RPS-BLAST 2.2.22 [Sep-27-2009]
Database: CddA
21,609 sequences; 6,263,737 total letters
Searching..................................................done
Query= gi|254780867|ref|YP_003065280.1| NADH dehydrogenase subunit N
[Candidatus Liberibacter asiaticus str. psy62]
(478 letters)
>gnl|CDD|31211 COG1007, NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N)
[Energy production and conversion].
Length = 475
Score = 299 bits (767), Expect = 1e-81
Identities = 194/476 (40%), Positives = 281/476 (59%), Gaps = 6/476 (1%)
Query: 7 INDLRLCIPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPYEGIGL 66
++L L +PEII+A L LLL+G+F RR + L V L AL LL + Y G
Sbjct: 2 SSNLSLLLPEIILAITALVLLLVGLFIRR-SRSLLAYLAVLGLLAALASLLFIAYRGSAF 60
Query: 67 GGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISAN 126
GA+I D + +K ++L++S+ I + EF ++L A LGM+ M SAN
Sbjct: 61 AGAFIVDALALLMKIVVLLASLAALILSLPYLERAGTFKGEFYALLLFATLGMIVMASAN 120
Query: 127 DMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGC 186
+++ ++ LEL S ALYVL A+ R S S EAALKYFVLGA SSAFLLYGI+ +YG TG
Sbjct: 121 NLLLLFIGLELLSLALYVLAALRRDSKRSSEAALKYFVLGALSSAFLLYGIALVYGATGS 180
Query: 187 TGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLAT 246
S IA L G L++G+V I+ GL FK++ VPFHMW PDVYEG+P +TAFL+T
Sbjct: 181 LSLSGIAAYLNGGGEPLGLLLGLVFIIAGLGFKLSAVPFHMWTPDVYEGAPTPVTAFLST 240
Query: 247 IPKFATTMALCRITSV-FWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIG 305
PK A L RI F P IF +++ SM++G+ A+ Q ++KRL+AYSSI
Sbjct: 241 APKIAAFAVLLRIFVTAFGPDAPDWYLIFAIIAVASMLVGNFAALSQTNVKRLLAYSSIA 300
Query: 306 HAGYALIGFSTG-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSR 364
H GY L+G + + G A++ Y++ Y M +G F + L K+G ++ISDLAGLS+
Sbjct: 301 HMGYLLVGLAAVTVGGYAAVLFYLLAYAFMSLGAFGVVALLSSKEGGA-ESISDLAGLSK 359
Query: 365 QDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLR 424
+ L LTI + SLAGIPP AGF+GK+++ ++AV+ + LA++A+L+S ISAYYYLR
Sbjct: 360 RHPLLAALLTILMLSLAGIPPLAGFWGKFYVFLAAVQAGLWWLAVIAVLNSAISAYYYLR 419
Query: 425 VISIMWFDQSTECVVVV--AKEMRLFIFGSILFVTGYFLIENILNSSIMKIVMSLF 478
V+ M+F++ ++ + + + V ++ + + LF
Sbjct: 420 VVKAMYFEEPEGAFRDAPQYTALKAVLLVAAILVLVLGILPQPVIDLAAQAAAVLF 475
>gnl|CDD|176990 CHL00049, ndhB, NADH dehydrogenase subunit 2.
Length = 494
Score = 253 bits (647), Expect = 1e-67
Identities = 153/427 (35%), Positives = 237/427 (55%), Gaps = 16/427 (3%)
Query: 14 IPEIIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPYEG--IGLGGAYI 71
PE I+ FG++ LL++ + S +K+ L L +++ LL E I G +
Sbjct: 17 FPECILIFGLILLLMIDLTSDQKDIPWLYFISSTSLVMSITALLFQWREEPMISFSGNFQ 76
Query: 72 SDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISF 131
++ F+ + ++L+ S + I + EF + +L A LG + + AND+I+
Sbjct: 77 TNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITI 136
Query: 132 YMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGC-TGFS 190
+++LE S Y+L +K V S EA +KY ++G SS+ L+YG S++YG +G
Sbjct: 137 FVALECLSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQ 196
Query: 191 QIATSL--FIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIP 248
+I L + S + + ++ I VG+ FK++L PFH W PDVYEGSP + AFL+
Sbjct: 197 EIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTS 256
Query: 249 KFATTMALCRITSVFWPMLSG----LLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSI 304
K A + RI + + S LL I ++I SM+LG+++AI Q +KR++AYSSI
Sbjct: 257 KVAASALATRIFDIPFYFSSNEWHLLLEI---LAILSMILGNLIAITQTSMKRMLAYSSI 313
Query: 305 GHAGYALIGFSTGML--GIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGL 362
G GY +IG G G +M+ YM+ Y+ M +G F+CI+ + G + NI D AGL
Sbjct: 314 GQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTGTD--NIRDYAGL 371
Query: 363 SRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYY 422
+D FL +L + L SL GIPP AGFFGK +L + Y L + LL+SVIS YYY
Sbjct: 372 YTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYY 431
Query: 423 LRVISIM 429
L++I ++
Sbjct: 432 LKIIKLL 438
>gnl|CDD|177245 MTH00199, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 460
Score = 236 bits (605), Expect = 9e-63
Identities = 162/453 (35%), Positives = 257/453 (56%), Gaps = 25/453 (5%)
Query: 15 PEIIIAFGILFLLLMGV-FSRRKNAFHLVVFPVCLLSIALFFLLIMPYEGIGLGGAYISD 73
PE++++ +L L+L GV S K + +++ ++ + L G G +++
Sbjct: 6 PEVLLSLVVLSLVLYGVNLSTLKLSIGVLLLIGLIVELNSLNLFQSDKVLDGTNGLLLTN 65
Query: 74 RFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYM 133
+ K I+++ SI I + M S + P+++L+ LG L ++S+ + +S Y+
Sbjct: 66 SWIIISKIIIIIGSISILL-MGSGETILSEGGQSSPILILIVALGSLLLVSSINWLSIYL 124
Query: 134 SLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIA 193
++ELQ+ L++L+A+ R S +S EA LKYFVLGA SS L+G + +YG TG T I
Sbjct: 125 AIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGIN 184
Query: 194 TSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATT 253
+ L VG +LI + L FK++ PFHMW PDVYEG+P TA LAT+PK
Sbjct: 185 SILTGD-------VGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVF 237
Query: 254 MALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIG 313
L +I V + + ++ S++ G++ A+ Q +KRL+AYS IGH G+ L G
Sbjct: 238 SILVQIGPV--------TNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFG 289
Query: 314 FSTGML-GIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCA 372
+ G I A + YM+IY+IM I FS ILSL+ G I +++GLSR++ +
Sbjct: 290 VAIGSFESIQASLIYMIIYVIMSICSFSIILSLKLTKG----LIVEVSGLSRKNPVIALT 345
Query: 373 LTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFD 432
L + S+AGIPP AGF K+ +L+S V +Y++ I+A+LSSVI+ YY+RV+ I++F
Sbjct: 346 LALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRVVQIIYFQ 405
Query: 433 QSTECVV---VVAKEMRLFIFGSILFVTGYFLI 462
++ V+ KE RL + SIL +F+I
Sbjct: 406 ADYSILIWQKVLKKEERLDLSKSILIGVTFFII 438
>gnl|CDD|177243 MTH00196, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 365
Score = 216 bits (553), Expect = 9e-57
Identities = 137/377 (36%), Positives = 213/377 (56%), Gaps = 24/377 (6%)
Query: 114 MAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFL 173
M LG+LC+IS+++ +S Y+++ELQ+ +L++LIA NR S +S EA LKYFVLGA SS
Sbjct: 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLF 60
Query: 174 LYGISFIYGFTGCTGFSQIATSLFIGHR--SFVLIVGVVLILVGLFFKMALVPFHMWIPD 231
L+G + + G TG S I L G S + +G +LI+V L FK+++ PFHMW PD
Sbjct: 61 LFGCALLCGTTGGLHLSYINLVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPD 120
Query: 232 VYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIR 291
VYEG+P TA LA +PK L I I + + S+ +G++ A+
Sbjct: 121 VYEGAPTKTTALLAIVPKLGIFSILVSIGLNV--------NILLIGGLFSLFVGAIGALN 172
Query: 292 QKDLKRLMAYSSIGHAGYALIGFSTG-MLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDG 350
Q +KRL+AYS IGH G+ L G G I A + Y+ IY+IM I FS IL+L
Sbjct: 173 QTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIILAL----N 228
