HHsearch results for GI: 254780869 and protein with PDBid: 1vjn_A
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; structural genomics, JCSG, PSI, protein structure initiative; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=98.95 E-value=4.6e-08 Score=75.50 Aligned_cols=121 Identities=21% Similarity=0.207 Sum_probs=81.0
Q ss_pred CCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCEEC
Q ss_conf 66069999517778648999776767888767502870795798766412468996054301216078889862997792
Q gi|254780869|r 18 GMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWSFLHVPVYA 97 (559)
Q Consensus 18 G~N~~~~~~~~~~~~~~iiiD~G~~fp~~~~~gid~iiPd~~~l~~~~~~i~~i~iTH~H~DHiGalp~l~~~~~~pIY~ 97 (559)
|-+|.+++. ++..|++|--... +|. -.|+ .++++|++||.|.||... .++
T Consensus 19 Ghs~~lIe~----~g~~ILiDP~~~~-----~~~--~~~~--------~~~D~VliSH~H~DH~~~--~~~--------- 68 (220)
T 1vjn_A 19 GHACFALEM----EGKTIVTDPFDES-----VGY--PIPN--------VTADVVTESHQHFDHNAH--HLV--------- 68 (220)
T ss_dssp ETTEEEEEE----TTEEEEESCCC------------CCCC--------CBCSEEECSSCC---CGG--GGC---------
T ss_pred ECCEEEEEE----CCEEEEECCCCCC-----CCC--CCCC--------CCCCEEEECCCCCCCCCH--HHC---------
T ss_conf 031999998----9999998999887-----789--8777--------878899966878676751--231---------
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCEEEEEEECCCCCC------CCCEEEEEECCCEEEECCCCEECCC
Q ss_conf 9999999999998548865562255175555776348999985567777------6535679876817998334024677
Q gi|254780869|r 98 SPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVNHSIP------ETMALVIRSPVGNIVHTGDWKLDDD 171 (559)
Q Consensus 98 s~~t~~li~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~v~~~~~~Hsip------~a~~~~I~t~~g~i~ytGDfk~d~~ 171 (559)
......+..+..+++++++|+.+++.|+-. .+++|+|+.++.+|+|+||-
T Consensus 69 -------------------~~~~~v~~~~g~~~~~~~~I~~v~a~H~~~~~~~~g~~~~~~ie~~g~~I~~~GDt----- 124 (220)
T 1vjn_A 69 -------------------KGNFRVIDRPGAYTVNGVKIKGVETFHDPSHGRERGKNIVFVFEGEGIKVCHLGDL----- 124 (220)
T ss_dssp -------------------BSSCEEECSSEEEEETTEEEEEEEEEEC-------CEEEEEEEEETTEEEEECTTC-----
T ss_pred -------------------CCCEEEECCCCEEEECCEEECCCCCEECCCCCCCCCCCEEEEEECCCEEEEEECCC-----
T ss_conf -------------------46269960456599798221243206518888547875799998499299996898-----
Q ss_pred CCCCCCCCHHHHHHCCCCCCEEEEEC
Q ss_conf 66542389889986087882999963
Q gi|254780869|r 172 AILGDVTDKDSLCAIGNEGILALMCD 197 (559)
Q Consensus 172 p~~g~~~d~~~l~~~~~~gv~~Li~e 197 (559)
+...+...+.++++ +|+++.-
T Consensus 125 ---~~~~~~~~~~~~~~--~Dva~lP 145 (220)
T 1vjn_A 125 ---GHVLTPAQVEEIGE--IDVLLVP 145 (220)
T ss_dssp ---CSCCCHHHHHHHCC--CSEEEEE
T ss_pred ---CCCCCHHHHHHHCC--CCEEEEE
T ss_conf ---88989999985289--7689994