HHsearch results for GI: 254780868 and protein with PDBid: 3a7r_A

>3a7r_A Lipoate-protein ligase A; adenylate-forming enzyme, lipoic acid, ATP-binding, cytoplasm, nucleotide-binding, transferase, lipoyl; HET: LAQ; 2.05A {Escherichia coli} PDB: 1x2h_A* 3a7a_A* 1x2g_A*
Probab=97.34  E-value=0.0079  Score=35.81  Aligned_cols=152  Identities=12%  Similarity=0.082  Sum_probs=87.3

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEE----CCCCCCCCCC
Q ss_conf             367998531663333413223532240002101377999999999974454210246214650671----0221122223
Q gi|254780868|r   52 RGRRDNKWISDKGNLYASLLLIDSISKDSLTLLSFAIAVAMRSVIASTLPVGTDVKIKWPNDILVF----QRKIAGILIE  127 (252)
Q Consensus        52 rGr~gr~W~s~~G~l~~S~~~~~~~~~~~~~~l~~~~~~ai~~~l~~~~~~~~~~~iKWPNDi~~~----~kKi~GIL~E  127 (252)
                      |-+.|..=+..+|++.+|++.+.+...     . -...-.++++++++   |+++.+.=.||+.++    +|||+|.=.-
T Consensus        70 R~sGGGaV~hd~g~l~~s~i~~~~~~~-----~-~~~~~~i~~aL~~l---Gi~a~~~~r~di~~~~~~~gkKIsGsAq~  140 (337)
T 3a7r_A           70 RSSGGGAVFHDLGNTCFTFMAGKPEYD-----K-TISTSIVLNALNAL---GVSAEASGRNDLVVKTVEGDRKVSGSAYR  140 (337)
T ss_dssp             CSSCSCCEEECTTEEEEEEEEETTTCC-----H-HHHHHHHHHHHHHT---TCCEEEETTTEEEECCTTSCEEEEEEEEE
T ss_pred             EECCCCEEEECCCCEEEEEEECCCCCC-----H-HHHHHHHHHHHHHH---CCCEEECCCCCCEECCCCCCEEEEEEEEE
T ss_conf             827972599789987999985675107-----8-99999999999981---97537778776200367898189987499


Q ss_pred             CCCCCCCCEEEEEECCCCC-------CCCCCC--------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---
Q ss_conf             3232258326765215444-------446422--------3365321002367789789998777999999998730---
Q gi|254780868|r  128 TLNLKNGLQAVVVGIGLNV-------KHCPVD--------TPYPVTSLQREGGCIDLKDIFSLLFQDVARVLDLWKK---  189 (252)
Q Consensus       128 ~~~~~~~~~~~viGiGiNi-------~~~~~~--------~~~~~tsL~~~~~~~~~~~l~~~l~~~l~~~~~~~~~---  189 (252)
                       ...+.-....-+-+-.|+       +..++.        .....|+|.+....++.+++...++..+...+..-..   
T Consensus       141 -~~~~~~l~hgtll~d~d~~~l~~~L~~~~~k~~~k~~~Sv~~rVtnL~e~~~~~~~e~~~~~l~~~f~~~~~~~~~~~~  219 (337)
T 3a7r_A          141 -ETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEAFFAHYGERVEAEI  219 (337)
T ss_dssp             -ECSSEEEEEEEEESSCCHHHHHHHTSCCCCEEEECSCCCCCCCBCCGGGTCTTCCHHHHHHHHHHHHHHHHTCCCCCEE
T ss_pred             -EECCEEEEEEEEECCCCHHHHHHHCCCCCHHHHHCCCCCHHHCCEEHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf             -9999999986863279989999861999221244056744624344999479999999999999999998465563598


Q ss_pred             -----CCCCH---HHHHHHHHHHHCCCCEEEE
Q ss_conf             -----35564---8899999875238977999
Q gi|254780868|r  190 -----DTGRE---EIMNLWRCFACGIGDLITI  213 (252)
Q Consensus       190 -----~~~~~---~i~~~~~~~~~~~gk~V~i  213 (252)
                           .....   ...+.|....+..|+.=.+
T Consensus       220 l~~~e~~~~~~~~~~~~~y~s~eW~yg~~P~f  251 (337)
T 3a7r_A          220 ISPNKTPDLPNFAETFARQSSWEWNFGQAPAF  251 (337)
T ss_dssp             ECTTSCCCCTTHHHHHHHHHSHHHHTTTSCCE
T ss_pred             ECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             26778652588999998728903227889755