HHsearch alignment for GI: 254780867 and conserved domain: PRK06590
>PRK06590 NADH dehydrogenase subunit L; Reviewed.
Probab=100.00 E-value=0 Score=594.15 Aligned_cols=453 Identities=21% Similarity=0.290 Sum_probs=362.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-H--HHHHHHHHHHHCCC---------C-----HHHHHH
Q ss_conf 86299999999999999999998640230158999999999-9--99999999971322---------1-----003167
Q gi|254780867|r 7 INDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVC-L--LSIALFFLLIMPYE---------G-----IGLGGA 69 (478)
Q Consensus 7 ~~~l~lllP~i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~-~--l~i~l~~~~~~~~~---------~-----~~~~~~ 69 (478)
T Consensus 1 mm~ll~lii-~~Pl~ga~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~ 79 (619)
T PRK06590 1 MMNLLWLIV-LLPLIGFLILGLFGGRIGEKGAHLVGTGSVGLSALLSLVVFFDFRALGGQAFNQTLWTWISVGDFDVDFG 79 (619)
T ss_pred CHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECEECCCCCEEEE
T ss_conf 937999999-9999999999997512333899999999999999999999999846799627997540434177471688
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 64100799999999999999999999996321002242066799999999998731461022124577788777766532
Q gi|254780867|r 70 YISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMN 149 (478)
Q Consensus 70 ~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~ 149 (478)
T Consensus 80 ~~~D~ls~~~~~~~~~i~~~v~~ys~~ym~~~~~~-~rf~~~l~lf~~~ml~~v~a~nl~~~~v~wE~~~l~sy~LI~~~ 158 (619)
T PRK06590 80 LRVDGLSATMLVVVTGVSFLVHIYSIGYMAGDPGY-SRFFAYLSLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFW 158 (619)
T ss_pred EEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 86408789999999999999999968981799865-07999999999999999997229999999999999999999874
Q ss_pred HCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 00013445555540146204679988988530010000012222111013431000012222112344444321100012
Q gi|254780867|r 150 RKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWI 229 (478)
Q Consensus 150 ~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wl 229 (478)
T Consensus 159 ~~~~~~~~aa~k~~i~~~~g~~~~l~gi~~l~~~~gt~~~~~i~~~~~~~~~~~~~~~~~~~l~~g~~~Ksa~~P~h~WL 238 (619)
T PRK06590 159 YKKPSANAAAMKAFVVNRVGDFGLALGIFLLFAEFGSLNYDEVFAAAPELLGNSALTLICLLLFIGAMGKSAQFPLHTWL 238 (619)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 57868899999999998476999999999999995898699999874523461399999999999999986607651434
Q ss_pred HHHHHHHCCCCCCCCCC-CEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10122100123333210-00002321111124400011222100000122210222200000124454435642111244
Q gi|254780867|r 230 PDVYEGSPMFMTAFLAT-IPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAG 308 (478)
Q Consensus 230 p~a~~~ap~~~salls~-~~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G 308 (478)
T Consensus 239 pda~~-aPtpvSAllha~~~v~aGvy~~~r~~~~~-~~~~~~~~~i~~~g~~t~~~g~~~al~Q~d~KrllAYStisq~G 316 (619)
T PRK06590 239 PDAME-GPTPVSALIHAATMVTAGVYLVARMSPLF-ELSPEALHFVTIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLG 316 (619)
T ss_pred HHHHC-CCCCHHHHHHHHHHHHHHHHEEHHHCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 66624-89846788728999998863110304451-12789999999999999999999999650268888977988999
Q ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 21111112157788886430023201001100002678740876455021046652321147899998653036650000
Q gi|254780867|r 309 YALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAG 388 (478)
Q Consensus 309 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~G 388 (478)
T Consensus 317 ~m~~~~g~~--~~~~a~~h~~~Ha~~Ka~LFl~aG~vi~~~~-~~~~~~~~gGl~~~mP~t~~~~~i~~lsl~G~Pp~~G 393 (619)
T PRK06590 317 YMFLALGVG--AYAAAIFHLMTHAFFKALLFLGAGSVIHAMH-HEQDIRKMGGLRKKMPVTYATFLIGTLALIGLPPFAG 393 (619)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HEEHHHHCCCCHHCCHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 999999987--8899999999999999999998889998743-2001876289400078999999999998614402206
Q ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 675999999999628499999999999999999999999996499877865567332189999999999999997676
Q gi|254780867|r 389 FFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRLFIFGSILFVTGYFLIENIL 466 (478)
Q Consensus 389 F~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (478)
T Consensus 394 F~sK~~i~~~~~~~~~~~~~~~~~~~~~~t~~y~~r~~~~~f~g~~r~~~~~~~HE~p~~M~~PLvILAilsi~~G~l 471 (619)
T PRK06590 394 FFSKDEILEAAFANGHGFLFVAGLVGAFLTAFYSFRLIFLVFHGKERWHVDHHPHESPGVMTLPLIVLAVLSVFAGAL 471 (619)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 978999999998705739999999999999999999999970789998776677888625999899999999999999