Query: 351 NNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIV 410
I + +GLSR+ L L + S+AGIPP GF GK+ +L+S V ++Y++ ++
Sbjct: 229 VYKNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLL 288
Query: 411 ALLSSVISAYYYLRVISIMWFDQSTECVV---VVAKEMRL-----FIFGSILFVTGYFLI 462
A+ SVI+ YY+R++ I++F ++ ++ ++ KE ++ + G L++ + ++
Sbjct: 289 AVFCSVIAGVYYVRIVKILFFQANSFLLISTKILKKENKINLRKALLIGFSLYLILFTIL 348
Query: 463 E-NILNSSIMKIVMSLF 478
N + LF
Sbjct: 349 SPNFFFQLAHWAIGGLF 365
>gnl|CDD|164746 MTH00198, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 607
Score = 181 bits (460), Expect = 4e-46
Identities = 128/356 (35%), Positives = 199/356 (55%), Gaps = 42/356 (11%)
Query: 111 IMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIA--MNRKSVFSI------EAALKY 162
++L+ LG L +I + + ++ Y++LE Q+ AL++L S F E+ LKY
Sbjct: 193 LVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHFPSPGNTPPESGLKY 252
Query: 163 FVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVL---IVGVVLILVGLFFK 219
++LGA SS F L+G + +GFTG G S + + L +G + I V + FK
Sbjct: 253 WILGAMSSGFYLFGCALYFGFTGNEGMLGTILSATLETTNIELRQGSLGYLFITVAILFK 312
Query: 220 MALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSI 279
+A PFHMW PDVYEG+P TA +A IPKF + L + + S LL + V+I
Sbjct: 313 LAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLV-----ITSKLL---LSVAI 364
Query: 280 GSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGML-GIVAMVRYMVIYLIMMIGF 338
S+V+G+ A+ Q +KRL+AYS IGH G+ LIG S G + A Y V YL+ +
Sbjct: 365 ISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALAS 424
Query: 339 FSCILSL----------RRKDG-----NNIQNISDLAGLSRQDIFLTCALTIFLFSLAGI 383
F+ I +L R++DG N ++ + DL LSR ++ +L I SLAGI
Sbjct: 425 FTVICTLEEFGTRTPTSRQRDGSFGNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGI 484
Query: 384 PPFAGFFGKYFLLISAVKREF-------YVLAIVALLSSVISAYYYLRVISIMWFD 432
PP GF GK+F+L+ ++K F Y++A+ A++ + ISA+YY+R+++ ++F+
Sbjct: 485 PPLLGFLGKWFILVGSIKIAFSSSLSIYYLVALFAIICTCISAFYYIRIVATIYFN 540
>gnl|CDD|109421 pfam00361, Oxidored_q1, NADH-Ubiquinone/plastoquinone (complex I),
various chains. This family is part of complex I which
catalyses the transfer of two electrons from NADH to
ubiquinone in a reaction that is associated with proton
translocation across the membrane.
Length = 270
Score = 144 bits (366), Expect = 4e-35
Identities = 93/276 (33%), Positives = 145/276 (52%), Gaps = 7/276 (2%)
Query: 125 ANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFT 184
+N+++ FY+ EL Y+LI S S+EA+LKYF+ A S FLL+GI +IYG T
Sbjct: 1 SNNLLLFYLGWELLGLPSYLLIGFWGYSPRSLEASLKYFLYTALGSLFLLFGILYIYGLT 60
Query: 185 GCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFL 244
G F+ + S L++ +L+LV K PFH W+PD +EG P + L
Sbjct: 61 GSLSFTLLFLFGLN---SNGLLLLSLLLLVAFLVKSPQFPFHFWLPDAHEGPPPVSSLIL 117
Query: 245 ATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSI 304
AT K A L R++++F + + I + + I SM+LGS+ A+ Q DLK+L+AYSSI
Sbjct: 118 ATTLKKAGLYLLLRLSNLF-SSSNLISYILLILGILSMLLGSLGALNQTDLKKLIAYSSI 176
Query: 305 GHAGYALIG-FSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLS 363
H G+ ++G S G GI+ + +++ + F + + +++ + GL
Sbjct: 177 SHMGFVMMGILSLGSYGIIGAIIHLISHGFFSALLFLLAGLII--HRSGTRDLRNYGGLF 234
Query: 364 RQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISA 399
L L + L SL G+PP GF K+ +L S
Sbjct: 235 NSMPILALLLLLLLLSLMGLPPLLGFISKFLILESL 270
>gnl|CDD|30996 COG0651, HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+
antiporter, MnhD subunit [Energy production and
conversion / Inorganic ion transport and metabolism].
Length = 504
Score = 127 bits (320), Expect = 7e-30
Identities = 109/461 (23%), Positives = 208/461 (45%), Gaps = 20/461 (4%)
Query: 18 IIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLI------MPYEGIGLGGAYI 71
++A +L L L + K L+ LL L FL + + G
Sbjct: 13 LLAAALLLLFLGLRRLKAKRFLALLGALGLLLLSILGFLEVGGPVGGLGGWLAPFGIVLA 72
Query: 72 SDRFSYFIKAILLMSSIIIFIKMFSCIYVKPFSCFE-FPVIMLMAVLGMLCMISANDMIS 130
+D S +L+++ + + ++S Y++ + ++L+ + GML D+ +
Sbjct: 73 ADPLSAIF--LLIIALVGLLASLYSIGYMRHEKERAYYYFLLLLLLAGMLGAFLTGDLFN 130
Query: 131 FYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFS 190
Y+ E+ + + Y L+A A KY +LG + LL G+ +Y TG F+
Sbjct: 131 LYVFFEIMTLSSYFLVAHYGGRRRQASAGFKYLILGHIGTLLLLIGVGLLYAATGTLNFA 190
Query: 191 QIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKF 250
IA L + I +L+L+G K L P H W+PD + +P ++A L+ +
Sbjct: 191 DIALKLSSELDPGLGIAAFLLLLIGFGVKAGLFPLHFWLPDAHSEAPSPVSALLSGVLVK 250
Query: 251 ATTMALCRITSVFWPMLSG---LLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHA 307
+ RI + +P+L G + + + I +++ G + A+ QKD+KRL+AYS++
Sbjct: 251 VGVYGILRILYLVFPLLGGAYLWGNLLIALGILTILFGVLYALLQKDIKRLLAYSTVSQM 310
Query: 308 GYALIGFSTGM-LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQD 366
GY L+G G LG+ + +++ + ++ F ++ + G +++ L GL+++
Sbjct: 311 GYILLGLGIGTPLGLAGAIFHLLNHALVKALLFLGAGAVLYRTGT--RDLEKLGGLAKRM 368
Query: 367 IFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKRE-----FYVLAIVALLSSVISAYY 421
A I SLAG+PPF GF K+ L+ + K +LA + LL+S+ +
Sbjct: 369 PLTAVAFLIGALSLAGLPPFNGFISKFLLIQALFKANALLAILIILAALILLASLATFIS 428
Query: 422 YLRVISIMWFDQSTECVVVVAKEMRLFIFGSILFVTGYFLI 462
R+ +++F Q V + L + ++ ++
Sbjct: 429 LARIFMLLFFGQGAPIERDVPEVPLLMLAPMVILAILCLVL 469
>gnl|CDD|177246 MTH00200, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 347
Score = 111 bits (279), Expect = 5e-25
Identities = 87/318 (27%), Positives = 150/318 (47%), Gaps = 27/318 (8%)
Query: 108 FPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGA 167
P+ +L LG L S++ ++ LE+ + A+ L+ +EA KYF++ A
Sbjct: 6 LPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQ-HHPRKVEATTKYFIIQA 64
Query: 168 FSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHM 227
+SA LL+G +G G S++ L LIL+ L K+ L P H
Sbjct: 65 TASALLLFGGLLNAWTSGQWGISEMLGPL-----------SETLILLALALKLGLAPGHF 113
Query: 228 WIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSV 287
W+PDV +G + L+T K A L ++ I + + + S+++G
Sbjct: 114 WVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSN------ILLLLGLLSVLVGGW 167
Query: 288 VAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRR 347
+ Q L++++AYSSI H G+ L G +A++ Y+++Y+I+ + F L L
Sbjct: 168 GGLNQTQLRKILAYSSIAHLGWLLSGLVYS--PNLALL-YLLLYVIITLTVF---LLLNL 221
Query: 348 KDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVL 407
+ I ++S + L L SL G+PP GFF K+ +L K+ ++
Sbjct: 222 LNSTKINSLSSSKTKNPILSMLLGLT---LLSLGGLPPLTGFFPKWLILQELSKQGLFIY 278
Query: 408 AIVALLSSVISAYYYLRV 425
A + LL S++S ++YLR+
Sbjct: 279 ATILLLGSLLSLFFYLRL 296
>gnl|CDD|31212 COG1008, NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M)
[Energy production and conversion].
