HHsearch alignment of GI: 254780868 and MMDB domain: 2p5i_A_
>2p5i_A (A:) BH3822 protein; PFAM03099, structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 2.21A {Bacillus halodurans c-125}
Probab=96.99 E-value=0.00072 Score=43.26 Aligned_cols=125 Identities=18% Similarity=0.118 Sum_probs=78.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEE------E--CCCEEEECCCCCC
Q ss_conf 3679985316633334132235322400021013779999999999744542102462------1--4650671022112
Q gi|254780868|r 52 RGRRDNKWISDKGNLYASLLLIDSISKDSLTLLSFAIAVAMRSVIASTLPVGTDVKIK------W--PNDILVFQRKIAG 123 (252)
Q Consensus 52 rGr~gr~W~s~~G~l~~S~~~~~~~~~~~~~~l~~~~~~ai~~~l~~~~~~~~~~~iK------W--PNDi~~~~kKi~G 123 (252)
|-+.|..=+-.+|+|.+|++++.+.+.... ..--.+.-+++++++.+ |+++... | .||+.+++|||+|
T Consensus 90 R~tGGg~V~hd~g~l~~s~i~~~~~~~~~~-~~y~~~~~~i~~~L~~l---Gi~~~~~~~~~~~~~~~~di~~~gkKi~G 165 (288)
T 2p5i_A 90 RNSGGLAVVLDSGILNLSLVLKEEKGFSID-DGYELXYELICSXFQDH---REQIEAREIVGSYCPGSYDLSIDGKKFAG 165 (288)
T ss_dssp ESSCCCCEEECTTEEEEEEEEECCTTCCHH-HHHHHHHHHHHHHTC------CCCEECCCTTSSSCCTTCEEETTEEEEE
T ss_pred ECCCCCEEEECCCCEEEEEEEECCCCCCHH-HHHHHHHHHHHHHHHHC---CCCEEECCCCCCCCCCCCEEEECCEEEEE
T ss_conf 638996488669963899997367667889-99999999999999974---99607635556657775506778866999
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCCC-------------------------CCCCCCCCCC-CCCCCCHHHHHHHHH
Q ss_conf 22233232258326765215444446422-------------------------3365321002-367789789998777
Q gi|254780868|r 124 ILIETLNLKNGLQAVVVGIGLNVKHCPVD-------------------------TPYPVTSLQR-EGGCIDLKDIFSLLF 177 (252)
Q Consensus 124 IL~E~~~~~~~~~~~viGiGiNi~~~~~~-------------------------~~~~~tsL~~-~~~~~~~~~l~~~l~ 177 (252)
.=.-. .. ..++.+.-||+..+... .+...|++.+ .+..++.+++...+.
T Consensus 166 ~aq~~---~~--~~~l~h~sllv~~d~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~tsl~~~l~~~~~~~~v~~~l~ 240 (288)
T 2p5i_A 166 ISQRR---IR--GGVAVQIYLCVSGSGAERAKXIRTFYDKAVAGQPTKFVYPRIKPETXASLSELLGQPHNVSDVLLKAL 240 (288)
T ss_dssp EEEEE---ET--TEEEEEEEEECSSCHHHHHHHHHHHHHHHHTTSCCSSCCCCCCGGGBCCHHHHHTSCCCHHHHHHHHH
T ss_pred EEEEE---EC--CEEEEEEEEEEECCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHH
T ss_conf 76789---88--87999999998579999999972002545303465421454452234669998289999999999999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780868|r 178 QDVARVLD 185 (252)
Q Consensus 178 ~~l~~~~~ 185 (252)
..+...+.
T Consensus 241 ~~~~~~~~ 248 (288)
T 2p5i_A 241 XTLQQHGA 248 (288)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHCC
T ss_conf 99998488