HHsearch results for GI: 254780869 and protein with PDBid: 2q9u_A
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.60 E-value=2.4e-13 Score=113.43 Aligned_cols=127 Identities=15% Similarity=0.146 Sum_probs=92.0
Q ss_pred EEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHH--HHCCCEEEEECCCCCCCCCHHHHHHHC-CCCEE
Q ss_conf 069999517778648999776767888767502870795798766--412468996054301216078889862-99779
Q gi|254780869|r 20 NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE--RKNLMAIFITHAHEDHYGALHDLWSFL-HVPVY 96 (559)
Q Consensus 20 N~~~~~~~~~~~~~~iiiD~G~~fp~~~~~gid~iiPd~~~l~~~--~~~i~~i~iTH~H~DHiGalp~l~~~~-~~pIY 96 (559)
|||++. +++.+|||+|.. .. .+.+ .+.|.+. .++|+.|++||.|.||+|+++.++..+ +++||
T Consensus 42 NsYLI~-----~e~~vLIDtg~~--~~----~~~~---l~~i~~~i~~~~I~~II~TH~H~DH~ggl~~l~~~~p~a~i~ 107 (414)
T 2q9u_A 42 NSYFID-----DECPTVIDSVKY--PF----AEEW---LSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHKFTNATFV 107 (414)
T ss_dssp CCEEEC-----SSSCEEECCCCG--GG----HHHH---HHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGGSTTCEEE
T ss_pred EEEEEE-----CCCEEEEECCCH--HH----HHHH---HHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 999996-----698899909980--16----9999---999997569877998996909664760299999878898799
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCEEEEEEECC--CCCCCCCEEEEEECCCEEEECCCCE
Q ss_conf 2999999999999854886556225517555577634899998556--7777653567987681799833402
Q gi|254780869|r 97 ASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRVN--HSIPETMALVIRSPVGNIVHTGDWK 167 (559)
Q Consensus 97 ~s~~t~~li~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~v~~~~~~--Hsip~a~~~~I~t~~g~i~ytGDfk 167 (559)
+++.+..+++.... ........++.++.+++|+.+++++++. | -||+. ++..+..+++||||.-
T Consensus 108 ~~~~~~~~~~~~~~----~~~~~~~~~~~g~~l~lg~~~l~~i~~p~gH-~~~~~--~~y~~~~~iLfsGD~~ 173 (414)
T 2q9u_A 108 CTKKCQEHLKILYG----MEKATWLIVDDKYTLKIGKRTLKFIPVPLLH-WPDST--FTYCPEDKILFSNDGF 173 (414)
T ss_dssp ECHHHHHHHHHHHC----CTTCCEEECCTTCCEECSSCEEEEEECTTSS-STTCE--EEEETTTTEEEEETTT
T ss_pred ECHHHHHHHHHHCC----CCCCCEEEECCCCEEEECCEEEEEECCCCCC-CCCCE--EEEECCCCCEEECCCC
T ss_conf 75899988887438----9865258715898897565589997036898-68978--9999898968945745