Length = 497
Score = 110 bits (277), Expect = 9e-25
Identities = 95/385 (24%), Positives = 179/385 (46%), Gaps = 10/385 (2%)
Query: 81 AILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSF 140
++L+++++ + + + F + L+ G++ + +A D++ FY+ EL
Sbjct: 85 LLVLLTALLTLLAILASWREIEKRPKLFYALFLLLEGGVIGVFAALDLLLFYVFWELMLI 144
Query: 141 ALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGH 200
+Y LI + I AA K+F+ S F+L ++Y TG F I L +
Sbjct: 145 PMYFLIGIWGGKR-RIYAATKFFLYTLLGSLFMLLAFLYLYFLTGSPTFD-ILELLALNL 202
Query: 201 RSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRIT 260
V + + L+ KM L P H W+PD + +P + LA I L R +
Sbjct: 203 PLGVQTLLFLGFLIAFAVKMPLFPLHTWLPDAHVEAPTAGSVILAGILLKMGGYGLLRFS 262
Query: 261 SVFWPMLSG-LLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIG-FSTGM 318
+P S P+ + + + S++ G++VA Q D+KRL+AYSSI H G+ +G FS
Sbjct: 263 LPLFPDASAYFAPLLVALGVISIIYGALVAFAQTDIKRLIAYSSISHMGFVTLGIFSFNE 322
Query: 319 LGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLF 378
LG+ V M+ + ++ F + L + ++I+DL GL+ + L +F
Sbjct: 323 LGVSGAVFQMLSHGLISAALFLLVGVLYERTHT--RDIADLGGLANKMPKLAALFMLFAM 380
Query: 379 SLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECV 438
+ G+P +GF G+ FL++ + F +A +A +++A Y L + ++F E
Sbjct: 381 ASLGLPGTSGFVGE-FLILLGSFQVFPWVAFLAAFGLILTAVYMLWMYQRVFFGPLKEGS 439
Query: 439 VVVAKEMR---LFIFGSILFVTGYF 460
+ ++ +FI ++ + +
Sbjct: 440 LAELPDLNGREVFILAPLVVLILFL 464
>gnl|CDD|39867 KOG4668, KOG4668, KOG4668, NADH dehydrogenase subunits 2, 5, and
related proteins [Energy production and conversion].
Length = 355
Score = 110 bits (275), Expect = 1e-24
Identities = 101/366 (27%), Positives = 175/366 (47%), Gaps = 19/366 (5%)
Query: 106 FEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVL 165
EF +L+ GML ++++N++I+ ++ E Y+L+ +K+ S EAA+KYF+
Sbjct: 4 NEFIFYILIPTAGMLILVTSNNLITMFVGWEGVGLCSYLLLG-FKKNPRSTEAAMKYFLT 62
Query: 166 GAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPF 225
S LL+GIS +Y +G G + ++++L+ K A PF
Sbjct: 63 NRAGSFILLFGISGLYLSSGLFGNEIGNNE--------YSSITLIILLIASGGKSAQAPF 114
Query: 226 HMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFM-CVSIGSMVL 284
H W+PD EG P ++A L++ + S+ S L+ + I SM+
Sbjct: 115 HFWLPDAMEG-PTPVSATLSSSKTLVIAGLALAVRSIPLLCSSPLIQQLKLILGILSMLF 173
Query: 285 GSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGML--GIVAMVRYMVIYLIMMIGFFSCI 342
G++ A+ Q D+K+++A+SSIG GY + GM I+ + + + ++ + + S I
Sbjct: 174 GALCALTQTDIKKILAFSSIGQLGYMMFSLKVGMSNNAILHLATHALFKALLFMCYGSII 233
Query: 343 LSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKR 402
L N Q+I ++GL L +L I L SL G+P AGF+ K +++ +A +
Sbjct: 234 HYL-----NLEQDIRLMSGLLNLPPLLKLSLFIGLLSLGGLPFLAGFYSKDYIIETAFQN 288
Query: 403 EFYVLAIVALLSSVISAYYYLRVISIMWFDQSTECVVVVAKEMRL-FIFGSILFVTGYFL 461
Y LA LL+SV+ YY M+F S + ++ + + + F + L
Sbjct: 289 NLYALAPTILLTSVLLTLYYSFRTGRMFFYTSNNWINKMSPLRLMNNLSLMMTFFSISSL 348
Query: 462 IENILN 467
I N L
Sbjct: 349 IPNFLM 354
>gnl|CDD|177202 MTH00144, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 328
Score = 109 bits (275), Expect = 1e-24
Identities = 82/318 (25%), Positives = 145/318 (45%), Gaps = 35/318 (11%)
Query: 112 MLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSA 171
+ + V+G L +S++ + ++ LE+ L+ K E+ +KYF++ + S+
Sbjct: 10 LFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYK-KKSSESESVVKYFIIQSLGSS 68
Query: 172 FLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPD 231
L++G +Y + + L+L+GL K+ L PFH W+P
Sbjct: 69 LLIFGSLIMYNLSF-------------------SWFSMSLLLLGLCLKLGLFPFHFWVPS 109
Query: 232 VYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIR 291
V G L T K A L ++W L + +S+ S ++GS+ +
Sbjct: 110 VMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYW-----LAYLLCVISVLSALVGSIGGLN 164
Query: 292 QKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGN 351
Q ++ L+AYSSI H G+ L+ + G M Y +IY++ F SL D
Sbjct: 165 QTQVRALLAYSSISHTGWMLVAI---LHGSWLMWMYFLIYIVSSGFLF---FSLWSGDSG 218
Query: 352 NIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVA 411
+++++ L + + + L SL G+PPF GF K +LIS+++ +L ++
Sbjct: 219 SMKDLGSLKPSYKTGLSIIS----LLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLL 274
Query: 412 LLSSVISAYYYLRVISIM 429
LL S+IS ++YL V
Sbjct: 275 LLGSLISLFFYLSVFFSS 292
>gnl|CDD|177174 MTH00112, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 346
Score = 103 bits (260), Expect = 9e-23
Identities = 83/320 (25%), Positives = 144/320 (45%), Gaps = 35/320 (10%)
Query: 109 PVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAF 168
+I +LG + IS+N + + LE+ + A+ LI+ + EAA KYF+ A
Sbjct: 7 LIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLIS-KPHHPRATEAATKYFLTQAA 65
Query: 169 SSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMW 228
+SA +L+ + TG +Q+ L+ + L K+ L PFH W
Sbjct: 66 ASALILFSSTTNAWNTGQWDITQLTNPT-----------SCTLLTLALAMKLGLAPFHFW 114
Query: 229 IPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVV 288
+P+V +GS L+T K A + L +TS L+ + + ++I S ++G
Sbjct: 115 LPEVLQGSTTTTALILSTWQKLA-PLTLLLMTS---NSLN--PTLLLTLAILSTLIGGWG 168
Query: 289 AIRQKDLKRLMAYSSIGHAGYALIGFSTG----MLGIVAMVRYMVIYLIMMIGFFSCILS 344
+ Q L+++MA+SSI H G+ + + +L IY++M F + +
Sbjct: 169 GLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTF-------YIYILMTTPMFLTLNT 221
Query: 345 LRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREF 404
K + D+ + L L + L SLAG+PP GF K+ +L K+
Sbjct: 222 TSTK------TLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNM 275
Query: 405 YVLAIVALLSSVISAYYYLR 424
A + + S++S ++YLR
Sbjct: 276 TPTATIMAMLSLLSLFFYLR 295
>gnl|CDD|177116 MTH00041, ND2, NADH dehydrogenase subunit 2; Validated.
