HHsearch results for GI: 254780868 and protein with PDBid: 2cgh_A
>2cgh_A Biotin ligase; 1.8A {Mycobacterium tuberculosis} PDB: 3l1a_A 3l2z_A
Probab=100.00 E-value=0 Score=392.54 Aligned_cols=230 Identities=28% Similarity=0.430 Sum_probs=204.9
Q ss_pred EEEEEEECCCCHHHHHHHHHHCCCC-CCEEEEECCCCCCCCCCCCCCCCCCC-CCCCCCCCCC-CCCCHHCCCHHHHHHH
Q ss_conf 0499981648568999999973999-97899982446783679985316633-3341322353-2240002101377999
Q gi|254780868|r 14 FRYEFFDTISSTNDECMKRALSGDL-GNLWIVASCQTAGRGRRDNKWISDKG-NLYASLLLID-SISKDSLTLLSFAIAV 90 (252)
Q Consensus 14 ~~i~~~~~~~STn~~~~~~~~~~~~-~~~~v~A~~Qt~GrGr~gr~W~s~~G-~l~~S~~~~~-~~~~~~~~~l~~~~~~ 90 (252)
.++++|++++|||+++++++.++.. +|++|+|++||+||||+||.|+||+| |||||+++++ ..+....+.+++++++
T Consensus 30 ~~l~~~~~~~STN~~l~~~~~~~~~~~g~vviA~~Qt~GrGR~gr~W~Sp~g~~l~~S~~~~~~~~~~~~~~~lsl~~~l 109 (268)
T 2cgh_A 30 RQLDVVAQTGSTNADLLARAASGADIDGVVLIAEHQTAGRGRHGRGWAATARAQIILSVGVRVVDVPVQAWGWLSLAAGL 109 (268)
T ss_dssp CEEEEESCBSCHHHHHHHHHHTTCCCBTEEEEESCBC------------CTTSEEEEEEEEECTTSCGGGTTHHHHHHHH
T ss_pred CEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 32799966877899999998769998987999894367888599831479999389987735677646677788999999
Q ss_pred HHHHHHHHHCC-CCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC-CCCC
Q ss_conf 99999997445-421024621465067102211222233232258326765215444446422336532100236-7789
Q gi|254780868|r 91 AMRSVIASTLP-VGTDVKIKWPNDILVFQRKIAGILIETLNLKNGLQAVVVGIGLNVKHCPVDTPYPVTSLQREG-GCID 168 (252)
Q Consensus 91 ai~~~l~~~~~-~~~~~~iKWPNDi~~~~kKi~GIL~E~~~~~~~~~~~viGiGiNi~~~~~~~~~~~tsL~~~~-~~~~ 168 (252)
+++++++.+.. .+.+++||||||||+++||+||||+|... .++|||||||++..|.+.+.++|||...+ ..++
T Consensus 110 av~~al~~l~~~~~~~~~iKWPNDi~~~~kKl~GIL~E~~~-----~~vvIGIGINv~~~p~~~~~~~tsL~~~~~~~~~ 184 (268)
T 2cgh_A 110 AVLDSVAPLIAVPPAETGLKWPNDVLARGGKLAGILAEVAQ-----PFVVLGVGLNVTQAPEEVDPDATSLLDLGVAAPD 184 (268)
T ss_dssp HHHHHHGGGSSSCGGGEEEETTTEEEETTEEEEEEEEEEET-----TEEEEEEEEESCCC--------CCTGGGTCSSCC
T ss_pred HHHHHHHHHCCCCCCCEEEECCCHHHHHCCCEEEEEEEEEC-----CEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 99987777514876515884682565430112898777302-----4489999885765853554310015554454357
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECC-EEEEEEEEEECCCCCEEEECCCCCEEEEEE
Q ss_conf 7899987779999999987303556488999998752389779999799-389999998769874899969998999996
Q gi|254780868|r 169 LKDIFSLLFQDVARVLDLWKKDTGREEIMNLWRCFACGIGDLITIKLSY-GSILGRFVGVDDFGYLLLEEKKGCVRQIFT 247 (252)
Q Consensus 169 ~~~l~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~gk~V~i~~~~-~~~~G~~~gId~~G~L~i~~~~G~~~~i~s 247 (252)
++++++.++.++..++..|.+ ++..++++|++++.++|++|++...+ ..++|++.|||++|+|+|++ +|.++.|++
T Consensus 185 ~~~l~~~l~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~g~~v~v~~~~~~~~~G~~~gId~~G~L~l~~-~g~~~~i~s 261 (268)
T 2cgh_A 185 RNRIASRLLRELEARIIQWRN--ANPQLAADYRARSLTIGSRVRVELPGGQDVVGIARDIDDQGRLCLDV-GGRTVVVSA 261 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHTBSSTTSEEEEEETTTEEEEEEEEEECTTSCEEEEE-TTEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEECCCCEEEEEE-CCCEEEEEE
T ss_conf 889999999999999999862--37077999999986769958999679939999999999798299999-994999996
Q ss_pred EEEC
Q ss_conf 3110
Q gi|254780868|r 248 GDIF 251 (252)
Q Consensus 248 GeI~ 251 (252)
|||.
T Consensus 262 GeV~ 265 (268)
T 2cgh_A 262 GDVV 265 (268)
T ss_dssp SCCE
T ss_pred ECEE
T ss_conf 2689