RPSBLAST alignment for GI: 254780867 and conserved domain: TIGR01974
>gnl|CDD|162634 TIGR01974, NDH_I_L, proton-translocating NADH-quinone oxidoreductase, chain L. This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. Length = 617
Score = 74.6 bits (184), Expect = 6e-14
Identities = 85/326 (26%), Positives = 141/326 (43%), Gaps = 30/326 (9%)
Query: 119 MLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGIS 178
ML ++ A++ + + E Y+LI K + AA+K FV+ LL GI
Sbjct: 127 MLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIF 186
Query: 179 FIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPM 238
I+ + G F ++ +L G L + +L+ +G K A +P H W+PD EG
Sbjct: 187 LIFWYFGTLNFQEV-FALAPGADFSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGP-- 243
Query: 239 FMTAFLATIPKFATTMA------LCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQ 292
T A I A TM + R TS + + L + + + + + VA+ Q
Sbjct: 244 --TPVSALI--HAATMVTAGVYLVAR-TSPLFELSPTALYLVTIIGAITALFAATVALVQ 298
Query: 293 KDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNN 352
D+KR++AYS+ GY + G I+ +M FF +L L G+
Sbjct: 299 NDIKRILAYSTCSQLGYMFLALGVGAYAAA-------IFHLMTHAFFKALLFL--GAGSV 349
Query: 353 I------QNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYV 406
I Q+I + GL ++ I +L G P FAGFF K +L +A +
Sbjct: 350 IHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHS 409
Query: 407 LA-IVALLSSVISAYYYLRVISIMWF 431
+ L+ + ++A+Y R+I + +
Sbjct: 410 FLFVAGLIGAFLTAFYSFRLIFMTFH 435