Length = 349
Score = 102 bits (256), Expect = 3e-22
Identities = 80/310 (25%), Positives = 149/310 (48%), Gaps = 27/310 (8%)
Query: 116 VLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLY 175
+LG + +IS+N ++ LEL + ++ +++ N S+EA +KYF++ AFS+A LL
Sbjct: 14 ILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPR-SVEATIKYFLVQAFSAAILLN 72
Query: 176 GISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEG 235
G +G S I + + ++I + L K+ L P H W PDV +G
Sbjct: 73 GALIQAWLSG---------SWSIN--GPLNTLSSIIITLALALKLGLAPCHFWFPDVLQG 121
Query: 236 SPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDL 295
P +AT K A + L I++ I + I S+++G + Q
Sbjct: 122 LPFLQGLIIATWQKIAPLILLISISN------LLNSNILILCGILSVLVGGWGGLNQTQT 175
Query: 296 KRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQN 355
++++A+SSI H G+ +I + + M +IY+I+ F I + ++
Sbjct: 176 RKILAFSSIAHLGWIIITSAYSPNASIIM---FLIYIIINTSIF-LIGNN-----FSLST 226
Query: 356 ISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSS 415
+S L LS+ + + + SL G+PP GF K+ L ++ +++I+ ++ S
Sbjct: 227 LSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGS 286
Query: 416 VISAYYYLRV 425
++S ++YLR+
Sbjct: 287 LLSLFFYLRI 296
>gnl|CDD|31213 COG1009, NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain
L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy
production and conversion / Inorganic ion transport and
metabolism].
Length = 606
Score = 98.8 bits (246), Expect = 3e-21
Identities = 110/440 (25%), Positives = 195/440 (44%), Gaps = 25/440 (5%)
Query: 17 IIIAFGILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPY--------------E 62
+II ++ L+ + R + + L L LI+
Sbjct: 3 LIILLPLIGALIALLLGRTGRRLAAWLALLAPLVSLLLSALILFIVLAGPVLVTLYTWLP 62
Query: 63 GIGLGGAYISDRFSYFIKAILLMSSIIIFIKMFSCIYV-KPFSCFEFPVIMLMAVLGMLC 121
GL D S + LL++ + I ++S Y+ F +L+ ML
Sbjct: 63 SGGLNFGLRIDGLSLLM--ALLVTGVGFLIHLYSIGYMSHDPGLGRFFAYLLLFTGSMLG 120
Query: 122 MISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIY 181
++ +++++ ++ EL A Y+LI + AA K F++ LL GI +Y
Sbjct: 121 LVLSDNLLLLFVFWELTGLASYLLIGFWYSRPSARRAARKAFLVTRVGDLGLLLGIILLY 180
Query: 182 GFTGCTGFSQI--ATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMF 239
TG T S+ A +LF +L + ++L+L+G F K A PFH W+PD EG P
Sbjct: 181 LLTGTTLLSEELFAAALFADISPPLLTLILLLLLLGAFGKSAQFPFHTWLPDAMEG-PTP 239
Query: 240 MTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLM 299
++A L + L S + + L + + V + +L +++A+ Q D+KR++
Sbjct: 240 VSALLHAATMVKAGVYLLARLSPLFALSPEALWLVILVGAVTALLAALIALVQNDIKRIL 299
Query: 300 AYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDL 359
AYS+I GY + G L A + ++V + F S+ ++I L
Sbjct: 300 AYSTISQLGYMFVALGLGSLAYEAAIFHLVTHAFFKALLFLSAGSVIH--ATGTRDIRKL 357
Query: 360 AGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGK---YFLLISAVKREFYVLAIVALLSSV 416
GL ++ A I +LAG+PPFAGFF K ++A +L ++AL+ ++
Sbjct: 358 GGLRKKMPITFVAFLIGALALAGVPPFAGFFSKDMILEAALAASHLSGGLLLLLALIGAL 417
Query: 417 ISAYYYLRVISIMWFDQSTE 436
++A+Y R+I +++F + E
Sbjct: 418 LTAFYSFRLIFLVFFGKPRE 437
>gnl|CDD|177142 MTH00070, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 346
Score = 93.8 bits (234), Expect = 1e-19
Identities = 82/275 (29%), Positives = 136/275 (49%), Gaps = 26/275 (9%)
Query: 155 SIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILV 214
+ EAA KYF+ A +SA +L+ + FTG + T L +++ +
Sbjct: 52 ATEAATKYFLTQASASALILFSSTINAWFTGEWTIMNMQTPL-----------PTIMLTI 100
Query: 215 GLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIF 274
L K+ + PFH W+P+V +G + L+T K A MAL S +L+ L I
Sbjct: 101 ALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAP-MALLIQIS---HLLNSNLLII 156
Query: 275 MCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIM 334
M + S ++G + Q L+++MAYSSI H G+ +I + + ++ + IYLIM
Sbjct: 157 M--GLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILT--FSPHLTLLNLL-IYLIM 211
Query: 335 MIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYF 394
F +++L N NI+ L+ ++ LT + + L SL G+PP GF K+
Sbjct: 212 TSSMFLMLMNL------NSTNINKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWL 265
Query: 395 LLISAVKREFYVLAIVALLSSVISAYYYLRVISIM 429
+L K+ LA + LS+++S ++YLR+ M
Sbjct: 266 ILQELTKQNLTTLATLMALSALLSLFFYLRLSYAM 300
>gnl|CDD|177216 MTH00160, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 335
Score = 91.0 bits (227), Expect = 7e-19
Identities = 80/325 (24%), Positives = 144/325 (44%), Gaps = 36/325 (11%)
Query: 112 MLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSA 171
+ ++G L IS+N +M LE+ + LI N+K++ S E++LKYF++ A +S
Sbjct: 11 LSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLI-SNKKNLMSSESSLKYFLIQALASI 69
Query: 172 FLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPD 231
LL+ I + + + +LI L K+ PFH W P+
Sbjct: 70 ILLFSIILNM-------LNLMLFNNISS----------MLINSSLLLKLGAAPFHFWFPE 112
Query: 232 VYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIR 291
V EG L T K A + L + + + ++ +L S ++G++ +
Sbjct: 113 VMEGLSWINCFILMTWQKIAPLILLSYLINNNFIIIIIIL---------SAIIGAIGGLN 163
Query: 292 QKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGN 351
Q L++++AYSSI H G+ L M+ + Y +IY I+ +
Sbjct: 164 QTSLRKILAYSSINHLGWMLSSM---MISENLWLIYFLIYSIISLSIILLFNK------F 214
Query: 352 NIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVA 411
NI ++ L + + + L + L SL G+PPF GF K+ ++ + + L +
Sbjct: 215 NIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFIL 274
Query: 412 LLSSVISAYYYLRVISIMWFDQSTE 436
++SS+I+ Y+YLR+ +
Sbjct: 275 IMSSLITLYFYLRISYSSLMLNYNK 299
>gnl|CDD|164587 MTH00011, ND2, NADH dehydrogenase subunit 2; Validated.
Length = 330
Score = 89.5 bits (222), Expect = 2e-18
Identities = 85/326 (26%), Positives = 149/326 (45%), Gaps = 44/326 (13%)
Query: 108 FPVIMLMA---VLGMLCMISANDMISFYMSLELQSFALYVLIA---MNRKSVFSIEAALK 161
FP + L + LG L +S+N+ + +M +EL + L+ MN++S EAA+K
Sbjct: 5 FPTMFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQES----EAAVK 60
Query: 162 YFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMA 221
YF+ A S LL G++ ++ F S + + +++LV L K+
Sbjct: 61 YFLAQALGSGLLLLGMTMMWSFP-----------------SLLKNITALMLLVSLMLKLG 103
Query: 222 LVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGS 281
+ P H W P V + L+T K A L TS +LP+ ++ S
Sbjct: 104 MAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTS------HNILPMMTSMAAMS 157
Query: 282 MVLGSVVAIRQKDLKRLMAYSSIGHAGY-ALIGFSTGMLGIVAMVRYMVIYLIMMIGFFS 340
+ G + + Q L+ L+AYSSIGH G+ +I + + I+ + Y++I +M+ F
Sbjct: 158 ALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAY 217
Query: 341 CILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAV 400
N + + +S + +L I L SL G+PPF GF K + +
Sbjct: 218 L----------NAFSTKFNSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLT 267
Query: 401 KREFYVLAIVALLSSVISAYYYLRVI 426
++ +V ++ S+++ +YYL +I
Sbjct: 268 SNSMILILLVLIVGSLMNLFYYLNLI 293
>gnl|CDD|177167 MTH00105, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 347
Score = 86.8 bits (216), Expect = 1e-17
Identities = 80/322 (24%), Positives = 157/322 (48%), Gaps = 33/322 (10%)
Query: 108 FPVIMLMAVLG-MLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLG 166
+I L LG M+ MIS++ +++ ++ LE+ A+ + I M + + S EAA KYF+
Sbjct: 6 LIIIYLTLFLGTMITMISSHWLLA-WIGLEMNMLAI-IPILMKKHNPRSTEAATKYFLTQ 63
Query: 167 AFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFH 226
A +S L+ I ++G +++ L+ + L K+ L PFH
Sbjct: 64 ATASMLLMMAIIINLMYSGQWTITKLTNPT-----------ASTLMTIALAMKLGLAPFH 112
Query: 227 MWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGS 286
W+P+V +G P+ L T K A L +I+ S + + ++I S+++G
Sbjct: 113 FWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISP------SINPNLLLTLAILSILIGG 166
Query: 287 VVAIRQKDLKRLMAYSSIGHAGY--ALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILS 344
+ Q L++++AYSSI H G+ A++ ++ + + ++IY+IM + F ++
Sbjct: 167 WGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTL-----TLLNLLIYIIMTLTMFMLLML 221
Query: 345 LRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREF 404
N+ L+ + +T + + L SL G+PP GF K+ ++ K
Sbjct: 222 ------NSSTTTLSLSHTWNKTPLMTSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNN 275
Query: 405 YVLAIVALLSSVISAYYYLRVI 426
+L + ++++++ Y+Y+R+I
Sbjct: 276 IILPTLMAITALLNLYFYMRLI 297
>gnl|CDD|40042 KOG4845, KOG4845, KOG4845, NADH dehydrogenase, subunit 4 [Energy
production and conversion].
