HHsearch results for GI: 254780868 and protein with PDBid: 2dxu_A
>2dxu_A Biotin--[acetyl-COA-carboxylase] ligase; biotin biosynthesis, dimer, X-RAY diffraction, structural genomics, NPPSFA; HET: BT5; 1.28A {Pyrococcus horikoshii} PDB: 2dzc_A 2ejg_A* 2e3y_A* 2e41_A* 2e64_A 2ejf_A* 2zgw_A* 1wqw_A* 1wpy_A* 1wq7_A 1wnl_A* 1x01_A* 2dkg_A* 2dth_A* 2dti_A* 2dto_A* 2fyk_A* 2djz_A* 2hni_A 2e10_A ...
Probab=100.00 E-value=0 Score=379.21 Aligned_cols=223 Identities=31% Similarity=0.453 Sum_probs=194.3
Q ss_pred CCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHH
Q ss_conf 99970499981648568999999973999978999824467836799853166333341322353224000210137799
Q gi|254780868|r 10 NPYSFRYEFFDTISSTNDECMKRALSGDLGNLWIVASCQTAGRGRRDNKWISDKGNLYASLLLIDSISKDSLTLLSFAIA 89 (252)
Q Consensus 10 ~p~~~~i~~~~~~~STn~~~~~~~~~~~~~~~~v~A~~Qt~GrGr~gr~W~s~~G~l~~S~~~~~~~~~~~~~~l~~~~~ 89 (252)
..++.+++||++++|||++|++. ..+++++|+|++||+||||+||+|+||+||||||++++++.+....+.++++++
T Consensus 7 ~~~g~~i~~~~~~~STn~~a~~~---~~~~~~~v~A~~Qt~GrGR~gr~W~sp~G~l~~S~~~~~~~~~~~~~~l~~~~~ 83 (235)
T 2dxu_A 7 SIIGRRVIYFQEITSTNEFAKTS---YLEEGTVIVADKQTMGHGALNRKWESPEGGLWLSIVLSPKVPQKDLPKIVFLGA 83 (235)
T ss_dssp SSTTSEEEEESSBSCHHHHHHHS---CCCTTCEEEESCBSSCBCGGGCBCCCCTTSEEEEEEECCCSCGGGGGGHHHHHH
T ss_pred CHHCCEEEEECCCCCHHHHHHHC---CCCCCEEEEECCCCCCCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 03318699968778789999852---999983999896477878899844679997079865024576778999999999
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC-CCCCCC
Q ss_conf 9999999974454210246214650671022112222332322583267652154444464223365321002-367789
Q gi|254780868|r 90 VAMRSVIASTLPVGTDVKIKWPNDILVFQRKIAGILIETLNLKNGLQAVVVGIGLNVKHCPVDTPYPVTSLQR-EGGCID 168 (252)
Q Consensus 90 ~ai~~~l~~~~~~~~~~~iKWPNDi~~~~kKi~GIL~E~~~~~~~~~~~viGiGiNi~~~~~~~~~~~tsL~~-~~~~~~ 168 (252)
++++++++++ +.+++||||||||+++||+||||+|... .++|||||||+++.+ +.++||+.. .+..++
T Consensus 84 ~ai~~~l~~~---~~~~~iKWPNDi~~~~kKl~GIL~E~~~-----~~~viGiGiNl~~~~---~~~~tsl~~~~~~~~~ 152 (235)
T 2dxu_A 84 VGVVETLKEF---SIDGRIKWPNDVLVNYKKIAGVLVEGKG-----DKIVLGIGLNVNNKV---PNGATSMKLELGSEVP 152 (235)
T ss_dssp HHHHHHHHHT---TCCCEEETTTEEEETTEEEEEEEEEECS-----SCEEEEEEECSSSCC---CTTBCCHHHHHTSCCC
T ss_pred HHHHHHHHHC---CCCEEEECCCHHEECCCEEEEEEEEEEC-----CEEEEEEEEECCCCC---CCCHHHHHHHHHHCCC
T ss_conf 9987655521---7751587684021056411366554204-----569999977658779---9634119988620468
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEEEECCCCCEEEECCCCCEEEEEEE
Q ss_conf 78999877799999999873035564889999987523897799997993899999987698748999699989999963
Q gi|254780868|r 169 LKDIFSLLFQDVARVLDLWKKDTGREEIMNLWRCFACGIGDLITIKLSYGSILGRFVGVDDFGYLLLEEKKGCVRQIFTG 248 (252)
Q Consensus 169 ~~~l~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~gk~V~i~~~~~~~~G~~~gId~~G~L~i~~~~G~~~~i~sG 248 (252)
++++++.++.++..++..|.++ +++ .. .|...+.++|+.|++. .++.++|++.|||++|+|+|++++|+++.|++|
T Consensus 153 ~~~l~~~l~~~l~~~~~~~~~~-~~~-~~-~~~~~~~~~~~~v~~~-~~~~~~G~~~gi~~~G~L~i~~~~G~~~~i~sG 228 (235)
T 2dxu_A 153 LLSVFRSLITNLDRLYLNFLKN-PMD-IL-NLVRDNMILGVRVKIL-GDGSFEGIAEDIDDFGRLIIRLDSGEVKKVIYG 228 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-TTH-HH-HHHHHHBCCSSEEEC-----CCEEEEEEECTTSCEEEECTTSCEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHH-HH-HHHHHHHHCCCEEEEE-CCCEEEEEEEEECCCCEEEEEECCCCEEEEEEE
T ss_conf 6899999999999999999862-588-99-9998886549689993-798799999999999879999899979999998
Q ss_pred EE
Q ss_conf 11
Q gi|254780868|r 249 DI 250 (252)
Q Consensus 249 eI 250 (252)
||
T Consensus 229 eV 230 (235)
T 2dxu_A 229 DV 230 (235)
T ss_dssp SC
T ss_pred EE
T ss_conf 89