HHsearch alignment for GI: 254780868 and conserved domain: pfam03099

>pfam03099 BPL_LplA_LipB Biotin/lipoate A/B protein ligase family. This family includes biotin protein ligase, lipoate-protein ligase A and B. Biotin is covalently attached at the active site of certain enzymes that transfer carbon dioxide from bicarbonate to organic acids to form cellular metabolites. Biotin protein ligase (BPL) is the enzyme responsible for attaching biotin to a specific lysine at the active site of biotin enzymes. Each organism probably has only one BPL. Biotin attachment is a two step reaction that results in the formation of an amide linkage between the carboxyl group of biotin and the epsilon-amino group of the modified lysine. Lipoate-protein ligase A (LPLA) catalyses the formation of an amide linkage between lipoic acid and a specific lysine residue in lipoate dependent enzymes. The unusual biosynthesis pathway of lipoic acid is mechanistically intertwined with attachment of the cofactor.
Probab=99.93  E-value=9.3e-26  Score=180.05  Aligned_cols=119  Identities=36%  Similarity=0.454  Sum_probs=92.6

Q ss_pred             EECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CHHCCCHHHHHHHHHHHH
Q ss_conf             81648568999999973999978999824467836799853166333341322353224---000210137799999999
Q gi|254780868|r   19 FDTISSTNDECMKRALSGDLGNLWIVASCQTAGRGRRDNKWISDKGNLYASLLLIDSIS---KDSLTLLSFAIAVAMRSV   95 (252)
Q Consensus        19 ~~~~~STn~~~~~~~~~~~~~~~~v~A~~Qt~GrGr~gr~W~s~~G~l~~S~~~~~~~~---~~~~~~l~~~~~~ai~~~   95 (252)
T Consensus         2 g~~~~st---~~~~~~~~~~~g~v~va~~QT~Gr----~~W~sp~g~l~~Si~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (124)
T pfam03099         2 GRRQKST---KEEVNLEGLEEGGVVVARRQTGGR----RVWHSPGGNLAYSLLLLPELKSFKPSDLPAYVLLLVLAVLEA   74 (124)
T ss_pred             CCCCCCH---HHHHHHHCCCCCCEEEEEEECCCC----CCEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             7221378---999727257659899997746899----721689998899999756556401778899999999999999


Q ss_pred             HHHHC-CCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             99744-542102462146506710221122223323225832676521544
Q gi|254780868|r   96 IASTL-PVGTDVKIKWPNDILVFQRKIAGILIETLNLKNGLQAVVVGIGLN  145 (252)
Q Consensus        96 l~~~~-~~~~~~~iKWPNDi~~~~kKi~GIL~E~~~~~~~~~~~viGiGiN  145 (252)
T Consensus        75 l~~~~~~~~~~~~iKWPNDi~~~~kKi~GiL~e~~~-~~~~~~~viGiGiN  124 (124)
T pfam03099        75 LGPKAGIPGIWVRIKWPNDVLVNGKKIAGILQEIRR-GGTLHHGTLGIGIN  124 (124)
T ss_pred             HHHHHCCCCCEEEECCCCCCEECCCEEEEEEEEECC-CCCCCEEEEEEEEC
T ss_conf             998631369627653865326889089999878204-89645799999619