Length = 452
Score = 83.0 bits (205), Expect = 2e-16
Identities = 86/409 (21%), Positives = 165/409 (40%), Gaps = 8/409 (1%)
Query: 22 GILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPYEGIGLGGAYISDRFSYFIKA 81
G L L L +F + L + L + FL + +
Sbjct: 6 GSLMLFLPFLFISVNKLYWLCFKIIYFLLSTVPFLFNNFMNDLFFWISLFLGIDGLSFGL 65
Query: 82 ILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFA 141
++L + II I + S + F ++ L+ V ++ S++D++ FY+ EL
Sbjct: 66 LILTTFIIPLIILASEKGNNNYKKL-FLILSLILVFLLIITFSSSDLLMFYIFFELSLIP 124
Query: 142 LYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHR 201
VLI + AA + S LL GI +I + G F + + +
Sbjct: 125 TLVLILGWGSQPERLNAAYYFLFYTLLGSLPLLIGILYINNYGGSLNFLLLNLTSYPFVI 184
Query: 202 SFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITS 261
S ++ + +L+ KM + P H+W+P + +P + LA I T RI
Sbjct: 185 SILMYIA---LLLAFAVKMPIYPLHLWLPKAHVEAPTSGSMLLAGILLKLGTYGFLRINM 241
Query: 262 VFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIG-FSTGMLG 320
+ P+++ +S+ ++ S +RQ DLK+L+AYSS+ H G+ LIG S M G
Sbjct: 242 ILPSATLVHSPVWLVISLIGIIYTSSTCLRQTDLKKLIAYSSVSHMGFVLIGILSITMWG 301
Query: 321 IVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSL 380
++ + M+ + + F + G+ + GL + + +
Sbjct: 302 LIGSILLMIAHGLTSSALFCLAGVSYDRSGSRMMYFM--GGLFSSMPIMGTWFFLLSLAN 359
Query: 381 AGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVISIM 429
+PP + F G++ +L+ + ++A+ +++A Y L + +
Sbjct: 360 LALPPTSSFLGEFSVLVGIFSWSKIMFVLIAIG-MILTAAYSLYLYTSS 407
>gnl|CDD|177244 MTH00197, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 323
Score = 82.8 bits (205), Expect = 2e-16
Identities = 88/311 (28%), Positives = 146/311 (46%), Gaps = 36/311 (11%)
Query: 116 VLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLY 175
G+L +S+++ ++ +EL L++ N KS+ E A+KYF+ F SA LL
Sbjct: 8 FGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQN-KSITENEGAMKYFLFQEFGSALLLM 66
Query: 176 GISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEG 235
G S FS + SL VVL+++GL K+ PFH W+P V E
Sbjct: 67 GGSLS--------FSNLYLSLL----------SVVLVILGLLLKLGAFPFHFWVPSVMES 108
Query: 236 SPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDL 295
F LAT K A + L +S F + + +C S+ S ++G + + Q ++
Sbjct: 109 LSWFNCFLLATWQKLAPLLILAFNSSSF-------MGLLIC-SVLSSLIGGIGGMNQSNI 160
Query: 296 KRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQN 355
++L+AYSSIGH G+ L+ + + Y +IY ++M F + NN+ +
Sbjct: 161 RQLLAYSSIGHTGWMLMSL---VYSPSIFMLYYLIYFVIMFMLFLFLSK------NNLSS 211
Query: 356 ISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVALLSS 415
++ L + SL G+PP +GFF K+ +L S + ++ + +LS+
Sbjct: 212 LNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILST 271
Query: 416 VISAYYYLRVI 426
S YYYL +
Sbjct: 272 CFSLYYYLSLA 282
>gnl|CDD|164750 MTH00204, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 485
Score = 70.9 bits (174), Expect = 7e-13
Identities = 80/319 (25%), Positives = 142/319 (44%), Gaps = 8/319 (2%)
Query: 107 EFPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLG 166
EF + +L + ++ + S D++ FY+ E +++LI + + A+ +F
Sbjct: 113 EFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYT 172
Query: 167 AFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFH 226
S F+L GI +Y TG T + + L+VG L L K+ +PFH
Sbjct: 173 FAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQKWLLVGFFL---SLAVKIPQIPFH 229
Query: 227 MWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLL-PIFMCVSIGSMVLG 285
+W+P + +P+ + LA I R + +P S P+ + +S+ +++ G
Sbjct: 230 IWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYG 289
Query: 286 SVVAIRQKDLKRLMAYSSIGHAGYALIG-FSTGMLGIVAMVRYMVIYLIMMIGFFSCILS 344
S+ RQ D KRL+AYSS+ H G +G F+ + G+VA V M+ + + F +
Sbjct: 290 SLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTF 349
Query: 345 LRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREF 404
L + + I GL+ + + + G P F G++F L++A +
Sbjct: 350 LYERHHTRL--IKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYS- 406
Query: 405 YVLAIVALLSSVISAYYYL 423
L ++ V SA Y L
Sbjct: 407 LGLGVLVTSGMVWSAAYSL 425
>gnl|CDD|177193 MTH00135, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 347
Score = 69.4 bits (171), Expect = 2e-12
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 31/272 (11%)
Query: 156 IEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVG 215
+EA KYF+ A ++A +L+ + TG Q++ L +I +
Sbjct: 53 VEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQQMSHPLPT-----------TMITLA 101
Query: 216 LFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFM 275
L K+ L P H W+P+V +G + L+T K A + +I +L L
Sbjct: 102 LALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPTNPTLLITL----- 156
Query: 276 CVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALI--GFSTGMLGIVAMVRYMVIYLI 333
+ S ++G + Q L++++AYSSI H G+ ++ FS L ++A++ Y+I
Sbjct: 157 --GLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPS-LTLLALL----TYII 209
Query: 334 MMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKY 393
M S L+ + N+ I+ LA + LT + L SL G+PP GF K+
Sbjct: 210 MT---SSAFLTFKL---NSSTKINTLATSWTKAPALTALTPLILLSLGGLPPLTGFMPKW 263
Query: 394 FLLISAVKREFYVLAIVALLSSVISAYYYLRV 425
+L K++ + A +A LS+++S Y+YLR+
Sbjct: 264 LILQELTKQDLPLTATLAALSALLSLYFYLRL 295
>gnl|CDD|164762 MTH00217, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 482
Score = 66.2 bits (162), Expect = 2e-11
Identities = 88/359 (24%), Positives = 164/359 (45%), Gaps = 24/359 (6%)
Query: 77 YFIKAILLMSSIIIFIKMFSCIY-VKPF-SCFEFPVIMLMAVLGMLCMISANDMISFYMS 134
+F+ L++ I I I S + +K F C I+LM V +L D++ FY+
Sbjct: 84 FFLILTALLTPICILISWNSIKFLIKEFLLCLLVIEILLMGVFTIL------DLVGFYIL 137
Query: 135 LELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIAT 194
E ++++I + ++A+ +F S F+L GI +Y + G T + +
Sbjct: 138 FEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCC 197
Query: 195 SLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTM 254
+ + +G L L K+ +PFH+W+P + +P+ + LA +
Sbjct: 198 LKIEKELQYFIFLGFFL---SLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGY 254
Query: 255 ALCRITSVFWPMLSG----LLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYA 310
R + WP+L P+ +S+ +++ GS+ RQ DLKR++AYSS+ H G
Sbjct: 255 GFIRFS---WPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLV 311
Query: 311 LIG-FSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFL 369
+G FS + G+VA + M+ + ++ F + L + ++ + I G+
Sbjct: 312 TLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLY--ERHHTRLIKYYRGMVITMPLF 369
Query: 370 TCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAIVAL---LSSVISAYYYLRV 425
+ + + + A IP F G++ L++A + + V + +L LS+ S Y Y RV
Sbjct: 370 GILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRV 428
>gnl|CDD|177262 MTH00226, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 505
Score = 66.1 bits (161), Expect = 2e-11
Identities = 80/328 (24%), Positives = 144/328 (43%), Gaps = 18/328 (5%)
Query: 108 FPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGA 167
F + ML+ + + S D+ FY+ E +Y+++ + ++AA +F
Sbjct: 133 FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTL 192
Query: 168 FSSAFLLYGISFIYGFTGCTGFSQIATSLFI--GHRSFVLIVGVVLILVGLFFKMALVPF 225
S +L + +Y G T + +A+ + + +G+ L + K+ + PF
Sbjct: 193 IGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQTQKWIFLGIFLAMA---VKIPIFPF 249
