HHsearch results for GI: 254780869 and protein with PDBid: 1vme_A
>1vme_A Flavoprotein; TM0755, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: MSE; 1.80A {Thermotoga maritima} SCOP: c.23.5.1 d.157.1.3
Probab=99.55 E-value=7e-12 Score=102.91 Aligned_cols=124 Identities=23% Similarity=0.233 Sum_probs=91.1
Q ss_pred EEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHH--HHCCCEEEEECCCCCCCCCHHHHHHHC--CCCE
Q ss_conf 069999517778648999776767888767502870795798766--412468996054301216078889862--9977
Q gi|254780869|r 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE--RKNLMAIFITHAHEDHYGALHDLWSFL--HVPV 95 (559)
Q Consensus 20 N~~~~~~~~~~~~~~iiiD~G~~fp~~~~~gid~iiPd~~~l~~~--~~~i~~i~iTH~H~DHiGalp~l~~~~--~~pI 95 (559)
|+|++. .++..+|||+|. +.. .+.+ ++.|++. .++|+.|++||.|.||+|+++.+++++ +++|
T Consensus 53 NsYLI~----~~~~~vLIDtg~--~~~----~~~~---l~~l~~~i~~~~I~yIi~TH~H~DH~Ggl~~l~~~~~~~~~i 119 (410)
T 1vme_A 53 NAYLVK----LNGANVLIDGWK--GNY----AKEF---IDALSKIVDPKEITHIIVNHTEPDHSGSLPATLKTIGHDVEI 119 (410)
T ss_dssp EEEEEE----CSSCEEEECCCC--GGG----HHHH---HHHHHHHSCGGGCCEEECSCCCHHHHTTHHHHHHHHCSCCEE
T ss_pred EEEEEE----ECCEEEEEECCC--HHH----HHHH---HHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 999999----799579991997--567----9999---999997579767689994939653775499999970999899
Q ss_pred ECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCEEEEEEECC-CCCCCCCEEEEEECCCEEEECCCC
Q ss_conf 92999999999999854886556225517555577634899998556-777765356798768179983340
Q gi|254780869|r 96 YASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVN-HSIPETMALVIRSPVGNIVHTGDW 166 (559)
Q Consensus 96 Y~s~~t~~li~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~v~~~~~~-Hsip~a~~~~I~t~~g~i~ytGDf 166 (559)
|+++.+..++..... ......++.++.+++|+.+++++++. |.-|+++.+. . ..++||||.
T Consensus 120 ~~~~~~~~~~~~~~~------~~~~~~v~~g~~l~lG~~~l~~i~~P~~H~p~~~~~y--~--~~iLFsgD~ 181 (410)
T 1vme_A 120 IASNFGKRLLEGFYG------IKDVTVVKDGEEREIGGKKFKFVMTPWLHWPDTMVTY--L--DGILFSCDV 181 (410)
T ss_dssp EECHHHHHHHHHHHC------CCCCEECCTTCEEEETTEEEEEEECTTSSSTTCEEEE--E--TTEEEEETT
T ss_pred EECHHHHHHHHHCCC------CCCCEEECCCCEEEECCEEEEEEECCCCCCCCCCCEE--E--CCEEEECCC
T ss_conf 978888642010167------6531683579999866726999978998889971021--2--898998863