HHsearch results for GI: 254780869 and protein with PDBid: 2i7x_A
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.98 E-value=4.8e-30 Score=233.57 Aligned_cols=310 Identities=14% Similarity=0.168 Sum_probs=199.3
Q ss_pred ECCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHH
Q ss_conf 40686834660699995177786489997767678887675028707957987664124689960543012160788898
Q gi|254780869|r 10 PLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHDLWS 89 (559)
Q Consensus 10 ~lGG~~eiG~N~~~~~~~~~~~~~~iiiD~G~~fp~~~~~gid~iiPd~~~l~~~~~~i~~i~iTH~H~DHiGalp~l~~ 89 (559)
+.+|.+ ..+|+++++ ++..||+|||....... + . -.+.++++....|++|||||+|.||+||||||++
T Consensus 8 ~~~g~~--~~~c~lL~~----d~~~ILlDcG~~~~~~~-~-~----~~~~~~~~~~~~IDaVllSHah~DH~GaLP~L~~ 75 (717)
T 2i7x_A 8 CDDGSG--TTVGSVVRF----DNVTLLIDPGWNPSKVS-Y-E----QCIKYWEKVIPEIDVIILSQPTIECLGAHSLLYY 75 (717)
T ss_dssp CCSSSS--SCCCEEEEE----TTEEEEECCCCCTTTSC-H-H----HHHHHHHTTGGGCCEEECCCSSHHHHTTHHHHHH
T ss_pred ECCCCC--CCEEEEEEE----CCEEEEEECCCCCCCCC-H-H----HHHHHHHCCCCCCCEEEECCCCHHHHCCHHHHHH
T ss_conf 148997--303899998----99799998998877677-4-4----5002211265658789977898677546689998
Q ss_pred H------CCCCEECCHHHHHHHHHHHHHC----CCCC--C---C----------CEEEECCCCEEEE----CCEEEEEEE
Q ss_conf 6------2997792999999999999854----8865--5---6----------2255175555776----348999985
Q gi|254780869|r 90 F------LHVPVYASPFAIGLLEAKRVYE----RVSK--K---I----------PCISFQAGDKVDV----GAFSIESVR 140 (559)
Q Consensus 90 ~------~~~pIY~s~~t~~li~~~~~~~----~~~~--~---~----------~~~~i~~~~~~~~----g~~~v~~~~ 140 (559)
. +++|||||+.|..|.+..+.+. .... + + .+.+++.++++.+ .+++|+|++
T Consensus 76 ~~~~~~g~~~pIYaT~pt~~L~~~~l~D~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~l~Y~q~~~l~~~~~gl~it~~~ 155 (717)
T 2i7x_A 76 NFTSHFISRIQVYATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYN 155 (717)
T ss_dssp HSHHHHHHTCEEEEEHHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEE
T ss_pred HCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEECCCCEEECCCCCCCEEEEEEE
T ss_conf 51323698888996689999999999999997531165556678999999998504894799859803788857999965
Q ss_pred CCCCCCCCCEEEEEECCCEEEECCCCEECCCCCCCCCCCHHH-----HHHCCCCCCEEEEECCCCCCCCCCC--CCHHHH
Q ss_conf 567777653567987681799833402467766542389889-----9860878829999635645788877--778799
Q gi|254780869|r 141 VNHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDVTDKDS-----LCAIGNEGILALMCDSTNAMREGTC--ISEKGI 213 (559)
Q Consensus 141 ~~Hsip~a~~~~I~t~~g~i~ytGDfk~d~~p~~g~~~d~~~-----l~~~~~~gv~~Li~esT~~~~~~~~--~sE~~v 213 (559)
++| ++|++++.|+.+.++|+|||||.....+..... ++.. +..+. ..++||+++++. ..... ..+..+
