00211        221 LHPWLPAAME-GPTPVSALLHSSTMVVAGVFLLIRLSPLILN-NFLVLGAVLCLGALTTLFAALCALTQNDMKKIVAFST  298 (595)
T ss_pred             CCHHHHHHHC-CCCCHHHHHHHHHHHHCCHHHEECCCHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             7254587606-9992899998758998063100110527441-7899999999999999999999987777878887426


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             11244211111121577888864300232010011000026787408764550210466523211478999986530366
Q gi|254780867|r  304 IGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI  383 (478)
Q Consensus       304 i~q~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~Gl  383 (478)
T Consensus       299 ~SQlG~M~~aiglg~~--~~a~fHl~~HA~fKalLFL~aG~iIh~~~-~~qDir~mGgl~~~mP~t~~~~~ig~lsL~G~  375 (595)
T MTH00211        299 TSQLGLMVVALGLGQP--QLAFLHICTHAFFKAMLFLCSGSIIHSLN-NEQDIRKMGGLSKALPFTSSCLIIGSLALMGF  375 (595)
T ss_pred             HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             9888899999876589--99999999789999999983128877447-71379870798876389999999999998467


Q ss_pred             CHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-HHHHHHHHHHH
Q ss_conf             5000067599999999962849-9999999999999999999999996499877865567332-18999999999
Q gi|254780867|r  384 PPFAGFFGKYFLLISAVKREFY-VLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEM-RLFIFGSILFV  456 (478)
Q Consensus       384 Pp~~GF~sK~~i~~~~~~~~~~-~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~  456 (478)
T Consensus       376 P~lsGF~SKD~IlE~~~~s~~n~~~l~l~liat~lTa~YS~Rli~~v~~~~~~~~~~~~~~e~~~~~~~Pl~~La  450 (595)
T MTH00211        376 PFLAGFFSKDSILENMNMSNLNSWALLLTLLATSLTAAYSLRLIYLSLGGNPRMLPLSPINEENNSLKNPLKRLA  450 (595)
T ss_pred             CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             600225116899999986624699999999999999999999999999489889988888899889999999999