HHsearch alignment for GI: 254780867 and conserved domain: TIGR00940
>TIGR00940 2a6301s01 monovalent cation:proton antiporter; InterPro: IPR005663 This family of proteins consists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterised systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter.; GO: 0015077 monovalent inorganic cation transmembrane transporter activity, 0030004 cellular monovalent inorganic cation homeostasis.
Probab=100.00 E-value=0 Score=589.63 Aligned_cols=451 Identities=24% Similarity=0.345 Sum_probs=381.0
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH------------HHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999998640230158999999999999999999------------9713221003167641007999999999
Q gi|254780867|r 17 IIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFL------------LIMPYEGIGLGGAYISDRFSYFIKAILL 84 (478)
Q Consensus 17 i~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~i~l~~~------------~~~~~~~~~~~~~~~~D~~s~~~~~l~~ 84 (478)
T Consensus 6 ilp~~~a~~IpIly~~~~rih~gWFvl~~plV~F~y~l~L~p~t~sGgv~h~ti~WvP~lG~NFtly~DGl~lLFslLIt 85 (809)
T TIGR00940 6 ILPLLLALLIPILYKYDKRIHIGWFVLAIPLVLFLYTLSLLPITASGGVVHKTIDWVPELGLNFTLYLDGLALLFSLLIT 85 (809)
T ss_pred EHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 07899999988744222320246889999999999999765565159602101587766787421344258999999998
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
Q ss_conf 99999999999996321002242066799999999998731461022124577788777766532000134455555401
Q gi|254780867|r 85 MSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFV 164 (478)
Q Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~f~~l~l~~~~g~~~~~~s~~l~~~~v~~E~~~i~~~~LI~~~~~~~~~~~aa~ky~~ 164 (478)
T Consensus 86 gIG~LVvLYsiyYlskk~e~l~nFy~ylL~FMGaMLGVVLSdNlI~LyvFWELTS~~SfLLIsyW~hr~~s~ygAqksl~ 165 (809)
T TIGR00940 86 GIGVLVVLYSIYYLSKKEEKLPNFYVYLLLFMGAMLGVVLSDNLIVLYVFWELTSLASFLLISYWFHREKSRYGAQKSLL 165 (809)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999987775301267616999999995356546787789999999999999999998888746888899875434
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 46204679988988530010000012222111013431000012222112344444321100012101221001233332
Q gi|254780867|r 165 LGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFL 244 (478)
Q Consensus 165 ~~~~g~~~ll~g~~~~y~~~gs~~~~~l~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~fPfH~Wlp~a~~~ap~~~sall 244 (478)
T Consensus 166 ITvfGGlamlgG~ill~~itgsfsi~~~i~~adai~nsplf~~am~LvllGAfTKSAQFPFhiWLPdAMe-APTPVSAYL 244 (809)
T TIGR00940 166 ITVFGGLAMLGGLILLAVITGSFSIDAVIESADAIRNSPLFLTAMVLVLLGAFTKSAQFPFHIWLPDAME-APTPVSAYL 244 (809)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC-CCCCHHHHH
T ss_conf 6432368999999988575163239999961135420523899999999987654203875547802116-858402767
Q ss_pred CCC-EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCH----
Q ss_conf 100-00023211111244000112221000001222102222000001244544356421112442111--11121----
Q gi|254780867|r 245 ATI-PKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALI--GFSTG---- 317 (478)
Q Consensus 245 s~~-~~~~~~~~l~r~~~~~~~~~~~~~~~l~~~g~~t~i~g~~~al~q~d~KrllAySsi~q~G~i~~--~l~~~---- 317 (478)
T Consensus 245 HSATMVKAGlyL~aR~tPvfag-t~~WfW~v~l~GliTL~wgs~~A~~QqDLKgiLAfSTiS~LGlI~~llglGs~~~Hy 323 (809)
T TIGR00940 245 HSATMVKAGLYLVARLTPVFAG-TEAWFWIVALVGLITLLWGSLSAVKQQDLKGILAFSTISQLGLIMVLLGLGSASLHY 323 (809)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC
T ss_conf 6679999889988876112027-557999999999999999999876676667788898885899999999623032154
Q ss_pred ----------HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHH
Q ss_conf ----------5778888643002320100110000267874087645502104665232114789999865303665000
Q gi|254780867|r 318 ----------MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFA 387 (478)
Q Consensus 318 ----------~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~i~~l~gl~~~~P~~~~~~~i~~lsl~GlPp~~ 387 (478)
T Consensus 324 ~~~DSmiK~YA~A~~AAvFHliNHATFKgsLFM~~GiiDHetGT--RDirkLGGL~~iMPitfT~~~i~~aaMAGvPpfN 401 (809)
T TIGR00940 324 DGDDSMIKIYALAAVAAVFHLINHATFKGSLFMAAGIIDHETGT--RDIRKLGGLLAIMPITFTVALIASAAMAGVPPFN 401 (809)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCC--HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 88723899999999999998886578768887551502458886--1576526501044689999999999844775334
Q ss_pred HHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCHHHHHHHHHH-
Q ss_conf 0675999999999628----------49999999999999999999999999649987-78655673321899999999-
Q gi|254780867|r 388 GFFGKYFLLISAVKRE----------FYVLAIVALLSSVISAYYYLRVISIMWFDQST-ECVVVVAKEMRLFIFGSILF- 455 (478)
Q Consensus 388 GF~sK~~i~~~~~~~~----------~~~~~~~~~~~s~~s~~y~~~~~~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~- 455 (478)
T Consensus 402 GFLSKEmFf~~~~~a~~~n~f~~~T~GyLFP~~a~vasvFtfvYs~~fi~~~FfG~~Kpe~lp~k~HE~p~~Ml~sp~iL 481 (809)
T TIGR00940 402 GFLSKEMFFAEAITASLVNLFDVETLGYLFPVVAIVASVFTFVYSLKFIFRVFFGRYKPEDLPKKAHEAPILMLLSPAIL 481 (809)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHH
T ss_conf 21127888888888751574220256678779999999999999999998651688560126798887760753068889
Q ss_pred ---HHHHHHHHHHHHHHHH
Q ss_conf ---9999999767658999
Q gi|254780867|r 456 ---VTGYFLIENILNSSIM 471 (478)
Q Consensus 456 ---~~~~~~~~~~~~~~~~ 471 (478)
T Consensus 482 ~~lv~vfGlfP~~l~~~ii 500 (809)
T TIGR00940 482 ALLVVVFGLFPALLTGSII 500 (809)
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 8888875400245763378