HHsearch alignment for GI: 254780867 and conserved domain: PRK06588
>PRK06588 putative monovalent cation/H+ antiporter subunit D; Reviewed.
Probab=100.00 E-value=4.3e-44 Score=256.53 Aligned_cols=311 Identities=20% Similarity=0.314 Sum_probs=227.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 03167641007999999999999999999999963210022420667999999999987314610221245777887777
Q gi|254780867|r 65 GLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYV 144 (478)
Q Consensus 65 ~~~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~ 144 (478)
T Consensus 13 nfel~fdf~~qnqlia~afli~t~i~~Ly~isq-----~RklE-~li~~LY~gSsIivvfAgDfISmiIswEfMai~s~l 86 (504)
T PRK06588 13 NFELIFDFNPQNQLIALAFLIVTAILNLYTISQ-----NRKLE-CLIGSLYCLSSIICVFAADFISMIISLEFMTIFACI 86 (504)
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHC-----CCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_conf 538998458422699999999999998986611-----52279-999999997687755565799999999999988401
Q ss_pred HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66532000134455555401462046799889885300100000122221110134310000122221123444443211
Q gi|254780867|r 145 LIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVP 224 (478)
Q Consensus 145 LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fP 224 (478)
T Consensus 87 iI-f--s~~~~IKag~RYlivHlfGggLLLaGI~l~i~~TGnlaft~lte~V~n~e------L~~~LILiG~LINAA~pP 157 (504)
T PRK06588 87 II-F--CDQLKIKPARQYFLTHLFSSGLILIGMTLLIQTTSNTAFTSLTESVNNFE------LPAIFILAGCLINASAIF 157 (504)
T ss_pred EE-E--ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCC------HHHHHHHHHHHHHCCCCC
T ss_conf 68-8--27300236666457898633999987888523048500122433212431------259999999998037775
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00012101221001233332100000232111112440001122210000012221022220000012445443564211
Q gi|254780867|r 225 FHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSI 304 (478)
Q Consensus 225 fH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi 304 (478)
T Consensus 158 f~aWL~DAYPeAS~SG~VFLsAFTTKtavyvLlRlFsGl--------eILi~lGi~MiiYGiIyALLENd~RRLLaYsiV 229 (504)
T PRK06588 158 VNGWVVNCYPIASSSGIVYLISFTTKVTLIIILKLFSGL--------EILKFFGISMIIYGLVFSLIEKNLKRLICYLTV 229 (504)
T ss_pred CCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 000035657566655302245788889999999975431--------899999799999999999998769999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHH-HCCCCCHHCCCCHH-HHHHHHHCCCCCCCCHHHCCCC--CCCCHHHHHHHHHHHHC
Q ss_conf 12442111111215778888643-00232010011000-0267874087645502104665--23211478999986530
Q gi|254780867|r 305 GHAGYALIGFSTGMLGIVAMVRY-MVIYLIMMIGFFSC-ILSLRRKDGNNIQNISDLAGLS--RQDIFLTCALTIFLFSL 380 (478)
Q Consensus 305 ~q~G~i~~~l~~~~~~~~~~~~~-~~~~~~~~~~lf~~-~~~~~~~~~~~~~~i~~l~gl~--~~~P~~~~~~~i~~lsl 380 (478)
T Consensus 230 sQvGfmlAaIgI~sp~i~yli~~fif~hilyn-g~falyf~~ie--d~~---~iknyqdl~~t~~n~~ll~gfv~siliy 303 (504)
T PRK06588 230 SQLGFILAAISINSPNIAYLITSFIFIHILYN-GLFALYFTYIE--DEY---DIKNYQDLQNTQINLILLIGFVISILIY 303 (504)
T ss_pred HHHHHEEEEECCCCCCCHHHHHHHHHHHHHHH-HHHHHHHEEEC--CCC---CCCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 87515146760599850999999999999985-18876540111--333---5331767733661644568889999987
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCH
Q ss_conf 366500006759999999996284
Q gi|254780867|r 381 AGIPPFAGFFGKYFLLISAVKREF 404 (478)
Q Consensus 381 ~GlPp~~GF~sK~~i~~~~~~~~~ 404 (478)
T Consensus 304 ~silpi~ssyik~~i~n~l~~n~~ 327 (504)
T PRK06588 304 TSILPISSSYIKDEIANILNENNV 327 (504)
T ss_pred HHHCCCCHHHHHHHHHHHHCCCCE
T ss_conf 630115368888999876254756