HHsearch alignment for GI: 254780869 and conserved domain: TIGR02108
>TIGR02108 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B; InterPro: IPR011842 This entry describes coenzyme PQQ biosynthesis protein B, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases. Note that this gene appears to be required for PQQ in biosynthesis in Methylobacterium extorquens (under the name pqqG) and in Klebsiella pneumoniae but that the equivalent pqqV in Acinetobacter calcoaceticus is not necessary for heterologous expression of PQQ biosynthesis in Escherichia coli. Based on this latter finding, it is suggested that PqqB might be a transporter or a PQQ-dependent enzyme rather than a PQQ biosynthesis enzyme .; GO: 0006810 transport, 0018189 pyrroloquinoline quinone biosynthetic process.
Probab=95.81 E-value=0.068 Score=32.67 Aligned_cols=142 Identities=15% Similarity=0.185 Sum_probs=78.3
Q ss_pred CCCEEEEECCCCCCCCCHHHHHHH-CCCCEECCHHHHHHHHH-HHHHCCCCC-C--CCEEEECCCCEEEE-------CCE
Q ss_conf 246899605430121607888986-29977929999999999-998548865-5--62255175555776-------348
Q gi|254780869|r 67 NLMAIFITHAHEDHYGALHDLWSF-LHVPVYASPFAIGLLEA-KRVYERVSK-K--IPCISFQAGDKVDV-------GAF 134 (559)
Q Consensus 67 ~i~~i~iTH~H~DHiGalp~l~~~-~~~pIY~s~~t~~li~~-~~~~~~~~~-~--~~~~~i~~~~~~~~-------g~~ 134 (559)
T Consensus 80 pI~~V~Lt~g~iDH~tGLL~LREgq~pf~~yat~~Vlq~L~~GNp~F~~L~~~~Ggv~r~Pial~~~~~~~~~DG~~~gL 159 (314)
T TIGR02108 80 PIEGVVLTDGEIDHVTGLLSLREGQQPFTLYATEMVLQDLSDGNPIFNVLNHWNGGVRRQPIALDEKFEFKIKDGAAPGL 159 (314)
T ss_pred CEEEEEECCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 60478820662245641233303788514862715788875488602122522376544231158886743147789886
Q ss_pred EEEEEECCCCCCCCCEEEEEECCCEEEECCCCEECCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHH
Q ss_conf 99998556777765356798768179983340246776654238988998608788299996356457888777787999
Q gi|254780869|r 135 SIESVRVNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDSLCAIGNEGILALMCDSTNAMREGTCISEKGIK 214 (559)
Q Consensus 135 ~v~~~~~~Hsip~a~~~~I~t~~g~i~ytGDfk~d~~p~~g~~~d~~~l~~~~~~gv~~Li~esT~~~~~~~~~sE~~v~ 214 (559)
T Consensus 160 ~~t~f~vpgka----PlY~e~rs~-----~dl-------~g~~~--------~gdT~Gl~I~D~~~~k~~~YiPGca~vt 215 (314)
T TIGR02108 160 EFTAFAVPGKA----PLYSEHRSG-----EDL-------AGDPH--------PGDTLGLLIEDGKTGKRLFYIPGCAEVT 215 (314)
T ss_pred EEEEEECCCCC----CCCCCCCCC-----CCC-------CCCCC--------CCCEEEEEEEECCCCCEEEEECCCCCCC
T ss_conf 27356627777----757810035-----213-------68757--------8870489997536765478703566638
Q ss_pred HHHHHHHHHCCCCEEE-EEC
Q ss_conf 9999998627983999-941
Q gi|254780869|r 215 KNIYDIMKNAKGCVLV-TTF 233 (559)
Q Consensus 215 ~~i~~~~~~~~grViv-~~f 233 (559)
T Consensus 216 ~~L~a~~~~Ad~-v~fDGTl 234 (314)
T TIGR02108 216 DDLKARMAGADL-VFFDGTL 234 (314)
T ss_pred HHHHHHHHCCCE-EEECCCC
T ss_conf 688989861773-7754740