HHsearch alignment for GI: 254780867 and conserved domain: PRK08676
>PRK08676 hydrogenase membrane subunit; Validated.
Probab=100.00 E-value=0 Score=565.74 Aligned_cols=429 Identities=21% Similarity=0.316 Sum_probs=354.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCCCCHHHHHHHH
Q ss_conf 99999999999999713221003-16764100799999999999999999999996321-------00224206679999
Q gi|254780867|r 44 FPVCLLSIALFFLLIMPYEGIGL-GGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVK-------PFSCFEFPVIMLMA 115 (478)
Q Consensus 44 ~~~~~l~i~l~~~~~~~~~~~~~-~~~~~~D~~s~~~~~l~~~~~l~~~~~~~~~~~~~-------~~~~~~f~~l~l~~ 115 (478)
T Consensus 31 ~~l~~~~~sl~~l~~~~~~~~~~~~~~~~iD~Ls~~~l~l~~~v~~l~~lyS~~Ym~~~~~~~~~~~~~~~~fy~l~~l~ 110 (486)
T PRK08676 31 HGLWHLGLSLYVLLVLPLPGYFMESRYLFIDHLGLFVVLIASLIFILAALYARGYVDHLLESGELDPENLKVFYLGFNLL 110 (486)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHCCCCHHEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999999997356421003572221666169999999999999999988885114102456875466999999999
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC------CCCCH
Q ss_conf 999999873146102212457778877776653200013445555540146204679988988530010------00001
Q gi|254780867|r 116 VLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFT------GCTGF 189 (478)
Q Consensus 116 ~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~~~~~g~~~ll~g~~~~y~~~------gs~~~ 189 (478)
T Consensus 111 ~~~m~~~~~s~nl~~fyvf~E~~~i~s~~LI~~~~~-~~~~~Aa~ky~~~~~~~~~~~l~g~~~l~~~~~~~~~~gtl~~ 189 (486)
T PRK08676 111 LSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSA-RENIDAALKYIFIASTAMIFAFIGLIFLFELTRQALGTGTLNW 189 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 999999999958999999999999999999975798-9999999999999999999999999999999998725786039
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC--C
Q ss_conf 22221110134310000122221123444443211000121012210012333321000002321111124400011--2
Q gi|254780867|r 190 SQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPM--L 267 (478)
Q Consensus 190 ~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~salls~~~~~~~~~~l~r~~~~~~~~--~ 267 (478)
T Consensus 190 ~~l~~~~~~~-~~~~~~~~~~l~ligf~~K~~~~PfH~WLPdA~~eAPtpvSalLsavl~k~G~y~i~R~~~~~~~~~~~ 268 (486)
T PRK08676 190 TELAAHASLL-SPGMLGASFLFIFIGFAAKSGIVPFHTWLPAAYAKAPSAVSAVLSGTVLNIGIYGILRMSALLRQSGAA 268 (486)
T ss_pred HHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 9999763137-858999999999999999871512156506766789947999999999999999999999986230248
Q ss_pred CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHCCCCCHHCCCCHHHHHHH
Q ss_conf 221000001222102222000001244544356421112442111111215-7788886430023201001100002678
Q gi|254780867|r 268 SGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLR 346 (478)
Q Consensus 268 ~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~lf~~~~~~~ 346 (478)
T Consensus 269 ~~~~~~l~~lg~~tii~g~~~Al~Q~DlKrlLAYSSIshmG~i~lg~~~gt~~~~~gal~~~i~H~l~k~~LFl~aG~i~ 348 (486)
T PRK08676 269 EQVSNVLIVFGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWALFHMLAHSLVKAGLFFSAGILH 348 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999871167999997999999999999967399999999999999999999999999999
Q ss_pred HHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74087645502104665232114789999865303665000067599999999962849999999999999999999999
Q gi|254780867|r 347 RKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVI 426 (478)
Q Consensus 347 ~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~GF~sK~~i~~~~~~~~~~~~~~~~~~~s~~s~~y~~~~~ 426 (478)
T Consensus 349 ~~~g--t~~i~~l~GL~~~mP~~a~~~~i~~lsl~GlPP~~gF~sK~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 425 (486)
T PRK08676 349 RQYR--SDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGAIS-VWLVLAVLLLLLLAASSFANFL 425 (486)
T ss_pred HHCC--CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9749--976998659886638999999999999987767545999999999999876-7999999999999999999999
Q ss_pred HHHHCCCCCCCC---CC---CCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHC
Q ss_conf 999649987786---55---6733218999999999999999-767658999998751
Q gi|254780867|r 427 SIMWFDQSTECV---VV---VAKEMRLFIFGSILFVTGYFLI-ENILNSSIMKIVMSL 477 (478)
Q Consensus 427 ~~~f~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 477 (478)
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~p~~m~~p~~iLa~l~l~lGv~~p~~l~~~l~~~~~~l 483 (486)
T PRK08676 426 LKAFTRSTPEEENRDPVPYRTPLSMKVPIVILLALVLALGVYFPPGLADFLDQIVKEL 483 (486)
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 9999557788777888877686318999999999999999664467999999999983