T Consensus 156 AGH-~LGsa~~~I~~~~~~IvytgD~n~~~~~~L~ga-~~~~~~~~~~~~l~--~~~~li~~t~~~-~~~~~~~~~~~~l 230 (717)
T 2i7x_A 156 AGV-CPGGSIWCISTYSEKLVYAKRWNHTRDNILNAA-SILDATGKPLSTLM--RPSAIITTLDRF-GSSQPFKKRSKIF 230 (717)
T ss_dssp CSS-STTCEEEEEECSSCEEEECSSCCSSCCSSCCCC-TTBCTTSCBCSTTS--SCSEEEECCSCC-CCSSCHHHHHHHH
T ss_pred CCC-CCCCEEEEEEECCEEEEEECCCCCCCCCEECCC-CCCCCCCCCCCCCC--CCCEEEEECCCC-CCCCCHHHHHHHH
T ss_conf 563-234269999829959999636788887300475-33455788643356--787899807788-8778869999999
Q ss_pred HHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHH-----------CCEEEEECHHHHHHHHHHHHC-CCC-------
Q ss_conf 9999999862798399994147789999999999871-----------886998448699999988742-876-------
Q gi|254780869|r 214 KKNIYDIMKNAKGCVLVTTFSSSVSRIRSIIDIAEQI-----------GRKIVLLGSSLKRVVSVAIDV-GII------- 274 (559)
Q Consensus 214 ~~~i~~~~~~~~grViv~~fasni~Ri~~i~~~a~~~-----------~R~v~i~Grs~~~~~~~a~~~-g~l------- 274 (559)
.+.+.+++++ .|.|++++|+ ++|+|+++..-... .-+|++.+..-.+.+..++.. .++
T Consensus 231 ~~~I~~tl~~-gG~VLIP~fa--~GR~qELl~~L~~~~~~~~~~~~~~~~PIyl~S~~a~~~~~~a~s~~Ewm~~~i~k~ 307 (717)
T 2i7x_A 231 KDTLKKGLSS-DGSVIIPVDM--SGKFLDLFTQVHELLFESTKINAHTQVPVLILSYARGRTLTYAKSMLEWLSPSLLKT 307 (717)
T ss_dssp HHHHHHHTST-TCEEEEEECT--TTHHHHHHHHHHHHHTTC-------CCCEEEECTTTTHHHHHHHTCGGGSCHHHHHH
T ss_pred HHHHHHHHHC-CCEEEEEECC--CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHCHHHHHH
T ss_conf 9999999977-9989997268--628999999999999861442578872089987789999999999998747898888
Q ss_pred -------CCC-----CCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHH
Q ss_conf -------776-----54226566223880208999966963268898852027776530268966999961588617789
Q gi|254780869|r 275 -------KKD-----QLFLSDESFGLYPREQLIVIATGSQGEPRSALAQLSRGEMRNVKLAEKDTVIFSSRAIPGNEVAI 342 (559)
Q Consensus 275 -------~~~-----~~~i~~~~~~~~p~~~~~ii~TGsqge~~a~l~ria~~~~~~i~l~~~D~vI~ss~~ipGnE~~~ 342 (559)
++. ..+...+++...|. -.+|+||+..|..+..|.++|.+ +..+|||..+..|+. .+.
T Consensus 308 fe~~~~~~pF~~~~~~~~~~~~el~~~~~-PkVVlas~~~G~s~~~l~~la~d--------~kN~VilT~~~~~~~-~~~ 377 (717)
T 2i7x_A 308 WENRNNTSPFEIGSRIKIIAPNELSKYPG-SKICFVSEVGALINEVIIKVGNS--------EKTTLILTKPSFECA-SSL 377 (717)
T ss_dssp HHSSSSCCTTCCTTTEEECCGGGGGGCCS-CEEEEEESCHHHHHHHHHHHSSC--------TTEEEEECSSCCTTC-HHH
T ss_pred HHHHCCCCCCCCCEEEECCCHHHHHHCCC-CCEEEEECCCCCHHHHHHHHCCC--------CCCEEEEECCCCCCC-HHH
T ss_conf 88645766534420421167988961789-84899808974099999997089--------986799946887752-156
Q ss_pred HHHHHHH
Q ss_conf 9999765
Q gi|254780869|r 343 GHIKNRL 349 (559)
Q Consensus 343 ~~~~n~l 349 (559)
.++.++.
T Consensus 378 ~~~~~~~ 384 (717)
T 2i7x_A 378 DKILEIV 384 (717)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 7899987