HHsearch alignment for GI: 254780867 and conserved domain: PRK06521
>PRK06521 hydrogenase 4 subunit B; Validated.
Probab=100.00 E-value=0 Score=591.91 Aligned_cols=407 Identities=18% Similarity=0.274 Sum_probs=345.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 031676410079999999999999999999999632100-2242066799999999998731461022124577788777
Q gi|254780867|r 65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPF-SCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALY 143 (478)
Q Consensus 65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~-~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~ 143 (478)
T Consensus 70 ~~~~~~~lD~LSa~fllli~~v~~~~~lYs~~Y~~~~~~~~~~~~~~~~~lf~~~m~~vv~a~dl~~f~vfwElm~l~sy 149 (670)
T PRK06521 70 WLPFHLRLDSLSAFFLLVISLLGAAASLYSLGYGREYEGKGPGRMGFFYNLFLASMVLVLLADDAFSFLVAWEMMSLSSW 149 (670)
T ss_pred CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87558898777899999999999999998058741067876028999999999999999999589999999999999999
Q ss_pred HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 76653200013445555540146204679988988530010000012222111013431000012222112344444321
Q gi|254780867|r 144 VLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALV 223 (478)
Q Consensus 144 ~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~f 223 (478)
T Consensus 150 ~LV~~~~~~~~~~~Aa~~y~i~~~~G~~~lL~g~~lly~~~Gs~~f~~~~~~~---~~~~~~~~~f~l~l~Gf~~Kagl~ 226 (670)
T PRK06521 150 FLVMANHRDAENRRAGFLYLLMAHAGTLAILLAFGLLAGESGSYDFAAMRAAH---LSPFLASLVFLLALFGFGAKAGLV 226 (670)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99984089899999999999999999999999999999994791099998505---561689999999999999873737
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC-CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 100012101221001233332100000232111112440001122-2100000122210222200000124454435642
Q gi|254780867|r 224 PFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLS-GLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYS 302 (478)
Q Consensus 224 PfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~-~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAyS 302 (478)
T Consensus 227 PfH~WLP~A~~~APtpVSALlSgvmvK~GvygliR~~~~l~~~~~~~~~~~ll~lg~~t~v~G~l~Al~Q~DiKRlLAYS 306 (670)
T PRK06521 227 PLHVWLPRAHPAAPSHVSALMSGVMTKVAIYGILRVVFDLLGAPQWWWGVLVLALGAISAVLGVLYALAETDLKRLLAYS 306 (670)
T ss_pred CCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 55022157778898089999988899999999999888704634889999999999999999999999884589999998
Q ss_pred CCCCCCCCCCCCCCH------------HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHH
Q ss_conf 111244211111121------------57788886430023201001100002678740876455021046652321147
Q gi|254780867|r 303 SIGHAGYALIGFSTG------------MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLT 370 (478)
Q Consensus 303 si~q~G~i~~~l~~~------------~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~ 370 (478)
T Consensus 307 SIsq~G~i~lglG~~~~~~~~g~~~l~~l~~~gal~H~~nHa~fK~lLFl~aG~v~~~tg--tr~i~~mgGL~~~mP~t~ 384 (670)
T PRK06521 307 TIENIGIIFVGLGLAMVFIAYGMPALAALALTAALYHLLNHALFKSLLFLGAGAVLHATG--TRDMEKLGGLIRRMPWTA 384 (670)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHCCHHHHHHHHH
T ss_conf 899999999999852331001210213789999999999999999999999999999968--651889589554347999
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCH---H-------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 8999986530366500006759999999996284---9-------99999999999999999999999964998778655
Q gi|254780867|r 371 CALTIFLFSLAGIPPFAGFFGKYFLLISAVKREF---Y-------VLAIVALLSSVISAYYYLRVISIMWFDQSTECVVV 440 (478)
Q Consensus 371 ~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~---~-------~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~ 440 (478)
T Consensus 385 ~~flig~lai~GlPP~~GF~Sk~li~q~~~~~~~~~~~~~~~~~~~~~~~lal~~ala~~~fvk~~g~~FlG~pR~~~~~ 464 (670)
T PRK06521 385 WAFLIGCLAISALPPLNGFVSEWLLFQSLLSSPGLPQWGLKLLVPLAAALLALTAALAAMCFVKFYGITFLGRPRSPKAE 464 (670)
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999999986366425499999999999845666615899999999999999999999999999998303799987655
Q ss_pred CCCCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 673321----899999999999999976765899999875
Q gi|254780867|r 441 VAKEMR----LFIFGSILFVTGYFLIENILNSSIMKIVMS 476 (478)
Q Consensus 441 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (478)
T Consensus 465 ~~~e~p~~m~~~m~iLA~~cv~~Gl~p~~~~~~l~~~~~~ 504 (670)
T PRK06521 465 QAHEVPRWMRAAMLLLAALCVLLGLLPGWVAPLIAPVAQA 504 (670)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_conf 7787974357999999999999995548779888899987