Query: 226 HMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPML----SGLLPIFMCVSIGS 281
H+W+P + +P+ + LA I L R++ WP+L L P + + I
Sbjct: 250 HIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLS---WPILPLGAQNLAPAVIAMGIVG 306
Query: 282 MVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFST-GMLGIVAMVRYMVIYLIMMIGFFS 340
+V GS RQ D+KRL+AYSS+ H G I T ++G+ + M+ + I+ F
Sbjct: 307 IVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLF- 365
Query: 341 CILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAV 400
IL D ++ + I GLS + + + +PP F G+Y ++S+
Sbjct: 366 -ILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSF 424
Query: 401 KREFYVLAIV---ALLSSVISAYYYLRV 425
+ V +LS+V S Y+ RV
Sbjct: 425 NWNPIIGVFVCSGVILSAVYSFYFANRV 452
>gnl|CDD|177219 MTH00163, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 445
Score = 59.4 bits (145), Expect = 2e-09
Identities = 70/295 (23%), Positives = 129/295 (43%), Gaps = 9/295 (3%)
Query: 23 ILFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPYEGIGLGGAYISDRFSYFIKAI 82
+ LL + KN++ LV + LLS L + + + + D S+ + I
Sbjct: 5 LFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGL--I 62
Query: 83 LLMSSIIIFIKMFSC-IYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFA 141
LL I + + + S +Y K F ++L ++ +L S+ +++ FY+ E
Sbjct: 63 LLSFWICMLMILSSESVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIP 122
Query: 142 LYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHR 201
LI ++A + F+S LL GI ++Y +G F + +
Sbjct: 123 TLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLNFFGSLNFL 182
Query: 202 SFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITS 261
++ ++ L+ KM + H+W+P + +P+ + LA + L R+ S
Sbjct: 183 WYLSMILAFLV------KMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMS 236
Query: 262 VFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFST 316
F + I++ +S+ V+ S++ +RQ DLK L+AYSS+ H G L G T
Sbjct: 237 FFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMT 291
>gnl|CDD|177249 MTH00205, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 448
Score = 55.4 bits (134), Expect = 3e-08
Identities = 72/313 (23%), Positives = 134/313 (42%), Gaps = 16/313 (5%)
Query: 24 LFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPYEGIGLGGAYISDRFSY--FIKA 81
+F LL+ +F + + L + F + L ++IS FS+
Sbjct: 6 VFSLLIILFVLKFKDWSFF----SNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLP 61
Query: 82 ILLMSSIIIFIKMFSCIYV----KPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLEL 137
++++S I + + + V K F VIML+ +L +L N ++ FY++ E
Sbjct: 62 LIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLIL-ILSFSVDN-LLLFYITFEA 119
Query: 138 QSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLF 197
+LI ++A++ + +S LL G+ F+ F
Sbjct: 120 SLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNF 179
Query: 198 IGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALC 257
F+ + ++L K+ + H+W+P + +P+ + LA + L
Sbjct: 180 SDFYLFLYWIFLML---AFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLI 236
Query: 258 RITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIG-FST 316
RITS+ + + S +F +S+ V+ ++ +RQ DLK L+AYSS+GH G ++G FS
Sbjct: 237 RITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSN 296
Query: 317 GMLGIVAMVRYMV 329
G+ + MV
Sbjct: 297 TSWGMNGAIIMMV 309
>gnl|CDD|164589 MTH00014, ND4, NADH dehydrogenase subunit 4; Validated.
Length = 452
Score = 55.5 bits (134), Expect = 3e-08
Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 5/294 (1%)
Query: 24 LFLLLMGVFSRRKNAFHLVVFPVCLLSIALFFLLIMPYEGIGLGGAYI-SDRFSYFIKAI 82
L LL+ + ++ L + LLS+ L + + SD S + +
Sbjct: 8 LISLLLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITL 67
Query: 83 LLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYMSLELQSFAL 142
L + ++ + F I+ + F +L+ L +L SA++++ FY+ E
Sbjct: 68 TLWITALMILASFK-IFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPT 126
Query: 143 YVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRS 202
LI ++A+ + +S LL I I+ + S
Sbjct: 127 LFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSL---SMLMSSMEPPSI 183
Query: 203 FVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSV 262
+++ + ++ ++ KM L H+W+P + +P+ + LA I L R++S+
Sbjct: 184 YLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSL 243
Query: 263 FWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFST 316
F + L F +S+ V+ S++ IRQ DLK L+AYSS+GH G G +
Sbjct: 244 FMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMS 297
>gnl|CDD|177250 MTH00206, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 450
Score = 51.1 bits (123), Expect = 7e-07
Identities = 59/316 (18%), Positives = 113/316 (35%), Gaps = 14/316 (4%)
Query: 19 IAFGILFLLLMGVFSRRKNAFHLV-VFPVCLLSIALFFLLIMPYEGIGLGGAYISDRFSY 77
I ++ LLLM + S++K + F + + L + G Y+S
Sbjct: 2 ILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLS 61
Query: 78 FI----KAILLMSSIIIFIKMFSCIYVKPFSCFEFPVIMLMAVLGMLCMISANDMISFYM 133
LL + + + +I+L L + S+++++ FY+
Sbjct: 62 SPLVILSCWLLPLMFLASQNHMKNEPINRQRIYITLLIVLQLFL--ILFFSSSNLLLFYI 119
Query: 134 SLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIA 193
E +LI + A + S LL + F+ G +
Sbjct: 120 LFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILY 179
Query: 194 TSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATT 253
S + + + +L K+ L H+W+P + +P+ + LA +
Sbjct: 180 FSKLTTWNNNLWWLACIL---AFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGG 236
Query: 254 MALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYA--- 310
+ RI + P F+ + + ++ S + +RQ DLK L+AYSS+ H
Sbjct: 237 YGMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAG 296
Query: 311 -LIGFSTGMLGIVAMV 325
L G G G + ++
Sbjct: 297 ILSGSPWGFKGALLLM 312
>gnl|CDD|164604 MTH00032, ND5, NADH dehydrogenase subunit 5; Provisional.
Length = 669
Score = 48.4 bits (115), Expect = 4e-06
Identities = 78/342 (22%), Positives = 141/342 (41%), Gaps = 35/342 (10%)
Query: 79 IKAILLMSSIIIFIKMFSCIY------VKPFSCFEFPVIMLMAVLGMLCMISANDMISFY 132
+ +L++SSI + ++S Y V F C+ LM VL +++++ + +
Sbjct: 83 VTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVL-----VTSDNYLQLF 137
Query: 133 MSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQI 192
+ E Y+L+A + + +AA+K V+ ++ G+ IY G F
Sbjct: 138 IGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTF 197
Query: 193 ATSLF---IGHRSFV------------LIVGVVLILVGLFFKMALVPFHMWIPDVYEGSP 237
I R + I+G+ L+L+G K A + H W+PD EG
Sbjct: 198 NGGSVGSGIMDRGYYGGGAYESPLAPFAIIGI-LLLIGCIGKSAQLGLHTWLPDAMEGPT 256
Query: 238 MFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKR 297
A A + R +F LL I + ++ + + V + Q DLK+
Sbjct: 257 PVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGAL-TAFFAATVGLVQNDLKK 315
Query: 298 LMAYSSIGHAGYA--LIGFS-TGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQ 354
++AYS+ GY +IG + +G+ +V + ++ + S I S + Q
Sbjct: 316 VIAYSTCSQLGYMVLIIGIEGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTVDE----Q 371
Query: 355 NISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLL 396
++ + GL F + I FS+ G+P GF+ K +L
Sbjct: 372 DMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
>gnl|CDD|177119 MTH00044, ND4, NADH dehydrogenase subunit 4; Validated.
