HHsearch results for GI: 254780869 and protein with PDBid: 3hnn_A
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, NSR435A, DFA5; 1.80A {Nostoc SP}
Probab=99.29 E-value=1.2e-10 Score=94.03 Aligned_cols=131 Identities=16% Similarity=0.186 Sum_probs=88.0
Q ss_pred CCCC--EEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHH--HHCCCEEEEECCCCCCCCCHHHHHHHC
Q ss_conf 3466--069999517778648999776767888767502870795798766--412468996054301216078889862
Q gi|254780869|r 16 EIGM--NMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKE--RKNLMAIFITHAHEDHYGALHDLWSFL 91 (559)
Q Consensus 16 eiG~--N~~~~~~~~~~~~~~iiiD~G~~fp~~~~~gid~iiPd~~~l~~~--~~~i~~i~iTH~H~DHiGalp~l~~~~ 91 (559)
|.|. |||++. +++.+|||+|.. ... +.+ +..+.+. .++|++|++||+|.||+|+++.++..+
T Consensus 38 ~~G~s~N~YlI~-----~d~~vLIDtG~~--~~~----~~~---l~~~~~~~~~~~I~~IilTH~H~DH~Ggl~~~~~~~ 103 (262)
T 3hnn_A 38 ERGTTSNSYVIE-----GDKTAIIDPPVE--SFM----KIY---LEALQQTVNLKKLDYVILGHFSPNRIPTFKALLELA 103 (262)
T ss_dssp CCCEEEEEEEEE-----SSSEEEECCCCH--HHH----HHH---HHHHHHHSCGGGEEEEECSSCCGGGHHHHHHHHHHC
T ss_pred CCCEEEEEEEEE-----CCCEEEEECCCH--HHH----HHH---HHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHC
T ss_conf 897188999993-----299999918975--579----999---999996378425889995997777762259999744
Q ss_pred -CCCEECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEC-CEEEEEEEC--CCCCCCCCEEEEEECCCEEEECCCCE
Q ss_conf -99779299999999999985488655622551755557763-489999855--67777653567987681799833402
Q gi|254780869|r 92 -HVPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVG-AFSIESVRV--NHSIPETMALVIRSPVGNIVHTGDWK 167 (559)
Q Consensus 92 -~~pIY~s~~t~~li~~~~~~~~~~~~~~~~~i~~~~~~~~g-~~~v~~~~~--~Hsip~a~~~~I~t~~g~i~ytGDfk 167 (559)
++++|+++.+..+++..+. ........+..++.+.++ +..+.+++. .| .|++.. +.-+..+++||||.-
T Consensus 104 p~~~v~~~~~~~~~l~~~~~----~~~~~~~~~~~gd~~~~~~g~~l~~i~~~~~H-~~~~~~--~y~~~~~vLftgD~~ 176 (262)
T 3hnn_A 104 PQITFVCSLPAAGDLRAAFP----DDNLNILPMRGKETLDLGKGHVLKFLPIPSPR-WPAGLC--TYDVQTQILYTDKIF 176 (262)
T ss_dssp TTCEEEECHHHHHHHHHHSS----SSCCEEEECCSSCEEECSTTCEEEEEECCCSS-CTTCEE--EEETTTTEEEEETTT
T ss_pred CCCEEEECHHHHHHHHHHHC----CCCCCCCEECCCCEEEECCCCEEEEEECCCCC-CCCCEE--EEECCCCEEEECCCC
T ss_conf 48579977899988876523----56643220025514762278237999668999-899629--998788869966634