HHsearch results for GI: 254780868 and protein with PDBid: 3a7r_A
>3a7r_A Lipoate-protein ligase A; adenylate-forming enzyme, lipoic acid, ATP-binding, cytoplasm, nucleotide-binding, transferase, lipoyl; HET: LAQ; 2.05A {Escherichia coli} PDB: 1x2h_A* 3a7a_A* 1x2g_A*
Probab=97.34 E-value=0.0079 Score=35.81 Aligned_cols=152 Identities=12% Similarity=0.082 Sum_probs=87.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEE----CCCCCCCCCC
Q ss_conf 367998531663333413223532240002101377999999999974454210246214650671----0221122223
Q gi|254780868|r 52 RGRRDNKWISDKGNLYASLLLIDSISKDSLTLLSFAIAVAMRSVIASTLPVGTDVKIKWPNDILVF----QRKIAGILIE 127 (252)
Q Consensus 52 rGr~gr~W~s~~G~l~~S~~~~~~~~~~~~~~l~~~~~~ai~~~l~~~~~~~~~~~iKWPNDi~~~----~kKi~GIL~E 127 (252)
|-+.|..=+..+|++.+|++.+.+... . -...-.++++++++ |+++.+.=.||+.++ +|||+|.=.-
T Consensus 70 R~sGGGaV~hd~g~l~~s~i~~~~~~~-----~-~~~~~~i~~aL~~l---Gi~a~~~~r~di~~~~~~~gkKIsGsAq~ 140 (337)
T 3a7r_A 70 RSSGGGAVFHDLGNTCFTFMAGKPEYD-----K-TISTSIVLNALNAL---GVSAEASGRNDLVVKTVEGDRKVSGSAYR 140 (337)
T ss_dssp CSSCSCCEEECTTEEEEEEEEETTTCC-----H-HHHHHHHHHHHHHT---TCCEEEETTTEEEECCTTSCEEEEEEEEE
T ss_pred EECCCCEEEECCCCEEEEEEECCCCCC-----H-HHHHHHHHHHHHHH---CCCEEECCCCCCEECCCCCCEEEEEEEEE
T ss_conf 827972599789987999985675107-----8-99999999999981---97537778776200367898189987499
Q ss_pred CCCCCCCCEEEEEECCCCC-------CCCCCC--------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---
Q ss_conf 3232258326765215444-------446422--------3365321002367789789998777999999998730---
Q gi|254780868|r 128 TLNLKNGLQAVVVGIGLNV-------KHCPVD--------TPYPVTSLQREGGCIDLKDIFSLLFQDVARVLDLWKK--- 189 (252)
Q Consensus 128 ~~~~~~~~~~~viGiGiNi-------~~~~~~--------~~~~~tsL~~~~~~~~~~~l~~~l~~~l~~~~~~~~~--- 189 (252)
...+.-....-+-+-.|+ +..++. .....|+|.+....++.+++...++..+...+..-..
T Consensus 141 -~~~~~~l~hgtll~d~d~~~l~~~L~~~~~k~~~k~~~Sv~~rVtnL~e~~~~~~~e~~~~~l~~~f~~~~~~~~~~~~ 219 (337)
T 3a7r_A 141 -ETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEAFFAHYGERVEAEI 219 (337)
T ss_dssp -ECSSEEEEEEEEESSCCHHHHHHHTSCCCCEEEECSCCCCCCCBCCGGGTCTTCCHHHHHHHHHHHHHHHHTCCCCCEE
T ss_pred -EECCEEEEEEEEECCCCHHHHHHHCCCCCHHHHHCCCCCHHHCCEEHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf -9999999986863279989999861999221244056744624344999479999999999999999998465563598
Q ss_pred -----CCCCH---HHHHHHHHHHHCCCCEEEE
Q ss_conf -----35564---8899999875238977999
Q gi|254780868|r 190 -----DTGRE---EIMNLWRCFACGIGDLITI 213 (252)
Q Consensus 190 -----~~~~~---~i~~~~~~~~~~~gk~V~i 213 (252)
..... ...+.|....+..|+.=.+
T Consensus 220 l~~~e~~~~~~~~~~~~~y~s~eW~yg~~P~f 251 (337)
T 3a7r_A 220 ISPNKTPDLPNFAETFARQSSWEWNFGQAPAF 251 (337)
T ss_dssp ECTTSCCCCTTHHHHHHHHHSHHHHTTTSCCE
T ss_pred ECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 26778652588999998728903227889755