RPSBLAST alignment for GI: 254780867 and conserved domain: COG1008

>gnl|CDD|31212 COG1008, NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]. Length = 497
 Score =  110 bits (277), Expect = 9e-25
 Identities = 95/385 (24%), Positives = 179/385 (46%), Gaps = 10/385 (2%)

Query: 81  AILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSF 140
            ++L+++++  + + +           F  + L+   G++ + +A D++ FY+  EL   
Sbjct: 85  LLVLLTALLTLLAILASWREIEKRPKLFYALFLLLEGGVIGVFAALDLLLFYVFWELMLI 144

Query: 141 ALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGH 200
            +Y LI +       I AA K+F+     S F+L    ++Y  TG   F  I   L +  
Sbjct: 145 PMYFLIGIWGGKR-RIYAATKFFLYTLLGSLFMLLAFLYLYFLTGSPTFD-ILELLALNL 202

Query: 201 RSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRIT 260
              V  +  +  L+    KM L P H W+PD +  +P   +  LA I        L R +
Sbjct: 203 PLGVQTLLFLGFLIAFAVKMPLFPLHTWLPDAHVEAPTAGSVILAGILLKMGGYGLLRFS 262

Query: 261 SVFWPMLSG-LLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIG-FSTGM 318
              +P  S    P+ + + + S++ G++VA  Q D+KRL+AYSSI H G+  +G FS   
Sbjct: 263 LPLFPDASAYFAPLLVALGVISIIYGALVAFAQTDIKRLIAYSSISHMGFVTLGIFSFNE 322

Query: 319 LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLF 378
           LG+   V  M+ + ++    F  +  L  +     ++I+DL GL+ +   L     +F  
Sbjct: 323 LGVSGAVFQMLSHGLISAALFLLVGVLYERTHT--RDIADLGGLANKMPKLAALFMLFAM 380

Query: 379 SLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECV 438
           +  G+P  +GF G+ FL++    + F  +A +A    +++A Y L +   ++F    E  
Sbjct: 381 ASLGLPGTSGFVGE-FLILLGSFQVFPWVAFLAAFGLILTAVYMLWMYQRVFFGPLKEGS 439

Query: 439 VVVAKEMR---LFIFGSILFVTGYF 460
           +    ++    +FI   ++ +  + 
Sbjct: 440 LAELPDLNGREVFILAPLVVLILFL 464