Length = 458
Score = 47.7 bits (114), Expect = 7e-06
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 1/197 (0%)
Query: 124 SANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGISFIYGF 183
S+ ++I FY++ E +LI I+A L + F S LL + IY
Sbjct: 112 SSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSS 171
Query: 184 TGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPMFMTAF 243
+ + S + + ++ KM + FH+W+P + +P+ +
Sbjct: 172 SSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMI 231
Query: 244 LATIPKFATTMALCRITSVFW-PMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYS 302
LA I L R+ ++F P + + I + ++ S++ +RQ DLK L+AYS
Sbjct: 232 LAAILLKLGGYGLIRLINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYS 291
Query: 303 SIGHAGYALIGFSTGML 319
S+GH G +G
Sbjct: 292 SVGHMSLVAAGIFSGTN 308
>gnl|CDD|177186 MTH00127, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 459
Score = 46.5 bits (110), Expect = 1e-05
Identities = 73/324 (22%), Positives = 128/324 (39%), Gaps = 22/324 (6%)
Query: 111 IMLMAVLGMLCMI--SANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAF 168
I L+ L + ++ A ++I FY+ E ++I + A +
Sbjct: 97 ITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLA 156
Query: 169 SSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMW 228
S LL + + TG + S + S+ + L+ KM L H+W
Sbjct: 157 GSLPLLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLW 216
Query: 229 IPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVV 288
+P + +P+ + LA + + R+ + P+ L F+ +++ +++ +
Sbjct: 217 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSI 276
Query: 289 AIRQKDLKRLMAYSSIGH----AGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFF---SC 341
+RQ DLK L+AYSS+ H AG LI G G LI+MI S
Sbjct: 277 CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGA----------LILMIAHGLTSSA 326
Query: 342 ILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLA--GIPPFAGFFGKYFLLISA 399
+ L + + + L Q I A F+ SLA +PP G+ ++ S
Sbjct: 327 LFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSL 386
Query: 400 VKREFYVLAIVALLSSVISAYYYL 423
+ LA+ L ++I+A Y L
Sbjct: 387 FNWSPWTLALTG-LGTLITAGYSL 409
>gnl|CDD|177207 MTH00150, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 417
Score = 45.2 bits (108), Expect = 4e-05
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 11/169 (6%)
Query: 170 SAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWI 229
S LL I ++ G S + + + + +L+ + K+ + PFH+W+
Sbjct: 119 SLPLLLVILWMSSSYGS---SFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWL 175
Query: 230 PDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVA 289
P + +P+ + LA I + R+ VF S + +S+ VL S++
Sbjct: 176 PKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLIC 235
Query: 290 IRQKDLKRLMAYSSIGHAGYALIG-FSTGMLGIVAMVRYMVIYLIMMIG 337
+RQ D+K L+AYSS+GH L G S G V LIMM+
Sbjct: 236 LRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGA-------LIMMVS 277
>gnl|CDD|164593 MTH00020, ND5, NADH dehydrogenase subunit 5; Reviewed.
Length = 610
Score = 45.1 bits (107), Expect = 5e-05
Identities = 64/311 (20%), Positives = 137/311 (44%), Gaps = 10/311 (3%)
Query: 119 MLCMISANDMISFYMSLELQSFALYVLIAMNRKSVFSIEAALKYFVLGAFSSAFLLYGIS 178
M+ ++++++ + ++ E Y+LI + + +AA+K ++ LL +
Sbjct: 124 MVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMF 183
Query: 179 FIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPM 238
++ G FS + + S + ++ + + +G K A + H W+PD EG P
Sbjct: 184 LLWDRFGSLDFSSVFNMVVSAPSSDITLI-CLFLFIGAVGKSAQLGLHTWLPDAMEG-PT 241
Query: 239 FMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRL 298
++A + + L +S + L I V ++ + V + Q DLK++
Sbjct: 242 PVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKV 301
Query: 299 MAYSSIGHAGYALI--GFSTGMLGIVAMVRYMVIYLIMMIGFFSCILSLRRKDGNNIQNI 356
+AYS+ GY ++ G S + + ++ + ++ + S I +L ++ Q++
Sbjct: 302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHAL-----SDEQDM 356
Query: 357 SDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISAVKREFYVLAI-VALLSS 415
+ GL I SL G P GF+ K +L A + + + A + S+
Sbjct: 357 RKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSA 416
Query: 416 VISAYYYLRVI 426
+++A+Y +R+I
Sbjct: 417 LLTAFYSIRLI 427
>gnl|CDD|176954 CHL00011, ndhD, NADH dehydrogenase subunit 4.
Length = 498
Score = 43.4 bits (103), Expect = 1e-04
Identities = 53/214 (24%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 108 FPVIMLMAVLGMLCMISANDMISFYMSLELQSFALYVLIAM--NRKSVFSIEAALKYFVL 165
F +ML G + + S+ D++ F++ EL+ +Y+L++M +K ++S A K+ +
Sbjct: 114 FYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYS---ATKFILY 170
Query: 166 GAFSSAFLLYGISFI--YGFTGCTGFSQIATSLFIGHRSFVLIVGVVL---ILVGLFFKM 220
A S FLL G+ + YG T + + ++S+ + + ++ L+ K+
Sbjct: 171 TAGGSIFLLIGVLGMGLYGSNEPTLNFET-----LANQSYPVALEILFYIGFLIAYAVKL 225
Query: 221 ALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLL-PIFMCVSI 279
++P H W+PD + + LA I L RI P + P + V
Sbjct: 226 PIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGA 285
Query: 280 GSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIG 313
++ + ++ Q++LK+ +AYSS+ H G+ +IG
Sbjct: 286 IQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIG 319
>gnl|CDD|177172 MTH00110, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 459
Score = 42.6 bits (101), Expect = 2e-04
Identities = 29/88 (32%), Positives = 48/88 (54%)
Query: 219 KMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVS 278
KM L H+W+P + +P+ + LA I + RIT + P+ + F+ +S
Sbjct: 206 KMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPFLMLS 265
Query: 279 IGSMVLGSVVAIRQKDLKRLMAYSSIGH 306
+ M++ S + +RQ DLK L+AYSS+ H
Sbjct: 266 LWGMIMTSSICLRQTDLKSLIAYSSVSH 293
>gnl|CDD|177183 MTH00124, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 457
Score = 40.9 bits (97), Expect = 8e-04
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 258 RITSVFWPMLSGLLPIFMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAG 308
RIT + P+ + L F+ +++ ++ S++ +RQ DLK L+AYSS+ H G
Sbjct: 245 RITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMG 295
>gnl|CDD|176967 CHL00025, ndhF, NADH dehydrogenase subunit 5.
Length = 741
Score = 40.6 bits (96), Expect = 0.001
Identities = 47/148 (31%), Positives = 67/148 (45%), Gaps = 18/148 (12%)
Query: 173 LLYGISFIYGFTGCTGF---SQIATSLFIGHR--SFVLIVGVVLILVGLFFKMALVPFHM 227
LL GI Y TG F +I +L + + L+ +G K A P H+
Sbjct: 189 LLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHV 248
Query: 228 WIPDVYEGSPMFMTAFLATIPKFATTMALCRITSV--FWPMLSGLLPIFM----CVSIGS 281
W+PD EG T A I A TM I V P L ++P M + I +
Sbjct: 249 WLPDAMEGP----TPISALI--HAATMVAAGIFLVARLLP-LFIVIPYIMNLISLIGIIT 301
Query: 282 MVLGSVVAIRQKDLKRLMAYSSIGHAGY 309
+LG+ +A+ QKD+KR +AYS++ GY
Sbjct: 302 ALLGATLALAQKDIKRGLAYSTMSQLGY 329
>gnl|CDD|177140 MTH00068, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 458
Score = 38.7 bits (91), Expect = 0.003
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 219 KMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMAL-----CRITSVFWPMLSGLLPI 273
KM L H+W+P + +P+ + LA A + L RI+ + P+ L
Sbjct: 206 KMPLYGLHLWLPKAHVEAPIAGSMILA-----AVLLKLGGYGILRISILLTPLSKELSYP 260
Query: 274 FMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAG 308
F+ +++ +++ S++ +RQ DLK L+AYSS+ H G
Sbjct: 261 FIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMG 295
>gnl|CDD|177253 MTH00210, ND5, NADH dehydrogenase subunit 5; Provisional.
