HHsearch alignment of GI: 254780868 and MMDB domain: 1vqz_A_1-49_92-251
>1vqz_A (A:1-49,A:92-251) Lipoate-protein ligase, putative; NP_345629.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.99A {Streptococcus pneumoniae TIGR4}
Probab=98.80 E-value=4.5e-08 Score=69.45 Aligned_cols=117 Identities=15% Similarity=0.115 Sum_probs=81.2
Q ss_pred CCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 33334132235322400021013779999999999744542102462146506710221122223323225832676521
Q gi|254780868|r 63 KGNLYASLLLIDSISKDSLTLLSFAIAVAMRSVIASTLPVGTDVKIKWPNDILVFQRKIAGILIETLNLKNGLQAVVVGI 142 (252)
Q Consensus 63 ~G~l~~S~~~~~~~~~~~~~~l~~~~~~ai~~~l~~~~~~~~~~~iKWPNDi~~~~kKi~GIL~E~~~~~~~~~~~viGi 142 (252)
.|+|.+|++++.+...... -..++-.++++++.+ |+++.++|||||.+++|||+|....... ........|
T Consensus 49 ~GnLnySli~p~~~~~~~~---y~~l~~~I~~aL~~l---GI~a~~~g~nDI~i~gkKIsGsAq~~~~---~~~l~HgTI 119 (209)
T 1vqz_A 49 NNNLNYTIISKEDENKAFD---FKSFSTPVINTLAQL---GVKAEFTGRNDLEIDGKKFCGNAQAYIN---GRIXHHGCL 119 (209)
T ss_dssp CTEEEEEEEEECCTTCCCS---HHHHHHHHHHHHHHT---TCCEEEETTTEEEETTEEEEEEEEEEET---TEEEEEEEE
T ss_pred CCCEEEEEEECCCCCCHHH---HHHHHHHHHHHHHHH---CCCEEECCCCCCEECCCEEEEEEEEEEC---CEEEEEEEE
T ss_conf 6967999997365442200---999999999999973---4553871478740068188653343408---479998688
Q ss_pred CCCCC---------CCCCC--------CCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 54444---------46422--------33653210023-6778978999877799999999873
Q gi|254780868|r 143 GLNVK---------HCPVD--------TPYPVTSLQRE-GGCIDLKDIFSLLFQDVARVLDLWK 188 (252)
Q Consensus 143 GiNi~---------~~~~~--------~~~~~tsL~~~-~~~~~~~~l~~~l~~~l~~~~~~~~ 188 (252)
.++.+ .+++. .+..+|+|.+. +..++.+++...|++.+...+....
T Consensus 120 lvd~D~~~l~~~L~~~~ek~~~k~~~s~~~~vtsL~e~lg~~is~e~l~~aL~e~~~~~~~~~~ 183 (209)
T 1vqz_A 120 LFDVDLSVLANALKVSKDKFESKGVKSVRARVTNIINELPKKITVEKFRDLLLEYXKKEYPEXT 183 (209)
T ss_dssp ESSCCTTHHHHHBCCCSSCCEECSCCCCCCCBCCGGGTCSSCCCHHHHHHHHHHHHHHHCTTCE
T ss_pred EECCCHHHHHHHHCCCCCCHHHCCCCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 6069999999870899402022155534655421897748999999999999999998638775