HHsearch results for GI: 254780868 and protein with PDBid: 2p0l_A
>2p0l_A Lipoate-protein ligase A; PFAM, lopoate-protein ligase A, structural genomics, protein structure initiative, PSI-2; 2.04A {Streptococcus agalactiae COH1} SCOP: d.104.1.3
Probab=97.26 E-value=0.00081 Score=41.98 Aligned_cols=167 Identities=14% Similarity=0.100 Sum_probs=89.5
Q ss_pred CCCCEEEEEEECCCCHH---HH-----HHHHHHCCC---------CCCEEEEECCCCC-------------------CCC
Q ss_conf 99970499981648568---99-----999997399---------9978999824467-------------------836
Q gi|254780868|r 10 NPYSFRYEFFDTISSTN---DE-----CMKRALSGD---------LGNLWIVASCQTA-------------------GRG 53 (252)
Q Consensus 10 ~p~~~~i~~~~~~~STn---~~-----~~~~~~~~~---------~~~~~v~A~~Qt~-------------------GrG 53 (252)
.+-|..+......+|+. .. +.+.+..+. .++++++-.+|+. =|=
T Consensus 9 ~~~p~~~~~~~~~~~~d~~~~~a~~e~ll~~v~~~~~~~il~~w~~~ptVvlG~~q~~~p~~e~~~~~l~~~Gi~vvrR~ 88 (288)
T 2p0l_A 9 AQLPVSIFKDYVTDAQDAEKPFIWTEVFLREINRSNQEIILHIWPMTKTVILGMLDRELPHLELAKKEIISRGYEPVVRN 88 (288)
T ss_dssp TTSCEEEEECCBCSGGGTTHHHHHHHHHHHHHHHSCSCEEEEECCBSSEEEECTTGGGCTTHHHHHHHHHTTTCEEEECT
T ss_pred HHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEC
T ss_conf 52738999731587546657668999999984046899789995479979989866657308887999998799789965
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCH-HCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE--------CCCEEEECCCCCCC
Q ss_conf 79985316633334132235322400-0210137799999999997445421024621--------46506710221122
Q gi|254780868|r 54 RRDNKWISDKGNLYASLLLIDSISKD-SLTLLSFAIAVAMRSVIASTLPVGTDVKIKW--------PNDILVFQRKIAGI 124 (252)
Q Consensus 54 r~gr~W~s~~G~l~~S~~~~~~~~~~-~~~~l~~~~~~ai~~~l~~~~~~~~~~~iKW--------PNDi~~~~kKi~GI 124 (252)
+.|..=+-.+|+|.+|++++...... .....--.++-.+.++++.+ |+++.... .|||.+++||++|.
T Consensus 89 sGGgaV~~d~G~l~~s~i~p~~~~~~~~i~~~y~~~~~~i~~aL~~l---Gi~a~~~~~~~~~c~g~~Dl~v~grKi~G~ 165 (288)
T 2p0l_A 89 FGGLAVVADEGILNFSLVIPDVFERKLSISDGYLIMVDFIRSIFSDF---YQPIEHFEVETSYCPGKFDLSINGKKFAGL 165 (288)
T ss_dssp TCCSCEEESTTEEEEEEEEESCC---CCHHHHHHHHHHHHHHHTTTS---CSCCEECCCTTSSSCCTTCEEETTEEEEEE
T ss_pred CCCCEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHC---CCCEEEECCCCCCCCCCCCEEECCEEEEEE
T ss_conf 89872898899559999961664457998999999999999999974---985178336787785755076888789998
Q ss_pred CCCCCCCCCCCEEEEEECCCCCCCC-----------------CCC--------CCCCCCCCCCC-CCCCCHHHHHHHHHH
Q ss_conf 2233232258326765215444446-----------------422--------33653210023-677897899987779
Q gi|254780868|r 125 LIETLNLKNGLQAVVVGIGLNVKHC-----------------PVD--------TPYPVTSLQRE-GGCIDLKDIFSLLFQ 178 (252)
Q Consensus 125 L~E~~~~~~~~~~~viGiGiNi~~~-----------------~~~--------~~~~~tsL~~~-~~~~~~~~l~~~l~~ 178 (252)
=- ... .. .++....|.++.. +.. .+...|+|.+. +..++.+++...++.
T Consensus 166 AQ-rr~--~~--~~l~hgtllv~~d~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~vtsL~~~lg~~~t~eev~~~l~~ 240 (288)
T 2p0l_A 166 AQ-RRI--KN--GIAVSIYLSVCGDQKGRSQMISDFYKIGLGDTGSPIAYPNVDPEIMANLSDLLDCPMTVEDVIDRMLI 240 (288)
T ss_dssp EE-EEE--TT--EEEEEEEEECSSCHHHHHHHHHHHHHHHHTTTCCSSCCCCCCTTSBCCHHHHTTCCCCHHHHHHHHHH
T ss_pred EE-EEE--CC--EEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEHHHHCCCCCCHHHHHHHHHH
T ss_conf 89-998--99--89999999985788999999877777411443343357875520024599972999999999999999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780868|r 179 DVARVL 184 (252)
Q Consensus 179 ~l~~~~ 184 (252)
.+....
T Consensus 241 ~~~~~~ 246 (288)
T 2p0l_A 241 SLKQVG 246 (288)
T ss_dssp HHHHHT
T ss_pred HHHHHC
T ss_conf 999865