Length = 616
Score = 38.8 bits (91), Expect = 0.004
Identities = 85/336 (25%), Positives = 142/336 (42%), Gaps = 57/336 (16%)
Query: 173 LLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWIPDV 232
L+ + I G FS I++ L L + +L+ +G K A + H W+PD
Sbjct: 178 LVLAMIMILKEFGTLEFSTISSLLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDA 237
Query: 233 YEGSPMFMTAFLATIPKFATTMALCRITSVFWPMLSGLLPIFMCVSIGS---MVLGSVVA 289
EG P ++A + A TM VF + SG P+F + +LG++ A
Sbjct: 238 MEG-PTPVSALI-----HAATMV---TAGVFLIIRSG--PLFEGSPLALTIVTILGALTA 286
Query: 290 -------IRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMV-IYLIMMIGFFSC 341
+ Q DLK+++AYS+ GY M+ + + Y ++ +M FF
Sbjct: 287 FFAATVGVVQNDLKKVIAYSTCSQLGY--------MVMVCGISNYSTSLFHLMNHAFFKA 338
Query: 342 ILSLRRKDGNNIQNISD------LAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFL 395
+L L G+ I +SD + GL + F + I SL G P GF+ K +
Sbjct: 339 LLFL--SAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLI 396
Query: 396 LISAVKREFYVLAI-VALLSSVISAYYYLRVI-------------SIMWFDQSTECVVVV 441
L + + A + S++++A+Y +R+I + +S+ +
Sbjct: 397 LELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGVHESSWNITF- 455
Query: 442 AKEMRLFIFGSILFVTGYFLIENILNSSIMKIVMSL 477
+ L FGSI FV GY E +L++ I IV +
Sbjct: 456 --PLLLLAFGSI-FV-GYLGKEVVLSNVIPPIVPNS 487
>gnl|CDD|177254 MTH00211, ND5, NADH dehydrogenase subunit 5; Provisional.
Length = 597
Score = 33.0 bits (76), Expect = 0.16
Identities = 75/331 (22%), Positives = 144/331 (43%), Gaps = 35/331 (10%)
Query: 112 MLMAVLGMLCMISANDMISFYMSLELQSFALYVLIA--MNRKSVFSIEAALKYFVLGAFS 169
+L+ ++ ML ++SAN++ ++ E ++LI+ R + AAL+ +
Sbjct: 116 LLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANT--AALQAVIYNRIG 173
Query: 170 SAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLILVGLFFKMALVPFHMWI 229
LL + ++ SQ+ + L + ++ +L+ K A FH W+
Sbjct: 174 DIGLLLSMVWLLLNLNSWEISQL------FILNLDLTLFLLGLLLAAMGKSAQFGFHPWL 227
Query: 230 PDVYEGSPMFMTAFLATIPKFATTMA------LCRITSVFWPMLSGLLPIFMCVSIGSMV 283
P EG P ++A L ++TM L R++ +F +L + + +M+
Sbjct: 228 PSAMEG-PTPVSALL-----HSSTMVVAGVFLLIRLSPLF-QNNQLILGAVLLLGALTML 280
Query: 284 LGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIMMIGFFSCIL 343
G++ A+ Q D+K+++A+S+ G M+ + + I FF +L
Sbjct: 281 FGALCALTQNDIKKIVAFSTTSQLGLM-------MVTLGLNQPQLAFLHICTHAFFKAML 333
Query: 344 SLRR----KDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYFLLISA 399
+ NN Q+I + GLS+ F + L + +L G P +GFF K +L S
Sbjct: 334 FMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESM 393
Query: 400 VKREFYVLAIV-ALLSSVISAYYYLRVISIM 429
A++ LL++ ++A Y R+I +
Sbjct: 394 NGSYLNAWALLLTLLATSLTAAYSFRLIFLS 424
>gnl|CDD|177157 MTH00094, ND4, NADH dehydrogenase subunit 4; Provisional.
Length = 403
Score = 29.5 bits (67), Expect = 2.3
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 274 FMCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGML-----GIVAMVRYM 328
++ S+ M+L S + Q D K L AYSS+ H + L+ + G++ M+ +
Sbjct: 216 WIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHG 275
Query: 329 VIYLIM--MIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPF 386
+M +IG F I R I + +F ++ S +G+PP
Sbjct: 276 YTSTLMFYLIGEFYHISKSRL--------IYFMNSFFSSSMFFGLIFSLVFLSNSGVPPS 327
Query: 387 AGFFGKYFLLISAVKREFYVLAIVALLSSVISAYYYLRVI 426
FF + FL+IS + ++S YY L +I
Sbjct: 328 LSFFSE-FLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLI 366
>gnl|CDD|177252 MTH00209, ND5, NADH dehydrogenase subunit 5; Provisional.
Length = 564
Score = 27.7 bits (62), Expect = 6.7
Identities = 35/152 (23%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Query: 275 MCVSIGSMVLGSVVAIRQKDLKRLMAYSSIGHAGYALIGFSTGMLGIVAMVRYMVIYLIM 334
+ + + ++ S+ A + DLK+++A S++ G L+ S G+ +++ + +
Sbjct: 243 LLLGSLTTLMASMSANVESDLKKIIALSTLSQLG--LMMCSLGLNQPELAFFHLITHALF 300
Query: 335 MIGFFSCILSLRRKDGNNIQNISDLAGLSRQDIFLTCALTIFLFSLAGIPPFAGFFGKYF 394
F C ++ G++ Q+I + L Q + L I SL GIP AGF+ K
Sbjct: 301 KALLFICAGNIIHSHGHS-QDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDL 359
Query: 395 LLISAVKREFYVLAIVALLSSV-ISAYYYLRV 425
+L S ++ ++ ++ + S ++A Y +R+
Sbjct: 360 ILESMLESNMPIMTLILMFLSTSLTAAYSMRL 391
>gnl|CDD|34473 COG4864, COG4864, Uncharacterized protein conserved in bacteria
[Function unknown].
Length = 328
Score = 27.7 bits (61), Expect = 7.5
Identities = 10/37 (27%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 202 SFVLIVGVVLILVGLFFKMALVPFHMWIPDVYEGSPM 238
++I V++I + +FF VP +WI + G +
Sbjct: 5 GPIIIAVVIIIALAVFF--TFVPVGLWISALAAGVKV 39
>gnl|CDD|144305 pfam00654, Voltage_CLC, Voltage gated chloride channel. This
family of ion channels contains 10 or 12 transmembrane
helices. Each protein forms a single pore. It has been
shown that some members of this family form homodimers.
In terms of primary structure, they are unrelated to
known cation channels or other types of anion channels.
Three ClC subfamilies are found in animals. ClC-1 is
involved in setting and restoring the resting membrane
potential of skeletal muscle, while other channels play
important parts in solute concentration mechanisms in
the kidney. These proteins contain two pfam00571
domains.
Length = 346
Score = 27.1 bits (61), Expect = 10.0
Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 4/103 (3%)
Query: 153 VFSIEAALKYFVLGAFSSAFLLYGISFIYGFTGCTGFSQIATSLFIGHRSFVLIVGVVLI 212
S+ + +LG L G F+ + I + G+++
Sbjct: 156 PLSLLELPLFILLGILCG---LLGALFVRLLLKVERLFR-RLRKKIPPPLRPALGGLLVG 211
Query: 213 LVGLFFKMALVPFHMWIPDVYEGSPMFMTAFLATIPKFATTMA 255
L+GLF L + I + GS + L + KF T
Sbjct: 212 LLGLFLPEVLGGGYGLIQLLLNGSLPLLLLLLLLLLKFLATAL 254
Database: CddA
Posted date: Feb 4, 2011 9:38 PM
Number of letters in database: 6,263,737
Number of sequences in database: 21,609
Lambda K H
0.337 0.148 0.446
Gapped
Lambda K H
0.267 0.0736 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21609
Number of Hits to DB: 6,012,243
Number of extensions: 362159
Number of successful extensions: 2750
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2422
Number of HSP's successfully gapped: 462
Length of query: 478
Length of database: 6,263,737
Length adjustment: 97
Effective length of query: 381
Effective length of database: 4,167,664
Effective search space: 1587879984
Effective search space used: 1587879984
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 59 (26.5 bits)